RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 SPEF2Q9C093 1822 aa22.66■■□□□ 1.22
SMPD1-208ENST00000533123 METTL24Q5JXM2 366 aa22.66■■□□□ 1.22
SMPD1-208ENST00000533123 EAF2Q96CJ1 260 aaPredicted RBP22.66■■□□□ 1.22
SMPD1-208ENST00000533123 CEP126Q9P2H0 1117 aa22.66■■□□□ 1.22
SMPD1-208ENST00000533123 SRGNP10124 158 aa22.65■■□□□ 1.22
SMPD1-208ENST00000533123 POLD1P28340 1107 aa22.65■■□□□ 1.22
SMPD1-208ENST00000533123 GRAPQ13588 217 aa22.65■■□□□ 1.22
SMPD1-208ENST00000533123 AACSQ86V21 672 aa22.65■■□□□ 1.22
SMPD1-208ENST00000533123 HELBQ8NG08 1087 aaPredicted RBP22.65■■□□□ 1.22
SMPD1-208ENST00000533123 GRAPLQ8TC17 118 aaPredicted RBP22.65■■□□□ 1.22
SMPD1-208ENST00000533123 RBM17Q96I25 401 aaKnown RBP22.65■■□□□ 1.22
SMPD1-208ENST00000533123 BSDC1Q9NW68 430 aaPredicted RBP22.65■■□□□ 1.22
SMPD1-208ENST00000533123 SRCAPQ6ZRS2 3230 aa22.65■■□□□ 1.22
SMPD1-208ENST00000533123 LRP5O75197 1615 aa22.64■■□□□ 1.22
SMPD1-208ENST00000533123 TSHZ3Q63HK5 1081 aa22.64■■□□□ 1.21
SMPD1-208ENST00000533123 HOXA10P31260 410 aaPredicted RBP22.63■■□□□ 1.21
SMPD1-208ENST00000533123 TNNI3KQ59H18 835 aa22.63■■□□□ 1.21
SMPD1-208ENST00000533123 CCDC8Q9H0W5 538 aaPredicted RBP22.63■■□□□ 1.21
SMPD1-208ENST00000533123 FPGT-TNNI3KV9GXZ4 949 aa22.63■■□□□ 1.21
SMPD1-208ENST00000533123 SALL3Q9BXA9 1300 aa22.63■■□□□ 1.21
SMPD1-208ENST00000533123 MFAP1P55081 439 aaKnown RBP22.63■■□□□ 1.21
SMPD1-208ENST00000533123 MROH5Q6ZUA9 1318 aa22.62■■□□□ 1.21
SMPD1-208ENST00000533123 PDE1AP54750 535 aa22.62■■□□□ 1.21
SMPD1-208ENST00000533123 TIMM10P62072 90 aa22.62■■□□□ 1.21
SMPD1-208ENST00000533123 C2CD5Q86YS7 1000 aa22.62■■□□□ 1.21
SMPD1-208ENST00000533123 TAF5LO75529 589 aa22.62■■□□□ 1.21
SMPD1-208ENST00000533123 IFIT2P09913 472 aaKnown RBP22.62■■□□□ 1.21
SMPD1-208ENST00000533123 VGLL2Q8N8G2 317 aa22.62■■□□□ 1.21
SMPD1-208ENST00000533123 TLR7Q9NYK1 1049 aaKnown RBP22.62■■□□□ 1.21
SMPD1-208ENST00000533123 H0YIN7 160 aa22.61■■□□□ 1.21
SMPD1-208ENST00000533123 PDE8BO95263 885 aa22.61■■□□□ 1.21
SMPD1-208ENST00000533123 NPR1P16066 1061 aa22.61■■□□□ 1.21
SMPD1-208ENST00000533123 CHRNA5P30532 468 aa22.61■■□□□ 1.21
SMPD1-208ENST00000533123 CHRNDQ07001 517 aa22.61■■□□□ 1.21
SMPD1-208ENST00000533123 SLC51AQ86UW1 340 aa22.61■■□□□ 1.21
SMPD1-208ENST00000533123 CRAMP1Q96RY5 1269 aa22.61■■□□□ 1.21
SMPD1-208ENST00000533123 MINPP1Q9UNW1 487 aa22.61■■□□□ 1.21
SMPD1-208ENST00000533123 MX1P20591 662 aa22.61■■□□□ 1.21
SMPD1-208ENST00000533123 SGIP1Q9BQI5 828 aa22.61■■□□□ 1.21
SMPD1-208ENST00000533123 UPF2Q9HAU5 1272 aaKnown RBP22.61■■□□□ 1.21
SMPD1-208ENST00000533123 TBC1D9Q6ZT07 1266 aa22.6■■□□□ 1.21
SMPD1-208ENST00000533123 C10orf71Q711Q0 1435 aa22.6■■□□□ 1.21
SMPD1-208ENST00000533123 ZNF622Q969S3 477 aaKnown RBP eCLIP22.6■■□□□ 1.21
SMPD1-208ENST00000533123 MASTLQ96GX5 879 aa22.6■■□□□ 1.21
SMPD1-208ENST00000533123 NEUROD6Q96NK8 337 aa22.6■■□□□ 1.21
SMPD1-208ENST00000533123 COL11A2P13942 1736 aaPredicted RBP22.6■■□□□ 1.21
SMPD1-208ENST00000533123 A0A1B0GUL7 405 aa22.59■■□□□ 1.21
SMPD1-208ENST00000533123 SNAP23O00161 211 aa22.59■■□□□ 1.21
SMPD1-208ENST00000533123 OSBPL3Q9H4L5 887 aa22.59■■□□□ 1.21
SMPD1-208ENST00000533123 GPR108Q9NPR9 543 aa22.59■■□□□ 1.21
SMPD1-208ENST00000533123 PTGER2P43116 358 aa22.59■■□□□ 1.21
SMPD1-208ENST00000533123 TBC1D32Q96NH3 1257 aa22.59■■□□□ 1.21
SMPD1-208ENST00000533123 DBNLQ9UJU6 430 aaKnown RBP22.59■■□□□ 1.21
SMPD1-208ENST00000533123 AKAP2Q9Y2D5 859 aa22.59■■□□□ 1.21
SMPD1-208ENST00000533123 SDSP20132 328 aa22.58■■□□□ 1.21
SMPD1-208ENST00000533123 BBOX1O75936 387 aa22.58■■□□□ 1.2
SMPD1-208ENST00000533123 DBNDD2Q9BQY9 259 aa22.58■■□□□ 1.2
SMPD1-208ENST00000533123 CDC45O75419 566 aa22.57■■□□□ 1.2
SMPD1-208ENST00000533123 ATP2B3Q16720 1220 aa22.57■■□□□ 1.2
SMPD1-208ENST00000533123 ALDH1B1P30837 517 aa22.57■■□□□ 1.2
SMPD1-208ENST00000533123 ZNF609O15014 1411 aa22.56■■□□□ 1.2
SMPD1-208ENST00000533123 WTIPA6NIX2 430 aaPredicted RBP22.56■■□□□ 1.2
SMPD1-208ENST00000533123 PPP1R1BQ9UD71 204 aaPredicted RBP22.56■■□□□ 1.2
SMPD1-208ENST00000533123 STAP2Q9UGK3 403 aa22.56■■□□□ 1.2
SMPD1-208ENST00000533123 PUM3Q15397 648 aaKnown RBP22.55■■□□□ 1.2
SMPD1-208ENST00000533123 ADORA1P30542 326 aa22.55■■□□□ 1.2
SMPD1-208ENST00000533123 STYK1Q6J9G0 422 aa22.55■■□□□ 1.2
SMPD1-208ENST00000533123 DDRGK1Q96HY6 314 aa22.55■■□□□ 1.2
SMPD1-208ENST00000533123 A0A0G2JLW4 131 aa22.54■■□□□ 1.2
SMPD1-208ENST00000533123 PPEF1O14829 653 aaPredicted RBP22.54■■□□□ 1.2
SMPD1-208ENST00000533123 ECHDC1Q9NTX5 307 aa22.54■■□□□ 1.2
SMPD1-208ENST00000533123 FGFR2P21802 821 aa22.54■■□□□ 1.2
SMPD1-208ENST00000533123 KLHL34Q8N239 644 aa22.54■■□□□ 1.2
SMPD1-208ENST00000533123 XAGE2Q96GT9 111 aa22.54■■□□□ 1.2
SMPD1-208ENST00000533123 C22orf23Q9BZE7 217 aa22.54■■□□□ 1.2
SMPD1-208ENST00000533123 LPIN2Q92539 896 aa22.53■■□□□ 1.2
SMPD1-208ENST00000533123 ANKRD2Q9GZV1 360 aa22.53■■□□□ 1.2
SMPD1-208ENST00000533123 SPON1Q9HCB6 807 aa22.53■■□□□ 1.2
SMPD1-208ENST00000533123 ANKIB1Q9P2G1 1089 aa22.53■■□□□ 1.2
SMPD1-208ENST00000533123 DPEP1P16444 411 aa22.53■■□□□ 1.2
SMPD1-208ENST00000533123 PI4K2BQ8TCG2 481 aa22.53■■□□□ 1.2
SMPD1-208ENST00000533123 GPATCH3Q96I76 525 aa22.53■■□□□ 1.2
SMPD1-208ENST00000533123 TTC41PQ6P2S7 1318 aa22.52■■□□□ 1.2
SMPD1-208ENST00000533123 KIF13BQ9NQT8 1826 aa22.52■■□□□ 1.2
SMPD1-208ENST00000533123 A0A1B0GUL6 1792 aa22.52■■□□□ 1.19
SMPD1-208ENST00000533123 CACNA1SQ13698 1873 aa22.51■■□□□ 1.19
SMPD1-208ENST00000533123 PRPF40BQ6NWY9 871 aaKnown RBP22.51■■□□□ 1.19
SMPD1-208ENST00000533123 OLFM4Q6UX06 510 aa22.51■■□□□ 1.19
SMPD1-208ENST00000533123 NSFL1CQ9UNZ2 370 aaKnown RBP22.51■■□□□ 1.19
SMPD1-208ENST00000533123 KCNA3P22001 575 aa22.51■■□□□ 1.19
SMPD1-208ENST00000533123 GORABQ5T7V8 394 aa22.51■■□□□ 1.19
SMPD1-208ENST00000533123 CNKSR1Q969H4 720 aa22.51■■□□□ 1.19
SMPD1-208ENST00000533123 ATP6V0A2Q9Y487 856 aa22.51■■□□□ 1.19
SMPD1-208ENST00000533123 SLC5A1P13866 664 aa22.5■■□□□ 1.19
SMPD1-208ENST00000533123 DEKP35659 375 aaKnown RBP22.5■■□□□ 1.19
SMPD1-208ENST00000533123 SLC4A3P48751 1232 aa22.5■■□□□ 1.19
SMPD1-208ENST00000533123 GPSM2P81274 684 aa22.5■■□□□ 1.19
SMPD1-208ENST00000533123 TMC4Q7Z404 712 aa22.5■■□□□ 1.19
SMPD1-208ENST00000533123 SP8Q8IXZ3 490 aa22.5■■□□□ 1.19
SMPD1-208ENST00000533123 KCNJ4P48050 445 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms