RNA–Protein interactions for RNA: ENST00000533110.5

CTSB-227, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-227ENST00000533110 ZC3H12CQ9C0D7 883 aaKnown RBP12.18□□□□□ -0.46
CTSB-227ENST00000533110 KCNQ5Q9NR82 932 aa12.18□□□□□ -0.46
CTSB-227ENST00000533110 PER1O15534 1290 aaPredicted RBP12.17□□□□□ -0.46
CTSB-227ENST00000533110 VIL1P09327 827 aaKnown RBP12.17□□□□□ -0.46
CTSB-227ENST00000533110 GPSM2P81274 684 aa12.17□□□□□ -0.46
CTSB-227ENST00000533110 NLRP10Q86W26 655 aa12.17□□□□□ -0.46
CTSB-227ENST00000533110 THUMPD2Q9BTF0 503 aaKnown RBP12.17□□□□□ -0.46
CTSB-227ENST00000533110 POLLQ9UGP5 575 aa12.17□□□□□ -0.46
CTSB-227ENST00000533110 COLQQ9Y215 455 aaPredicted RBP12.17□□□□□ -0.46
CTSB-227ENST00000533110 ANKRD36CQ5JPF3 1778 aa12.17□□□□□ -0.46
CTSB-227ENST00000533110 DLL1O00548 723 aa12.16□□□□□ -0.46
CTSB-227ENST00000533110 ZNF280AP59817 542 aaPredicted RBP12.16□□□□□ -0.46
CTSB-227ENST00000533110 RSBN1LQ6PCB5 846 aaPredicted RBP12.16□□□□□ -0.46
CTSB-227ENST00000533110 AGBL3Q8NEM8 1001 aa12.16□□□□□ -0.46
CTSB-227ENST00000533110 MYOZ2Q9NPC6 264 aa12.16□□□□□ -0.46
CTSB-227ENST00000533110 LAMB2P55268 1798 aa12.15□□□□□ -0.46
CTSB-227ENST00000533110 KDM3BQ7LBC6 1761 aa12.15□□□□□ -0.46
CTSB-227ENST00000533110 ZNF609O15014 1411 aa12.15□□□□□ -0.46
CTSB-227ENST00000533110 USP17L8P0C7I0 530 aa12.15□□□□□ -0.46
CTSB-227ENST00000533110 EIF2S2P20042 333 aaKnown RBP12.15□□□□□ -0.46
CTSB-227ENST00000533110 OTOP1Q7RTM1 612 aa12.15□□□□□ -0.46
CTSB-227ENST00000533110 TBC1D16Q8TBP0 767 aa12.15□□□□□ -0.46
CTSB-227ENST00000533110 NECTIN2Q92692 538 aa12.15□□□□□ -0.46
CTSB-227ENST00000533110 CELF1Q92879 486 aaKnown RBP12.15□□□□□ -0.46
CTSB-227ENST00000533110 TMEM106CQ9BVX2 250 aa12.15□□□□□ -0.46
CTSB-227ENST00000533110 CLSPNQ9HAW4 1339 aa12.14□□□□□ -0.47
CTSB-227ENST00000533110 POLR2AP24928 1970 aaKnown RBP12.14□□□□□ -0.47
CTSB-227ENST00000533110 MKI67P46013 3256 aaKnown RBP12.14□□□□□ -0.47
CTSB-227ENST00000533110 EN2P19622 333 aaPredicted RBP12.14□□□□□ -0.47
CTSB-227ENST00000533110 AIMP1Q12904 312 aaKnown RBP12.14□□□□□ -0.47
CTSB-227ENST00000533110 PRAMEF18Q5VWM3 479 aa12.14□□□□□ -0.47
CTSB-227ENST00000533110 ARMC9Q7Z3E5 817 aa12.14□□□□□ -0.47
CTSB-227ENST00000533110 ERO1AQ96HE7 468 aa12.14□□□□□ -0.47
CTSB-227ENST00000533110 R3HDMLQ9H3Y0 253 aa12.14□□□□□ -0.47
CTSB-227ENST00000533110 SCAF8Q9UPN6 1271 aaKnown RBP12.14□□□□□ -0.47
CTSB-227ENST00000533110 UFL1O94874 794 aa12.13□□□□□ -0.47
CTSB-227ENST00000533110 SLC17A8Q8NDX2 589 aa12.13□□□□□ -0.47
CTSB-227ENST00000533110 ANKIB1Q9P2G1 1089 aa12.13□□□□□ -0.47
CTSB-227ENST00000533110 PTPN22Q9Y2R2 807 aa12.13□□□□□ -0.47
CTSB-227ENST00000533110 ANXA1P04083 346 aa12.12□□□□□ -0.47
CTSB-227ENST00000533110 INHBEP58166 350 aa12.12□□□□□ -0.47
CTSB-227ENST00000533110 SF3B3Q15393 1217 aaKnown RBP12.12□□□□□ -0.47
CTSB-227ENST00000533110 COPS6Q7L5N1 327 aa12.12□□□□□ -0.47
CTSB-227ENST00000533110 LRP10Q7Z4F1 713 aa12.12□□□□□ -0.47
CTSB-227ENST00000533110 ZNF428Q96B54 188 aa12.12□□□□□ -0.47
CTSB-227ENST00000533110 ARMC5Q96C12 935 aa12.12□□□□□ -0.47
CTSB-227ENST00000533110 GGA1Q9UJY5 639 aa12.12□□□□□ -0.47
CTSB-227ENST00000533110 RBBP6Q7Z6E9 1792 aaKnown RBP12.11□□□□□ -0.47
CTSB-227ENST00000533110 MANSC4A6NHS7 340 aaPredicted RBP12.11□□□□□ -0.47
CTSB-227ENST00000533110 PTPN12Q05209 780 aaKnown RBP12.11□□□□□ -0.47
CTSB-227ENST00000533110 PRKG1Q13976 671 aa12.11□□□□□ -0.47
CTSB-227ENST00000533110 PDIA6Q15084 440 aa12.11□□□□□ -0.47
CTSB-227ENST00000533110 PROSER3Q2NL68 480 aa12.11□□□□□ -0.47
CTSB-227ENST00000533110 SPRYD7Q5W111 196 aa12.11□□□□□ -0.47
CTSB-227ENST00000533110 OGFOD1Q8N543 542 aa12.11□□□□□ -0.47
CTSB-227ENST00000533110 XAGE3Q8WTP9 111 aa12.11□□□□□ -0.47
CTSB-227ENST00000533110 EFCC1Q9HA90 598 aa12.11□□□□□ -0.47
CTSB-227ENST00000533110 TSPYL4Q9UJ04 414 aa12.11□□□□□ -0.47
CTSB-227ENST00000533110 USP17L3A6NCW0 530 aa12.1□□□□□ -0.47
CTSB-227ENST00000533110 USP17L4A6NCW7 530 aa12.1□□□□□ -0.47
CTSB-227ENST00000533110 RPS8P62241 208 aaKnown RBP12.1□□□□□ -0.47
CTSB-227ENST00000533110 SLC4A8Q2Y0W8 1093 aa12.1□□□□□ -0.47
CTSB-227ENST00000533110 NBPF9Q3BBW0 867 aa12.1□□□□□ -0.47
CTSB-227ENST00000533110 USP17L1Q7RTZ2 530 aa12.1□□□□□ -0.47
CTSB-227ENST00000533110 IFNL1Q8IU54 200 aa12.1□□□□□ -0.47
CTSB-227ENST00000533110 CD99L2Q8TCZ2 262 aa12.1□□□□□ -0.47
CTSB-227ENST00000533110 PODXL2Q9NZ53 605 aa12.1□□□□□ -0.47
CTSB-227ENST00000533110 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.1□□□□□ -0.47
CTSB-227ENST00000533110 HTTP42858 3142 aa12.09□□□□□ -0.47
CTSB-227ENST00000533110 SCN9AQ15858 1988 aa12.09□□□□□ -0.47
CTSB-227ENST00000533110 TAF1P21675 1872 aa12.09□□□□□ -0.47
CTSB-227ENST00000533110 H0YGN5 161 aa12.09□□□□□ -0.47
CTSB-227ENST00000533110 OTUD7BQ6GQQ9 843 aa12.09□□□□□ -0.47
CTSB-227ENST00000533110 CHRDL2Q6WN34 429 aa12.09□□□□□ -0.47
CTSB-227ENST00000533110 NBPF11Q86T75 865 aa12.09□□□□□ -0.47
CTSB-227ENST00000533110 FAM89AQ96GI7 184 aa12.09□□□□□ -0.47
CTSB-227ENST00000533110 GMLQ99445 158 aa12.09□□□□□ -0.47
CTSB-227ENST00000533110 ANGEL1Q9UNK9 670 aaKnown RBP12.09□□□□□ -0.47
CTSB-227ENST00000533110 ARHGEF6Q15052 776 aa12.08□□□□□ -0.48
CTSB-227ENST00000533110 SLC9C1Q4G0N8 1177 aa12.08□□□□□ -0.48
CTSB-227ENST00000533110 PODNQ7Z5L7 613 aa12.08□□□□□ -0.48
CTSB-227ENST00000533110 APOBEC3FQ8IUX4 373 aaKnown RBP12.08□□□□□ -0.48
CTSB-227ENST00000533110 SLC10A4Q96EP9 437 aa12.08□□□□□ -0.48
CTSB-227ENST00000533110 WNT10BO00744 389 aa12.07□□□□□ -0.48
CTSB-227ENST00000533110 IRS4O14654 1257 aaPredicted RBP12.07□□□□□ -0.48
CTSB-227ENST00000533110 ZBTB48P10074 688 aaPredicted RBP12.07□□□□□ -0.48
CTSB-227ENST00000533110 HSP90B1P14625 803 aaKnown RBP12.07□□□□□ -0.48
CTSB-227ENST00000533110 SP3Q02447 781 aa12.07□□□□□ -0.48
CTSB-227ENST00000533110 RTL5Q5HYW3 569 aaPredicted RBP12.07□□□□□ -0.48
CTSB-227ENST00000533110 LDLRAD1Q5T700 205 aa12.07□□□□□ -0.48
CTSB-227ENST00000533110 FBXW7Q969H0 707 aa12.07□□□□□ -0.48
CTSB-227ENST00000533110 OTUD5Q96G74 571 aa12.07□□□□□ -0.48
CTSB-227ENST00000533110 ZNF333Q96JL9 665 aa12.07□□□□□ -0.48
CTSB-227ENST00000533110 TRIOBPQ9H2D6 2365 aa12.07□□□□□ -0.48
CTSB-227ENST00000533110 KIAA0100Q14667 2235 aaKnown RBP12.07□□□□□ -0.48
CTSB-227ENST00000533110 MYO3BQ8WXR4 1341 aa12.07□□□□□ -0.48
CTSB-227ENST00000533110 MAPK8IP3Q9UPT6 1336 aa12.07□□□□□ -0.48
CTSB-227ENST00000533110 IGF2BP3O00425 579 aaKnown RBP eCLIP12.06□□□□□ -0.481e-7■□□□□ 9.2
CTSB-227ENST00000533110 SASH1O94885 1247 aa12.06□□□□□ -0.48
CTSB-227ENST00000533110 CRHR2Q13324 411 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms