RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 CIAPIN1Q6FI81 312 aa16.35■□□□□ 0.21
TRAPPC4-212ENST00000533058 ANKIB1Q9P2G1 1089 aa16.35■□□□□ 0.21
TRAPPC4-212ENST00000533058 NOB1Q9ULX3 412 aaKnown RBP16.35■□□□□ 0.21
TRAPPC4-212ENST00000533058 GJA3Q9Y6H8 435 aa16.35■□□□□ 0.21
TRAPPC4-212ENST00000533058 XDHP47989 1333 aa16.35■□□□□ 0.21
TRAPPC4-212ENST00000533058 LTBP1Q14766 1721 aa16.34■□□□□ 0.21
TRAPPC4-212ENST00000533058 ITGA6P23229 1130 aa16.34■□□□□ 0.21
TRAPPC4-212ENST00000533058 ATP2B4P23634 1241 aa16.34■□□□□ 0.21
TRAPPC4-212ENST00000533058 LMOD1P29536 600 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC4-212ENST00000533058 FOXO4P98177 505 aa16.34■□□□□ 0.21
TRAPPC4-212ENST00000533058 SLC4A10Q6U841 1118 aa16.34■□□□□ 0.21
TRAPPC4-212ENST00000533058 ZC3H12CQ9C0D7 883 aaKnown RBP16.34■□□□□ 0.21
TRAPPC4-212ENST00000533058 GGA1Q9UJY5 639 aa16.34■□□□□ 0.21
TRAPPC4-212ENST00000533058 RCAN3Q9UKA8 241 aa16.34■□□□□ 0.21
TRAPPC4-212ENST00000533058 MINPP1Q9UNW1 487 aa16.34■□□□□ 0.21
TRAPPC4-212ENST00000533058 KIF16BQ96L93 1317 aa16.34■□□□□ 0.21
TRAPPC4-212ENST00000533058 YDJCA8MPS7 323 aa16.33■□□□□ 0.2
TRAPPC4-212ENST00000533058 IPO8O15397 1037 aaKnown RBP16.33■□□□□ 0.2
TRAPPC4-212ENST00000533058 POTEIP0CG38 1075 aa16.33■□□□□ 0.2
TRAPPC4-212ENST00000533058 POTEJP0CG39 1038 aa16.33■□□□□ 0.2
TRAPPC4-212ENST00000533058 IGHMBP2P38935 993 aaKnown RBP16.33■□□□□ 0.2
TRAPPC4-212ENST00000533058 C9orf78Q9NZ63 289 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC4-212ENST00000533058 UTYO14607 1347 aa16.33■□□□□ 0.2
TRAPPC4-212ENST00000533058 UFL1O94874 794 aa16.32■□□□□ 0.2
TRAPPC4-212ENST00000533058 USP50Q70EL3 339 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC4-212ENST00000533058 GPRC5DQ9NZD1 345 aa16.32■□□□□ 0.2
TRAPPC4-212ENST00000533058 ANKRD18BA2A2Z9 1011 aa16.31■□□□□ 0.2
TRAPPC4-212ENST00000533058 EPS15P42566 896 aa16.31■□□□□ 0.2
TRAPPC4-212ENST00000533058 FAM161AQ3B820 660 aa16.31■□□□□ 0.2
TRAPPC4-212ENST00000533058 DNAJC5GQ8N7S2 189 aa16.31■□□□□ 0.2
TRAPPC4-212ENST00000533058 DPF2Q92785 391 aa16.31■□□□□ 0.2
TRAPPC4-212ENST00000533058 API5Q9BZZ5 524 aaKnown RBP16.31■□□□□ 0.2
TRAPPC4-212ENST00000533058 LEMD3Q9Y2U8 911 aa16.31■□□□□ 0.2
TRAPPC4-212ENST00000533058 MYH3P11055 1940 aa16.31■□□□□ 0.2
TRAPPC4-212ENST00000533058 CEP350Q5VT06 3117 aa16.3■□□□□ 0.2
TRAPPC4-212ENST00000533058 RIMBP2O15034 1052 aa16.3■□□□□ 0.2
TRAPPC4-212ENST00000533058 RAD17O75943 681 aa16.3■□□□□ 0.2
TRAPPC4-212ENST00000533058 IFIT5Q13325 482 aaKnown RBP16.3■□□□□ 0.2
TRAPPC4-212ENST00000533058 EAPPQ56P03 285 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC4-212ENST00000533058 MPHOSPH8Q99549 860 aa16.3■□□□□ 0.2
TRAPPC4-212ENST00000533058 ANKRD2Q9GZV1 360 aa16.3■□□□□ 0.2
TRAPPC4-212ENST00000533058 ADARB2Q9NS39 739 aaKnown RBP16.3■□□□□ 0.2
TRAPPC4-212ENST00000533058 PASKQ96RG2 1323 aa16.29■□□□□ 0.2
TRAPPC4-212ENST00000533058 ECE2O60344 883 aa16.29■□□□□ 0.2
TRAPPC4-212ENST00000533058 ITGBL1O95965 494 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC4-212ENST00000533058 RPS12P25398 132 aaKnown RBP16.29■□□□□ 0.2
TRAPPC4-212ENST00000533058 GMPSP49915 693 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC4-212ENST00000533058 CCT4P50991 539 aaKnown RBP16.29■□□□□ 0.2
TRAPPC4-212ENST00000533058 EPHA10Q5JZY3 1008 aa16.29■□□□□ 0.2
TRAPPC4-212ENST00000533058 LMBR1LQ6UX01 489 aa16.29■□□□□ 0.2
TRAPPC4-212ENST00000533058 PODNQ7Z5L7 613 aa16.29■□□□□ 0.2
TRAPPC4-212ENST00000533058 DBNDD1Q9H9R9 158 aa16.29■□□□□ 0.2
TRAPPC4-212ENST00000533058 ADAMTSL1Q8N6G6 1762 aa16.28■□□□□ 0.2
TRAPPC4-212ENST00000533058 MED23Q9ULK4 1368 aa16.28■□□□□ 0.2
TRAPPC4-212ENST00000533058 PSMD14O00487 310 aa16.28■□□□□ 0.2
TRAPPC4-212ENST00000533058 VIL1P09327 827 aaKnown RBP16.28■□□□□ 0.2
TRAPPC4-212ENST00000533058 NBPF7P0C2Y1 421 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC4-212ENST00000533058 DOK7Q18PE1 504 aa16.28■□□□□ 0.2
TRAPPC4-212ENST00000533058 RABL6Q3YEC7 729 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC4-212ENST00000533058 ZKSCAN2Q63HK3 967 aa16.28■□□□□ 0.2
TRAPPC4-212ENST00000533058 KAZALD1Q96I82 304 aa16.28■□□□□ 0.2
TRAPPC4-212ENST00000533058 CCDC57Q2TAC2 916 aa16.27■□□□□ 0.2
TRAPPC4-212ENST00000533058 ATF7IPQ6VMQ6 1270 aa16.27■□□□□ 0.2
TRAPPC4-212ENST00000533058 ARHGAP45Q92619 1136 aa16.27■□□□□ 0.2
TRAPPC4-212ENST00000533058 CLUAP1Q96AJ1 413 aa16.27■□□□□ 0.2
TRAPPC4-212ENST00000533058 GPR101Q96P66 508 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC4-212ENST00000533058 USP44Q9H0E7 712 aa16.27■□□□□ 0.2
TRAPPC4-212ENST00000533058 PGAP2Q9UHJ9 254 aa16.27■□□□□ 0.2
TRAPPC4-212ENST00000533058 CLEC11AQ9Y240 323 aa16.27■□□□□ 0.2
TRAPPC4-212ENST00000533058 G3V3G9 751 aa16.26■□□□□ 0.19
TRAPPC4-212ENST00000533058 CHRNDQ07001 517 aa16.26■□□□□ 0.19
TRAPPC4-212ENST00000533058 DCAF8Q5TAQ9 597 aa16.26■□□□□ 0.19
TRAPPC4-212ENST00000533058 C15orf52Q6ZUT6 534 aaKnown RBP16.26■□□□□ 0.19
TRAPPC4-212ENST00000533058 FTSJ3Q8IY81 847 aaKnown RBP16.26■□□□□ 0.19
TRAPPC4-212ENST00000533058 CNTROBQ8N137 903 aa16.26■□□□□ 0.19
TRAPPC4-212ENST00000533058 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC4-212ENST00000533058 ZC3H15Q8WU90 426 aaKnown RBP16.26■□□□□ 0.19
TRAPPC4-212ENST00000533058 SUCLG2Q96I99 432 aa16.26■□□□□ 0.19
TRAPPC4-212ENST00000533058 CREBZFQ9NS37 354 aa16.26■□□□□ 0.19
TRAPPC4-212ENST00000533058 CNOT7Q9UIV1 285 aaKnown RBP16.26■□□□□ 0.19
TRAPPC4-212ENST00000533058 ZNF609O15014 1411 aa16.26■□□□□ 0.19
TRAPPC4-212ENST00000533058 ZNF804BA4D1E1 1349 aa16.25■□□□□ 0.19
TRAPPC4-212ENST00000533058 H7C1D1 291 aa16.25■□□□□ 0.19
TRAPPC4-212ENST00000533058 KLRG1Q96E93 195 aa16.25■□□□□ 0.19
TRAPPC4-212ENST00000533058 COA1Q9GZY4 146 aa16.25■□□□□ 0.19
TRAPPC4-212ENST00000533058 KCNQ5Q9NR82 932 aa16.25■□□□□ 0.19
TRAPPC4-212ENST00000533058 WTIPA6NIX2 430 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC4-212ENST00000533058 TRIM27P14373 513 aa16.24■□□□□ 0.19
TRAPPC4-212ENST00000533058 MAP1SQ66K74 1059 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC4-212ENST00000533058 LDHAL6AQ6ZMR3 332 aa16.24■□□□□ 0.19
TRAPPC4-212ENST00000533058 AGBL3Q8NEM8 1001 aa16.24■□□□□ 0.19
TRAPPC4-212ENST00000533058 ZBTB12Q9Y330 459 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC4-212ENST00000533058 CHMP3Q9Y3E7 222 aa16.24■□□□□ 0.19
TRAPPC4-212ENST00000533058 PLIN1O60240 522 aa16.23■□□□□ 0.19
TRAPPC4-212ENST00000533058 HTRA3P83110 453 aa16.23■□□□□ 0.19
TRAPPC4-212ENST00000533058 MICALL2Q8IY33 904 aa16.23■□□□□ 0.19
TRAPPC4-212ENST00000533058 JMYQ8N9B5 988 aa16.23■□□□□ 0.19
TRAPPC4-212ENST00000533058 BICC1Q9H694 974 aaKnown RBP16.23■□□□□ 0.19
TRAPPC4-212ENST00000533058 TNNQ9UQP3 1299 aa16.23■□□□□ 0.19
TRAPPC4-212ENST00000533058 USP17L3A6NCW0 530 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms