RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 EXOC6Q8TAG9 804 aa13.97□□□□□ -0.17
TRAPPC4-211ENST00000533012 SSH3Q8TE77 659 aa13.97□□□□□ -0.17
TRAPPC4-211ENST00000533012 PSMD1Q99460 953 aa13.97□□□□□ -0.17
TRAPPC4-211ENST00000533012 TAOK3Q9H2K8 898 aa13.97□□□□□ -0.17
TRAPPC4-211ENST00000533012 RIPOR2Q9Y4F9 1068 aa13.97□□□□□ -0.17
TRAPPC4-211ENST00000533012 ATP2B4P23634 1241 aa13.96□□□□□ -0.17
TRAPPC4-211ENST00000533012 IRX6P78412 446 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC4-211ENST00000533012 POLA2Q14181 598 aa13.96□□□□□ -0.17
TRAPPC4-211ENST00000533012 LRRC24Q50LG9 513 aa13.96□□□□□ -0.17
TRAPPC4-211ENST00000533012 PUS3Q9BZE2 481 aaKnown RBP13.96□□□□□ -0.17
TRAPPC4-211ENST00000533012 SIL1Q9H173 461 aa13.96□□□□□ -0.17
TRAPPC4-211ENST00000533012 PODXL2Q9NZ53 605 aa13.96□□□□□ -0.17
TRAPPC4-211ENST00000533012 GGA1Q9UJY5 639 aa13.96□□□□□ -0.17
TRAPPC4-211ENST00000533012 PA2G4Q9UQ80 394 aaKnown RBP13.96□□□□□ -0.17
TRAPPC4-211ENST00000533012 SLX4Q8IY92 1834 aa13.96□□□□□ -0.17
TRAPPC4-211ENST00000533012 DLEC1Q9Y238 1755 aa13.96□□□□□ -0.18
TRAPPC4-211ENST00000533012 XDHP47989 1333 aa13.95□□□□□ -0.18
TRAPPC4-211ENST00000533012 MROH5Q6ZUA9 1318 aa13.95□□□□□ -0.18
TRAPPC4-211ENST00000533012 C6orf229H3BNL8 230 aa13.95□□□□□ -0.18
TRAPPC4-211ENST00000533012 NFKBIEO00221 500 aa13.95□□□□□ -0.18
TRAPPC4-211ENST00000533012 CIAO1O76071 339 aa13.95□□□□□ -0.18
TRAPPC4-211ENST00000533012 IL15P40933 162 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC4-211ENST00000533012 G3BP1Q13283 466 aaKnown RBP eCLIP13.95□□□□□ -0.18
TRAPPC4-211ENST00000533012 METTL24Q5JXM2 366 aa13.95□□□□□ -0.18
TRAPPC4-211ENST00000533012 SLC51AQ86UW1 340 aa13.95□□□□□ -0.18
TRAPPC4-211ENST00000533012 RTFDC1Q9BY42 306 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC4-211ENST00000533012 LEMD3Q9Y2U8 911 aa13.95□□□□□ -0.18
TRAPPC4-211ENST00000533012 LTBP3Q9NS15 1303 aa13.94□□□□□ -0.18
TRAPPC4-211ENST00000533012 TAF5LO75529 589 aa13.94□□□□□ -0.18
TRAPPC4-211ENST00000533012 SURF6O75683 361 aaKnown RBP13.94□□□□□ -0.18
TRAPPC4-211ENST00000533012 UFL1O94874 794 aa13.94□□□□□ -0.18
TRAPPC4-211ENST00000533012 LMNB1P20700 586 aa13.94□□□□□ -0.18
TRAPPC4-211ENST00000533012 KCNJ4P48050 445 aa13.94□□□□□ -0.18
TRAPPC4-211ENST00000533012 SIRT2Q8IXJ6 389 aa13.94□□□□□ -0.18
TRAPPC4-211ENST00000533012 HELBQ8NG08 1087 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC4-211ENST00000533012 TBC1D16Q8TBP0 767 aa13.94□□□□□ -0.18
TRAPPC4-211ENST00000533012 EYA3Q99504 573 aa13.94□□□□□ -0.18
TRAPPC4-211ENST00000533012 VPS33BQ9H267 617 aa13.94□□□□□ -0.18
TRAPPC4-211ENST00000533012 CEP126Q9P2H0 1117 aa13.94□□□□□ -0.18
TRAPPC4-211ENST00000533012 POLLQ9UGP5 575 aa13.94□□□□□ -0.18
TRAPPC4-211ENST00000533012 GTF3C3Q9Y5Q9 886 aa13.94□□□□□ -0.18
TRAPPC4-211ENST00000533012 RASSF7Q02833 373 aa13.93□□□□□ -0.18
TRAPPC4-211ENST00000533012 OS9Q13438 667 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC4-211ENST00000533012 WASHC4Q2M389 1173 aa13.93□□□□□ -0.18
TRAPPC4-211ENST00000533012 ATG9AQ7Z3C6 839 aa13.93□□□□□ -0.18
TRAPPC4-211ENST00000533012 ZC3H12CQ9C0D7 883 aaKnown RBP13.93□□□□□ -0.18
TRAPPC4-211ENST00000533012 ZNF277Q9NRM2 450 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC4-211ENST00000533012 NOP58Q9Y2X3 529 aaKnown RBP13.93□□□□□ -0.18
TRAPPC4-211ENST00000533012 PCDHB15Q9Y5E8 787 aa13.93□□□□□ -0.18
TRAPPC4-211ENST00000533012 MYH3P11055 1940 aa13.93□□□□□ -0.18
TRAPPC4-211ENST00000533012 BRCA1P38398 1863 aaKnown RBP13.93□□□□□ -0.18
TRAPPC4-211ENST00000533012 ZNF804BA4D1E1 1349 aa13.92□□□□□ -0.18
TRAPPC4-211ENST00000533012 PDE8BO95263 885 aa13.92□□□□□ -0.18
TRAPPC4-211ENST00000533012 IARSP41252 1262 aaKnown RBP13.92□□□□□ -0.18
TRAPPC4-211ENST00000533012 HSP90AB4PQ58FF6 505 aa13.92□□□□□ -0.18
TRAPPC4-211ENST00000533012 COL4A1P02462 1669 aa13.91□□□□□ -0.18
TRAPPC4-211ENST00000533012 G3V3G9 751 aa13.91□□□□□ -0.18
TRAPPC4-211ENST00000533012 RIMBP2O15034 1052 aa13.91□□□□□ -0.18
TRAPPC4-211ENST00000533012 PPIP5K2O43314 1243 aa13.91□□□□□ -0.18
TRAPPC4-211ENST00000533012 NEFLP07196 543 aa13.91□□□□□ -0.18
TRAPPC4-211ENST00000533012 UBE4AQ14139 1066 aa13.91□□□□□ -0.18
TRAPPC4-211ENST00000533012 DCAF8Q5TAQ9 597 aa13.91□□□□□ -0.18
TRAPPC4-211ENST00000533012 C9orf131Q5VYM1 1079 aa13.91□□□□□ -0.18
TRAPPC4-211ENST00000533012 LARGE2Q8N3Y3 721 aa13.91□□□□□ -0.18
TRAPPC4-211ENST00000533012 JDP2Q8WYK2 163 aa13.91□□□□□ -0.18
TRAPPC4-211ENST00000533012 RNF181Q9P0P0 153 aa13.91□□□□□ -0.18
TRAPPC4-211ENST00000533012 TAF1P21675 1872 aa13.91□□□□□ -0.18
TRAPPC4-211ENST00000533012 SNED1Q8TER0 1413 aa13.9□□□□□ -0.18
TRAPPC4-211ENST00000533012 WTIPA6NIX2 430 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC4-211ENST00000533012 PRELPP51888 382 aa13.9□□□□□ -0.18
TRAPPC4-211ENST00000533012 KIAA2012Q0VF49 1180 aa13.9□□□□□ -0.18
TRAPPC4-211ENST00000533012 AOC3Q16853 763 aa13.9□□□□□ -0.18
TRAPPC4-211ENST00000533012 ERC1Q8IUD2 1116 aa13.9□□□□□ -0.18
TRAPPC4-211ENST00000533012 AKAP2Q9Y2D5 859 aa13.9□□□□□ -0.18
TRAPPC4-211ENST00000533012 UTRNP46939 3433 aa13.89□□□□□ -0.19
TRAPPC4-211ENST00000533012 SNAP23O00161 211 aa13.89□□□□□ -0.19
TRAPPC4-211ENST00000533012 RAB11FIP3O75154 756 aa13.89□□□□□ -0.19
TRAPPC4-211ENST00000533012 TFCP2Q12800 502 aa13.89□□□□□ -0.19
TRAPPC4-211ENST00000533012 PUM3Q15397 648 aaKnown RBP13.89□□□□□ -0.19
TRAPPC4-211ENST00000533012 VGLL2Q8N8G2 317 aa13.89□□□□□ -0.19
TRAPPC4-211ENST00000533012 LPIN2Q92539 896 aa13.89□□□□□ -0.19
TRAPPC4-211ENST00000533012 GPR101Q96P66 508 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC4-211ENST00000533012 EXOC6BQ9Y2D4 811 aa13.89□□□□□ -0.19
TRAPPC4-211ENST00000533012 ARFGEF1Q9Y6D6 1849 aa13.89□□□□□ -0.19
TRAPPC4-211ENST00000533012 SASH1O94885 1247 aa13.88□□□□□ -0.19
TRAPPC4-211ENST00000533012 IFIT1P09914 478 aaKnown RBP13.88□□□□□ -0.19
TRAPPC4-211ENST00000533012 C15orf52Q6ZUT6 534 aaKnown RBP13.88□□□□□ -0.19
TRAPPC4-211ENST00000533012 NIM1KQ8IY84 436 aa13.88□□□□□ -0.19
TRAPPC4-211ENST00000533012 RWDD1Q9H446 243 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC4-211ENST00000533012 DCTPP1Q9H773 170 aa13.88□□□□□ -0.19
TRAPPC4-211ENST00000533012 CACNA1SQ13698 1873 aa13.87□□□□□ -0.19
TRAPPC4-211ENST00000533012 SLC5A1P13866 664 aa13.87□□□□□ -0.19
TRAPPC4-211ENST00000533012 HDAC1Q13547 482 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC4-211ENST00000533012 DOK7Q18PE1 504 aa13.87□□□□□ -0.19
TRAPPC4-211ENST00000533012 CAVIN4Q5BKX8 364 aa13.87□□□□□ -0.19
TRAPPC4-211ENST00000533012 MED23Q9ULK4 1368 aa13.86□□□□□ -0.19
TRAPPC4-211ENST00000533012 FGFR2P21802 821 aa13.86□□□□□ -0.19
TRAPPC4-211ENST00000533012 TIMM10P62072 90 aa13.86□□□□□ -0.19
TRAPPC4-211ENST00000533012 ATP2B3Q16720 1220 aa13.86□□□□□ -0.19
TRAPPC4-211ENST00000533012 TXNRD3Q86VQ6 643 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms