RNA–Protein interactions for RNA: ENST00000532833.1

TRIM29-219, Transcript of tripartite motif containing 29, humanhuman

TSL 4

Gene TRIM29, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-219ENST00000532833 SAGE1Q9NXZ1 904 aa22.44■■□□□ 1.18
TRIM29-219ENST00000532833 AKAP11Q9UKA4 1901 aa22.44■■□□□ 1.18
TRIM29-219ENST00000532833 TRPA1O75762 1119 aa22.43■■□□□ 1.18
TRIM29-219ENST00000532833 ANKRD13DQ6ZTN6 518 aa22.43■■□□□ 1.18
TRIM29-219ENST00000532833 TBC1D16Q8TBP0 767 aa22.43■■□□□ 1.18
TRIM29-219ENST00000532833 LMOD3Q0VAK6 560 aa22.42■■□□□ 1.18
TRIM29-219ENST00000532833 KIF4BQ2VIQ3 1234 aa22.42■■□□□ 1.18
TRIM29-219ENST00000532833 GGA3Q9NZ52 723 aa22.42■■□□□ 1.18
TRIM29-219ENST00000532833 SLC10A3P09131 477 aa22.41■■□□□ 1.18
TRIM29-219ENST00000532833 VIL1P09327 827 aaKnown RBP22.41■■□□□ 1.18
TRIM29-219ENST00000532833 SOX10P56693 466 aa22.41■■□□□ 1.18
TRIM29-219ENST00000532833 NEUROD2Q15784 382 aa22.41■■□□□ 1.18
TRIM29-219ENST00000532833 CSRNP1Q96S65 589 aa22.41■■□□□ 1.18
TRIM29-219ENST00000532833 EYA3Q99504 573 aa22.41■■□□□ 1.18
TRIM29-219ENST00000532833 RPS8P62241 208 aaKnown RBP22.4■■□□□ 1.18
TRIM29-219ENST00000532833 HDGFL1Q5TGJ6 251 aa22.4■■□□□ 1.18
TRIM29-219ENST00000532833 LAS1LQ9Y4W2 734 aaKnown RBP22.4■■□□□ 1.18
TRIM29-219ENST00000532833 IRS4O14654 1257 aaPredicted RBP22.39■■□□□ 1.17
TRIM29-219ENST00000532833 SULF1Q8IWU6 871 aa22.39■■□□□ 1.17
TRIM29-219ENST00000532833 CCDC146Q8IYE0 955 aa22.39■■□□□ 1.17
TRIM29-219ENST00000532833 CDCA5Q96FF9 252 aa22.39■■□□□ 1.17
TRIM29-219ENST00000532833 TRIM35Q9UPQ4 493 aa22.39■■□□□ 1.17
TRIM29-219ENST00000532833 ZC3H12CQ9C0D7 883 aaKnown RBP22.38■■□□□ 1.17
TRIM29-219ENST00000532833 SEC31BQ9NQW1 1179 aa22.38■■□□□ 1.17
TRIM29-219ENST00000532833 PODXL2Q9NZ53 605 aa22.37■■□□□ 1.17
TRIM29-219ENST00000532833 PCDH10Q9P2E7 1040 aa22.37■■□□□ 1.17
TRIM29-219ENST00000532833 DBF4Q9UBU7 674 aaPredicted RBP22.37■■□□□ 1.17
TRIM29-219ENST00000532833 TRIM28Q13263 835 aaKnown RBP22.36■■□□□ 1.17
TRIM29-219ENST00000532833 UFL1O94874 794 aa22.35■■□□□ 1.17
TRIM29-219ENST00000532833 HOXB7P09629 217 aa22.35■■□□□ 1.17
TRIM29-219ENST00000532833 ZNF280AP59817 542 aaPredicted RBP22.35■■□□□ 1.17
TRIM29-219ENST00000532833 SCARF1Q14162 830 aa22.35■■□□□ 1.17
TRIM29-219ENST00000532833 ANGEL2Q5VTE6 544 aaKnown RBP22.35■■□□□ 1.17
TRIM29-219ENST00000532833 RASAL3Q86YV0 1011 aa22.35■■□□□ 1.17
TRIM29-219ENST00000532833 PSME4Q14997 1843 aa22.34■■□□□ 1.17
TRIM29-219ENST00000532833 HYPKQ9NX55 129 aa22.34■■□□□ 1.17
TRIM29-219ENST00000532833 RSBN1LQ6PCB5 846 aaPredicted RBP22.33■■□□□ 1.17
TRIM29-219ENST00000532833 CTU1Q7Z7A3 348 aaKnown RBP22.33■■□□□ 1.17
TRIM29-219ENST00000532833 ANKIB1Q9P2G1 1089 aa22.33■■□□□ 1.17
TRIM29-219ENST00000532833 SCAF8Q9UPN6 1271 aaKnown RBP22.33■■□□□ 1.17
TRIM29-219ENST00000532833 ZNF609O15014 1411 aa22.32■■□□□ 1.16
TRIM29-219ENST00000532833 G3V3G9 751 aa22.32■■□□□ 1.16
TRIM29-219ENST00000532833 DCAF8Q5TAQ9 597 aa22.32■■□□□ 1.16
TRIM29-219ENST00000532833 DUSP27Q5VZP5 1158 aa22.32■■□□□ 1.16
TRIM29-219ENST00000532833 MOB2Q70IA6 237 aa22.32■■□□□ 1.16
TRIM29-219ENST00000532833 ZBTB38Q8NAP3 1195 aaPredicted RBP22.32■■□□□ 1.16
TRIM29-219ENST00000532833 AGBL3Q8NEM8 1001 aa22.32■■□□□ 1.16
TRIM29-219ENST00000532833 GMLQ99445 158 aa22.32■■□□□ 1.16
TRIM29-219ENST00000532833 GGA1Q9UJY5 639 aa22.32■■□□□ 1.16
TRIM29-219ENST00000532833 RALBP1Q15311 655 aa22.31■■□□□ 1.16
TRIM29-219ENST00000532833 PAPPA2Q9BXP8 1791 aa22.3■■□□□ 1.16
TRIM29-219ENST00000532833 RIC3Q7Z5B4 369 aa22.3■■□□□ 1.16
TRIM29-219ENST00000532833 JARID2Q92833 1246 aaPredicted RBP22.3■■□□□ 1.16
TRIM29-219ENST00000532833 CCDC85AQ96PX6 553 aaPredicted RBP22.3■■□□□ 1.16
TRIM29-219ENST00000532833 PHAXQ9H814 394 aaKnown RBP22.3■■□□□ 1.16
TRIM29-219ENST00000532833 MYOZ2Q9NPC6 264 aa22.3■■□□□ 1.16
TRIM29-219ENST00000532833 RUNDC1Q96C34 613 aa22.29■■□□□ 1.16
TRIM29-219ENST00000532833 WTIPA6NIX2 430 aaPredicted RBP22.28■■□□□ 1.16
TRIM29-219ENST00000532833 USP17L8P0C7I0 530 aa22.28■■□□□ 1.16
TRIM29-219ENST00000532833 FKBP1BP68106 108 aa22.28■■□□□ 1.16
TRIM29-219ENST00000532833 PRAMEF18Q5VWM3 479 aa22.28■■□□□ 1.16
TRIM29-219ENST00000532833 REM2Q8IYK8 340 aaPredicted RBP22.28■■□□□ 1.16
TRIM29-219ENST00000532833 MYD88Q99836 296 aa22.28■■□□□ 1.16
TRIM29-219ENST00000532833 MBIPQ9NS73 344 aa22.28■■□□□ 1.16
TRIM29-219ENST00000532833 HPS5Q9UPZ3 1129 aa22.28■■□□□ 1.16
TRIM29-219ENST00000532833 UBE2Q2LH0YL09 131 aa22.27■■□□□ 1.16
TRIM29-219ENST00000532833 CCDC152Q4G0S7 254 aa22.27■■□□□ 1.16
TRIM29-219ENST00000532833 PITPNM2Q9BZ72 1349 aa22.27■■□□□ 1.16
TRIM29-219ENST00000532833 PDE8AO60658 829 aa22.26■■□□□ 1.15
TRIM29-219ENST00000532833 TBC1D8O95759 1140 aa22.26■■□□□ 1.15
TRIM29-219ENST00000532833 PCCAP05165 728 aaPredicted RBP22.26■■□□□ 1.15
TRIM29-219ENST00000532833 GOLGA2Q08379 1002 aa22.26■■□□□ 1.15
TRIM29-219ENST00000532833 XDHP47989 1333 aa22.26■■□□□ 1.15
TRIM29-219ENST00000532833 USP17L3A6NCW0 530 aa22.25■■□□□ 1.15
TRIM29-219ENST00000532833 USP17L4A6NCW7 530 aa22.25■■□□□ 1.15
TRIM29-219ENST00000532833 NBPF9Q3BBW0 867 aa22.25■■□□□ 1.15
TRIM29-219ENST00000532833 USP17L1Q7RTZ2 530 aa22.25■■□□□ 1.15
TRIM29-219ENST00000532833 CCDC191Q8NCU4 936 aa22.25■■□□□ 1.15
TRIM29-219ENST00000532833 ZNF296Q8WUU4 475 aaPredicted RBP22.25■■□□□ 1.15
TRIM29-219ENST00000532833 PODNQ7Z5L7 613 aa22.24■■□□□ 1.15
TRIM29-219ENST00000532833 MXD3Q9BW11 206 aa22.24■■□□□ 1.15
TRIM29-219ENST00000532833 ADAMTS8Q9UP79 889 aa22.24■■□□□ 1.15
TRIM29-219ENST00000532833 ZNF646O15015 1829 aaPredicted RBP22.24■■□□□ 1.15
TRIM29-219ENST00000532833 ELL2O00472 640 aaPredicted RBP22.23■■□□□ 1.15
TRIM29-219ENST00000532833 ZNF853P0CG23 659 aa22.23■■□□□ 1.15
TRIM29-219ENST00000532833 HSP90B1P14625 803 aaKnown RBP22.23■■□□□ 1.15
TRIM29-219ENST00000532833 ATP2B4P23634 1241 aa22.23■■□□□ 1.15
TRIM29-219ENST00000532833 PRPF38BQ5VTL8 546 aaKnown RBP22.23■■□□□ 1.15
TRIM29-219ENST00000532833 ANKRD18AQ8IVF6 992 aa22.23■■□□□ 1.15
TRIM29-219ENST00000532833 CWC25Q9NXE8 425 aaPredicted RBP22.22■■□□□ 1.15
TRIM29-219ENST00000532833 HDAC9Q9UKV0 1011 aa22.22■■□□□ 1.15
TRIM29-219ENST00000532833 MYBBP1AQ9BQG0 1328 aaKnown RBP22.22■■□□□ 1.15
TRIM29-219ENST00000532833 PKN2Q16513 984 aaKnown RBP22.21■■□□□ 1.15
TRIM29-219ENST00000532833 SPEF2Q9C093 1822 aa22.2■■□□□ 1.14
TRIM29-219ENST00000532833 WNT10BO00744 389 aa22.2■■□□□ 1.14
TRIM29-219ENST00000532833 TM4SF4P48230 202 aa22.2■■□□□ 1.14
TRIM29-219ENST00000532833 MKRN3Q13064 507 aaKnown RBP22.2■■□□□ 1.14
TRIM29-219ENST00000532833 WDR43Q15061 677 aaKnown RBP eCLIP22.2■■□□□ 1.14
TRIM29-219ENST00000532833 DACT2Q5SW24 774 aa22.2■■□□□ 1.14
TRIM29-219ENST00000532833 METTL22Q9BUU2 404 aaPredicted RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms