RNA–Protein interactions for RNA: ENST00000532723.5

ARHGAP28-206, Transcript of Rho GTPase activating protein 28, human

TSL 3

Gene ARHGAP28, Length 709 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP28-206	ENST00000532723	GGA3	Q9NZ52	723 aa		13.94	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	CHPF2	Q9P2E5	772 aa		13.94	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	CHL1	O00533	1208 aa		13.93	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	SOX10	P56693	466 aa		13.93	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	ANKRD13D	Q6ZTN6	518 aa		13.93	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	REM2	Q8IYK8	340 aa	Predicted RBP	13.93	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	CSRNP1	Q96S65	589 aa		13.93	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	TNRC18	O15417	2968 aa	Predicted RBP	13.92	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	ATP5J2-PTCD1	G3V325	749 aa		13.92	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	RPS8	P62241	208 aa	Known RBP	13.92	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	HDGFL1	Q5TGJ6	251 aa		13.92	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	CTU1	Q7Z7A3	348 aa	Known RBP	13.92	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	CDCA5	Q96FF9	252 aa		13.92	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.92	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	PODXL2	Q9NZ53	605 aa		13.92	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	IRS4	O14654	1257 aa	Predicted RBP	13.91	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	HOXB7	P09629	217 aa		13.91	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	TRIM28	Q13263	835 aa	Known RBP	13.91	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	RASAL3	Q86YV0	1011 aa		13.91	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	DBF4	Q9UBU7	674 aa	Predicted RBP	13.91	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	ASTN2	O75129	1339 aa	Predicted RBP	13.9	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	ZNF609	O15014	1411 aa		13.9	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	PDE4DIP	Q5VU43	2346 aa		13.9	□□□□□ -0.18
ARHGAP28-206	ENST00000532723		G3V3G9	751 aa		13.9	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	ZNF280A	P59817	542 aa	Predicted RBP	13.9	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	FKBP1B	P68106	108 aa		13.9	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	RTL5	Q5HYW3	569 aa	Predicted RBP	13.9	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	DCAF8	Q5TAQ9	597 aa		13.9	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	AGBL3	Q8NEM8	1001 aa		13.9	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	TAF1	P21675	1872 aa		13.9	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	DDX60	Q8IY21	1712 aa	Known RBP	13.9	□□□□□ -0.18
ARHGAP28-206	ENST00000532723	COL4A1	P02462	1669 aa		13.89	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	UFL1	O94874	794 aa		13.89	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	SCARF1	Q14162	830 aa		13.89	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	ANGEL2	Q5VTE6	544 aa	Known RBP	13.89	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.89	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	HYPK	Q9NX55	129 aa		13.89	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	GGA1	Q9UJY5	639 aa		13.89	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	LAS1L	Q9Y4W2	734 aa	Known RBP	13.89	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	HSP90B1	P14625	803 aa	Known RBP	13.88	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	NEUROD2	Q15784	382 aa		13.88	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	PRPF38B	Q5VTL8	546 aa	Known RBP	13.88	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.88	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	SEC31B	Q9NQW1	1179 aa		13.88	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	ANKIB1	Q9P2G1	1089 aa		13.88	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	PITPNM2	Q9BZ72	1349 aa		13.88	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	PKN2	Q16513	984 aa	Known RBP	13.87	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	GML	Q99445	158 aa		13.87	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	TRIM35	Q9UPQ4	493 aa		13.87	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	HPS5	Q9UPZ3	1129 aa		13.87	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	USP17L8	P0C7I0	530 aa		13.86	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	RALBP1	Q15311	655 aa		13.86	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	CCDC152	Q4G0S7	254 aa		13.86	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	CCDC146	Q8IYE0	955 aa		13.86	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	MYOZ2	Q9NPC6	264 aa		13.86	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	GOLGA2	Q08379	1002 aa		13.85	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	DUSP27	Q5VZP5	1158 aa		13.85	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	RIC3	Q7Z5B4	369 aa		13.85	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	HDAC9	Q9UKV0	1011 aa		13.85	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	XDH	P47989	1333 aa		13.85	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	PAPPA2	Q9BXP8	1791 aa		13.84	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	SCN9A	Q15858	1988 aa		13.84	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	USP17L3	A6NCW0	530 aa		13.84	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	USP17L4	A6NCW7	530 aa		13.84	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	PDE8A	O60658	829 aa		13.84	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	PCCA	P05165	728 aa	Predicted RBP	13.84	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	MOB2	Q70IA6	237 aa		13.84	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	USP17L1	Q7RTZ2	530 aa		13.84	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	PODN	Q7Z5L7	613 aa		13.84	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	CCDC191	Q8NCU4	936 aa		13.84	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.84	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	RUNDC1	Q96C34	613 aa		13.84	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	POLR2A	P24928	1970 aa	Known RBP	13.83	□□□□□ -0.19
ARHGAP28-206	ENST00000532723	UBE2Q2L	H0YL09	131 aa		13.83	□□□□□ -0.2
ARHGAP28-206	ENST00000532723	TBC1D8	O95759	1140 aa		13.83	□□□□□ -0.2
ARHGAP28-206	ENST00000532723	ATP2B4	P23634	1241 aa		13.83	□□□□□ -0.2
ARHGAP28-206	ENST00000532723	NOM1	Q5C9Z4	860 aa	Known RBP	13.83	□□□□□ -0.2
ARHGAP28-206	ENST00000532723	ANKRD18A	Q8IVF6	992 aa		13.83	□□□□□ -0.2
ARHGAP28-206	ENST00000532723	TM4SF4	P48230	202 aa		13.82	□□□□□ -0.2
ARHGAP28-206	ENST00000532723	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.82	□□□□□ -0.2
ARHGAP28-206	ENST00000532723	MYD88	Q99836	296 aa		13.82	□□□□□ -0.2
ARHGAP28-206	ENST00000532723	PHAX	Q9H814	394 aa	Known RBP	13.82	□□□□□ -0.2
ARHGAP28-206	ENST00000532723	MBIP	Q9NS73	344 aa		13.82	□□□□□ -0.2
ARHGAP28-206	ENST00000532723	SCAF8	Q9UPN6	1271 aa	Known RBP	13.82	□□□□□ -0.2
ARHGAP28-206	ENST00000532723	AKAP11	Q9UKA4	1901 aa		13.82	□□□□□ -0.2
ARHGAP28-206	ENST00000532723	GPR25	O00155	361 aa		13.81	□□□□□ -0.2
ARHGAP28-206	ENST00000532723	NBPF9	Q3BBW0	867 aa		13.81	□□□□□ -0.2
ARHGAP28-206	ENST00000532723	PRAMEF18	Q5VWM3	479 aa		13.81	□□□□□ -0.2
ARHGAP28-206	ENST00000532723	CWC25	Q9NXE8	425 aa	Predicted RBP	13.81	□□□□□ -0.2
ARHGAP28-206	ENST00000532723	NF2	P35240	595 aa		13.8	□□□□□ -0.2
ARHGAP28-206	ENST00000532723	TTLL12	Q14166	644 aa	Predicted RBP	13.8	□□□□□ -0.2
ARHGAP28-206	ENST00000532723	WDR43	Q15061	677 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
ARHGAP28-206	ENST00000532723	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.8	□□□□□ -0.2
ARHGAP28-206	ENST00000532723	OGFOD1	Q8N543	542 aa		13.8	□□□□□ -0.2
ARHGAP28-206	ENST00000532723	JARID2	Q92833	1246 aa	Predicted RBP	13.8	□□□□□ -0.2
ARHGAP28-206	ENST00000532723	CDC5L	Q99459	802 aa	Known RBP	13.8	□□□□□ -0.2
ARHGAP28-206	ENST00000532723	CFHR5	Q9BXR6	569 aa		13.8	□□□□□ -0.2
ARHGAP28-206	ENST00000532723	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.8	□□□□□ -0.2
ARHGAP28-206	ENST00000532723	MED23	Q9ULK4	1368 aa		13.8	□□□□□ -0.2
ARHGAP28-206	ENST00000532723	WNT10B	O00744	389 aa		13.79	□□□□□ -0.2

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