RNA–Protein interactions for RNA: ENST00000532699.1

SDHD-213, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 3

Gene SDHD, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-213ENST00000532699 TMX4Q9H1E5 349 aaPredicted RBP16.16■□□□□ 0.18
SDHD-213ENST00000532699 NEURL1BA8MQ27 555 aa16.15■□□□□ 0.18
SDHD-213ENST00000532699 ECE2O60344 883 aa16.15■□□□□ 0.18
SDHD-213ENST00000532699 CASP7P55210 303 aa16.15■□□□□ 0.18
SDHD-213ENST00000532699 NCBP3Q53F19 620 aaKnown RBP16.15■□□□□ 0.18
SDHD-213ENST00000532699 CNOT7Q9UIV1 285 aaKnown RBP16.15■□□□□ 0.18
SDHD-213ENST00000532699 C6orf229H3BNL8 230 aa16.14■□□□□ 0.17
SDHD-213ENST00000532699 VAMP4O75379 141 aa16.14■□□□□ 0.17
SDHD-213ENST00000532699 DEFB115Q30KQ5 88 aa16.14■□□□□ 0.17
SDHD-213ENST00000532699 SAMD7Q7Z3H4 446 aa16.14■□□□□ 0.17
SDHD-213ENST00000532699 MICALL2Q8IY33 904 aa16.14■□□□□ 0.17
SDHD-213ENST00000532699 TTLL11Q8NHH1 800 aa16.14■□□□□ 0.17
SDHD-213ENST00000532699 WBP1LQ9NX94 342 aa16.14■□□□□ 0.17
SDHD-213ENST00000532699 SALL2Q9Y467 1007 aaPredicted RBP16.14■□□□□ 0.17
SDHD-213ENST00000532699 CASP8AP2Q9UKL3 1982 aa16.14■□□□□ 0.17
SDHD-213ENST00000532699 H7C1W4 665 aa16.13■□□□□ 0.17
SDHD-213ENST00000532699 SLC4A2P04920 1241 aa16.13■□□□□ 0.17
SDHD-213ENST00000532699 CTSWP56202 376 aa16.13■□□□□ 0.17
SDHD-213ENST00000532699 TNIP1Q15025 636 aa16.13■□□□□ 0.17
SDHD-213ENST00000532699 GREM2Q9H772 168 aa16.13■□□□□ 0.17
SDHD-213ENST00000532699 WDR33Q9C0J8 1336 aaKnown RBP16.13■□□□□ 0.17
SDHD-213ENST00000532699 DDX58O95786 925 aaKnown RBP16.12■□□□□ 0.17
SDHD-213ENST00000532699 CCDC152Q4G0S7 254 aa16.12■□□□□ 0.17
SDHD-213ENST00000532699 DPF2Q92785 391 aa16.12■□□□□ 0.17
SDHD-213ENST00000532699 BCL2L13Q9BXK5 485 aa16.12■□□□□ 0.17
SDHD-213ENST00000532699 TLL2Q9Y6L7 1015 aa16.12■□□□□ 0.17
SDHD-213ENST00000532699 ASTN2O75129 1339 aaPredicted RBP16.12■□□□□ 0.17
SDHD-213ENST00000532699 UFL1O94874 794 aa16.11■□□□□ 0.17
SDHD-213ENST00000532699 EXOSC9Q06265 439 aaKnown RBP16.11■□□□□ 0.17
SDHD-213ENST00000532699 FLIIQ13045 1269 aa16.11■□□□□ 0.17
SDHD-213ENST00000532699 CYP4F22Q6NT55 531 aa16.11■□□□□ 0.17
SDHD-213ENST00000532699 ABT1Q9ULW3 272 aaKnown RBP16.11■□□□□ 0.17
SDHD-213ENST00000532699 ZNF609O15014 1411 aa16.11■□□□□ 0.17
SDHD-213ENST00000532699 VIL1P09327 827 aaKnown RBP16.1■□□□□ 0.17
SDHD-213ENST00000532699 ZEB1P37275 1124 aaPredicted RBP16.1■□□□□ 0.17
SDHD-213ENST00000532699 TBC1D10BQ4KMP7 808 aaPredicted RBP16.1■□□□□ 0.17
SDHD-213ENST00000532699 WDR63Q8IWG1 891 aa16.1■□□□□ 0.17
SDHD-213ENST00000532699 TNS4Q8IZW8 715 aa16.1■□□□□ 0.17
SDHD-213ENST00000532699 ZC3H15Q8WU90 426 aaKnown RBP16.1■□□□□ 0.17
SDHD-213ENST00000532699 ANP32CO43423 234 aa16.09■□□□□ 0.17
SDHD-213ENST00000532699 GCKRQ14397 625 aa16.09■□□□□ 0.17
SDHD-213ENST00000532699 UBE3BQ7Z3V4 1068 aa16.09■□□□□ 0.17
SDHD-213ENST00000532699 SAPCD2Q86UD0 394 aa16.09■□□□□ 0.17
SDHD-213ENST00000532699 TXNRD3Q86VQ6 643 aa16.09■□□□□ 0.17
SDHD-213ENST00000532699 CAPNS2Q96L46 248 aa16.09■□□□□ 0.17
SDHD-213ENST00000532699 GMLQ99445 158 aa16.09■□□□□ 0.17
SDHD-213ENST00000532699 STK31Q9BXU1 1019 aa16.09■□□□□ 0.17
SDHD-213ENST00000532699 GGA1Q9UJY5 639 aa16.09■□□□□ 0.17
SDHD-213ENST00000532699 MINPP1Q9UNW1 487 aa16.09■□□□□ 0.17
SDHD-213ENST00000532699 ECM29Q5VYK3 1845 aa16.08■□□□□ 0.17
SDHD-213ENST00000532699 AOC2O75106 756 aa16.08■□□□□ 0.16
SDHD-213ENST00000532699 CELF2O95319 508 aaKnown RBP16.08■□□□□ 0.16
SDHD-213ENST00000532699 HSPA8P11142 646 aaKnown RBP16.08■□□□□ 0.16
SDHD-213ENST00000532699 USP48Q86UV5 1035 aa16.08■□□□□ 0.16
SDHD-213ENST00000532699 ANKRD18AQ8IVF6 992 aa16.08■□□□□ 0.16
SDHD-213ENST00000532699 EYA3Q99504 573 aa16.08■□□□□ 0.16
SDHD-213ENST00000532699 PLA2G12BQ9BX93 195 aa16.08■□□□□ 0.16
SDHD-213ENST00000532699 ANKIB1Q9P2G1 1089 aa16.08■□□□□ 0.16
SDHD-213ENST00000532699 XDHP47989 1333 aa16.08■□□□□ 0.16
SDHD-213ENST00000532699 AKAP11Q9UKA4 1901 aa16.07■□□□□ 0.16
SDHD-213ENST00000532699 F6X3S4 739 aa16.07■□□□□ 0.16
SDHD-213ENST00000532699 H7C1D1 291 aa16.07■□□□□ 0.16
SDHD-213ENST00000532699 CSF1RP07333 972 aa16.07■□□□□ 0.16
SDHD-213ENST00000532699 KLRK1P26718 216 aa16.07■□□□□ 0.16
SDHD-213ENST00000532699 DNAAF4Q8WXU2 420 aa16.07■□□□□ 0.16
SDHD-213ENST00000532699 ZIC5Q96T25 663 aa16.07■□□□□ 0.16
SDHD-213ENST00000532699 ZC3H12CQ9C0D7 883 aaKnown RBP16.07■□□□□ 0.16
SDHD-213ENST00000532699 BSDC1Q9NW68 430 aaPredicted RBP16.07■□□□□ 0.16
SDHD-213ENST00000532699 ZNF521Q96K83 1311 aa16.07■□□□□ 0.16
SDHD-213ENST00000532699 IRS2Q9Y4H2 1338 aa16.06■□□□□ 0.16
SDHD-213ENST00000532699 ADM5C9JUS6 153 aa16.06■□□□□ 0.16
SDHD-213ENST00000532699 HSP90B1P14625 803 aaKnown RBP16.06■□□□□ 0.16
SDHD-213ENST00000532699 RPS12P25398 132 aaKnown RBP16.06■□□□□ 0.16
SDHD-213ENST00000532699 LBX1P52954 281 aa16.06■□□□□ 0.16
SDHD-213ENST00000532699 FAM161AQ3B820 660 aa16.06■□□□□ 0.16
SDHD-213ENST00000532699 MED23Q9ULK4 1368 aa16.05■□□□□ 0.16
SDHD-213ENST00000532699 CAPN15O75808 1086 aa16.05■□□□□ 0.16
SDHD-213ENST00000532699 ZNF280AP59817 542 aaPredicted RBP16.05■□□□□ 0.16
SDHD-213ENST00000532699 FOXO4P98177 505 aa16.05■□□□□ 0.16
SDHD-213ENST00000532699 NEXNQ0ZGT2 675 aa16.05■□□□□ 0.16
SDHD-213ENST00000532699 FKBP5Q13451 457 aaPredicted RBP16.05■□□□□ 0.16
SDHD-213ENST00000532699 RBM26Q5T8P6 1007 aaKnown RBP16.05■□□□□ 0.16
SDHD-213ENST00000532699 RSBN1LQ6PCB5 846 aaPredicted RBP16.05■□□□□ 0.16
SDHD-213ENST00000532699 CDC37L1Q7L3B6 337 aa16.05■□□□□ 0.16
SDHD-213ENST00000532699 MXD3Q9BW11 206 aa16.05■□□□□ 0.16
SDHD-213ENST00000532699 CHMP4AQ9BY43 222 aa16.05■□□□□ 0.16
SDHD-213ENST00000532699 PRDM10Q9NQV6 1147 aa16.05■□□□□ 0.16
SDHD-213ENST00000532699 ATP2B4P23634 1241 aa16.04■□□□□ 0.16
SDHD-213ENST00000532699 CTCFP49711 727 aaPredicted RBP16.04■□□□□ 0.16
SDHD-213ENST00000532699 CCT4P50991 539 aaKnown RBP16.04■□□□□ 0.16
SDHD-213ENST00000532699 EPHA10Q5JZY3 1008 aa16.04■□□□□ 0.16
SDHD-213ENST00000532699 BEND3Q5T5X7 828 aa16.04■□□□□ 0.16
SDHD-213ENST00000532699 FAM9BQ8IZU0 186 aa16.04■□□□□ 0.16
SDHD-213ENST00000532699 LINS1Q8NG48 757 aa16.04■□□□□ 0.16
SDHD-213ENST00000532699 CDC5LQ99459 802 aaKnown RBP16.04■□□□□ 0.16
SDHD-213ENST00000532699 ZNF408Q9H9D4 720 aa16.04■□□□□ 0.16
SDHD-213ENST00000532699 SNAP23O00161 211 aa16.03■□□□□ 0.16
SDHD-213ENST00000532699 ITGA6P23229 1130 aa16.03■□□□□ 0.16
SDHD-213ENST00000532699 GRM1Q13255 1194 aa16.03■□□□□ 0.16
SDHD-213ENST00000532699 KIF4BQ2VIQ3 1234 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms