RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 IRX5P78411 483 aaPredicted RBP17.49■□□□□ 0.39
NXF1-213ENST00000532297 PTPN14Q15678 1187 aa17.49■□□□□ 0.39
NXF1-213ENST00000532297 CHRNA2Q15822 529 aa17.49■□□□□ 0.39
NXF1-213ENST00000532297 AMOTQ4VCS5 1084 aa17.49■□□□□ 0.39
NXF1-213ENST00000532297 SPATA32Q96LK8 384 aa17.49■□□□□ 0.39
NXF1-213ENST00000532297 DDX21Q9NR30 783 aaKnown RBP eCLIP17.49■□□□□ 0.39
NXF1-213ENST00000532297 DDX19AQ9NUU7 478 aaKnown RBP17.49■□□□□ 0.39
NXF1-213ENST00000532297 HDAC5Q9UQL6 1122 aa17.49■□□□□ 0.39
NXF1-213ENST00000532297 HEG1Q9ULI3 1381 aa17.49■□□□□ 0.39
NXF1-213ENST00000532297 KDM6AO15550 1401 aaPredicted RBP17.49■□□□□ 0.39
NXF1-213ENST00000532297 A0A0G2JLW4 131 aa17.49■□□□□ 0.39
NXF1-213ENST00000532297 TOB2Q14106 344 aaPredicted RBP17.49■□□□□ 0.39
NXF1-213ENST00000532297 LARP1Q6PKG0 1096 aaKnown RBP17.49■□□□□ 0.39
NXF1-213ENST00000532297 LRRC8AQ8IWT6 810 aa17.49■□□□□ 0.39
NXF1-213ENST00000532297 MAP4K1Q92918 833 aa17.49■□□□□ 0.39
NXF1-213ENST00000532297 TFCP2Q12800 502 aa17.48■□□□□ 0.39
NXF1-213ENST00000532297 ZNF790Q6PG37 636 aa17.48■□□□□ 0.39
NXF1-213ENST00000532297 FBXO38Q6PIJ6 1188 aa17.48■□□□□ 0.39
NXF1-213ENST00000532297 UBE3BQ7Z3V4 1068 aa17.48■□□□□ 0.39
NXF1-213ENST00000532297 CLSTN2Q9H4D0 955 aa17.48■□□□□ 0.39
NXF1-213ENST00000532297 DBNLQ9UJU6 430 aaKnown RBP17.48■□□□□ 0.39
NXF1-213ENST00000532297 PDE4CQ08493 712 aa17.48■□□□□ 0.39
NXF1-213ENST00000532297 ARID5BQ14865 1188 aa17.48■□□□□ 0.39
NXF1-213ENST00000532297 ELF2Q15723 593 aa17.48■□□□□ 0.39
NXF1-213ENST00000532297 TIGD1Q96MW7 591 aa17.48■□□□□ 0.39
NXF1-213ENST00000532297 TM6SF1Q9BZW5 370 aa17.48■□□□□ 0.39
NXF1-213ENST00000532297 SCAND2PQ9GZW5 306 aaPredicted RBP17.48■□□□□ 0.39
NXF1-213ENST00000532297 NPHP3Q7Z494 1330 aa17.47■□□□□ 0.39
NXF1-213ENST00000532297 NR1I2O75469 434 aa17.47■□□□□ 0.39
NXF1-213ENST00000532297 RBM43Q6ZSC3 357 aaKnown RBP17.47■□□□□ 0.39
NXF1-213ENST00000532297 DDX46Q7L014 1031 aaKnown RBP17.47■□□□□ 0.39
NXF1-213ENST00000532297 GCKRQ14397 625 aa17.46■□□□□ 0.39
NXF1-213ENST00000532297 BLOC1S2Q6QNY1 142 aa17.46■□□□□ 0.39
NXF1-213ENST00000532297 KRT28Q7Z3Y7 464 aa17.46■□□□□ 0.39
NXF1-213ENST00000532297 ST7Q9NRC1 585 aa17.46■□□□□ 0.39
NXF1-213ENST00000532297 CDC25BP30305 580 aa17.46■□□□□ 0.39
NXF1-213ENST00000532297 RBM6P78332 1123 aaKnown RBP17.46■□□□□ 0.39
NXF1-213ENST00000532297 BICD2Q8TD16 824 aa17.46■□□□□ 0.39
NXF1-213ENST00000532297 ERO1AQ96HE7 468 aa17.46■□□□□ 0.39
NXF1-213ENST00000532297 DBNDD2Q9BQY9 259 aa17.46■□□□□ 0.39
NXF1-213ENST00000532297 FAM53CQ9NYF3 392 aa17.46■□□□□ 0.39
NXF1-213ENST00000532297 ERBB3P21860 1342 aa17.46■□□□□ 0.38
NXF1-213ENST00000532297 GOLGA6L19H0YKK7 550 aa17.45■□□□□ 0.38
NXF1-213ENST00000532297 SKILP12757 684 aa17.45■□□□□ 0.38
NXF1-213ENST00000532297 PDCP20941 246 aa17.45■□□□□ 0.38
NXF1-213ENST00000532297 CEBPZQ03701 1054 aaKnown RBP17.45■□□□□ 0.38
NXF1-213ENST00000532297 NYAP1Q6ZVC0 841 aa17.45■□□□□ 0.38
NXF1-213ENST00000532297 TRMT1Q9NXH9 659 aaKnown RBP17.45■□□□□ 0.38
NXF1-213ENST00000532297 MEGF6O75095 1541 aa17.45■□□□□ 0.38
NXF1-213ENST00000532297 MED23Q9ULK4 1368 aa17.45■□□□□ 0.38
NXF1-213ENST00000532297 A0A087WWV3 80 aa17.45■□□□□ 0.38
NXF1-213ENST00000532297 LEO1Q8WVC0 666 aaPredicted RBP17.45■□□□□ 0.38
NXF1-213ENST00000532297 KCNB2Q92953 911 aa17.45■□□□□ 0.38
NXF1-213ENST00000532297 NPHP1O15259 732 aa17.45■□□□□ 0.38
NXF1-213ENST00000532297 DDX58O95786 925 aaKnown RBP17.45■□□□□ 0.38
NXF1-213ENST00000532297 FTOQ9C0B1 505 aaKnown RBP eCLIP17.45■□□□□ 0.38
NXF1-213ENST00000532297 NAP1L2Q9ULW6 460 aaPredicted RBP17.45■□□□□ 0.38
NXF1-213ENST00000532297 PDIA4P13667 645 aaKnown RBP17.44■□□□□ 0.38
NXF1-213ENST00000532297 RPS6KB1P23443 525 aa17.44■□□□□ 0.38
NXF1-213ENST00000532297 AFDNP55196 1824 aaKnown RBP17.44■□□□□ 0.38
NXF1-213ENST00000532297 ZNF609O15014 1411 aa17.44■□□□□ 0.38
NXF1-213ENST00000532297 HIP1O00291 1037 aa17.44■□□□□ 0.38
NXF1-213ENST00000532297 NEMFO60524 1076 aa17.44■□□□□ 0.38
NXF1-213ENST00000532297 SLC52A2Q9HAB3 445 aa17.44■□□□□ 0.38
NXF1-213ENST00000532297 CALCOCO1Q9P1Z2 691 aa17.43■□□□□ 0.38
NXF1-213ENST00000532297 NCAPD2Q15021 1401 aa17.43■□□□□ 0.38
NXF1-213ENST00000532297 TAF5LO75529 589 aa17.43■□□□□ 0.38
NXF1-213ENST00000532297 SLU7O95391 586 aaKnown RBP17.43■□□□□ 0.38
NXF1-213ENST00000532297 CSB-PGBD3P0DP91 1061 aa17.43■□□□□ 0.38
NXF1-213ENST00000532297 RAPGEF4Q8WZA2 1011 aa17.43■□□□□ 0.38
NXF1-213ENST00000532297 SLIT3O75094 1523 aa17.42■□□□□ 0.38
NXF1-213ENST00000532297 UTYO14607 1347 aa17.42■□□□□ 0.38
NXF1-213ENST00000532297 PHRF1Q9P1Y6 1649 aaKnown RBP17.42■□□□□ 0.38
NXF1-213ENST00000532297 PSMA5P28066 241 aa17.42■□□□□ 0.38
NXF1-213ENST00000532297 PTPN12Q05209 780 aaKnown RBP17.42■□□□□ 0.38
NXF1-213ENST00000532297 FILIP1Q7Z7B0 1213 aa17.42■□□□□ 0.38
NXF1-213ENST00000532297 HSP90B1P14625 803 aaKnown RBP17.42■□□□□ 0.38
NXF1-213ENST00000532297 NEXNQ0ZGT2 675 aa17.42■□□□□ 0.38
NXF1-213ENST00000532297 TNNI3KQ59H18 835 aa17.42■□□□□ 0.38
NXF1-213ENST00000532297 PGBD1Q96JS3 809 aa17.42■□□□□ 0.38
NXF1-213ENST00000532297 ZNF446Q9NWS9 450 aa17.42■□□□□ 0.38
NXF1-213ENST00000532297 FPGT-TNNI3KV9GXZ4 949 aa17.42■□□□□ 0.38
NXF1-213ENST00000532297 CCDC69A6NI79 296 aa17.41■□□□□ 0.38
NXF1-213ENST00000532297 CAVIN2O95810 425 aa17.41■□□□□ 0.38
NXF1-213ENST00000532297 PHKG2P15735 406 aa17.41■□□□□ 0.38
NXF1-213ENST00000532297 CHST3Q7LGC8 479 aa17.41■□□□□ 0.38
NXF1-213ENST00000532297 MRFAP1L1Q96HT8 127 aa17.41■□□□□ 0.38
NXF1-213ENST00000532297 RFX5P48382 616 aaPredicted RBP17.41■□□□□ 0.38
NXF1-213ENST00000532297 IQCB1Q15051 598 aa17.41■□□□□ 0.38
NXF1-213ENST00000532297 SARM1Q6SZW1 724 aa17.41■□□□□ 0.38
NXF1-213ENST00000532297 METTL22Q9BUU2 404 aaPredicted RBP17.41■□□□□ 0.38
NXF1-213ENST00000532297 RNF20Q5VTR2 975 aa17.4■□□□□ 0.38
NXF1-213ENST00000532297 ANKRD13DQ6ZTN6 518 aa17.4■□□□□ 0.38
NXF1-213ENST00000532297 Q6ZUG5 572 aa17.4■□□□□ 0.38
NXF1-213ENST00000532297 C11orf57Q6ZUT1 292 aaPredicted RBP17.4■□□□□ 0.38
NXF1-213ENST00000532297 STOX1Q6ZVD7 989 aa17.4■□□□□ 0.38
NXF1-213ENST00000532297 NOL10Q9BSC4 688 aaKnown RBP17.4■□□□□ 0.38
NXF1-213ENST00000532297 TRPM3Q9HCF6 1732 aaPredicted RBP17.4■□□□□ 0.38
NXF1-213ENST00000532297 CYP27B1O15528 508 aa17.4■□□□□ 0.38
NXF1-213ENST00000532297 CCZ1BP86790 482 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms