RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 TSHZ3Q63HK5 1081 aa14.78□□□□□ -0.04
CHD7-211ENST00000532149 INTS5Q6P9B9 1019 aaKnown RBP14.78□□□□□ -0.04
CHD7-211ENST00000532149 SLC39A7Q92504 469 aa14.78□□□□□ -0.04
CHD7-211ENST00000532149 C8orf37Q96NL8 207 aa14.78□□□□□ -0.04
CHD7-211ENST00000532149 LSG1Q9H089 658 aaKnown RBP14.78□□□□□ -0.04
CHD7-211ENST00000532149 TRMT112Q9UI30 125 aaKnown RBP14.78□□□□□ -0.04
CHD7-211ENST00000532149 DBNLQ9UJU6 430 aaKnown RBP14.78□□□□□ -0.04
CHD7-211ENST00000532149 MROH5Q6ZUA9 1318 aa14.77□□□□□ -0.04
CHD7-211ENST00000532149 IRS4O14654 1257 aaPredicted RBP14.77□□□□□ -0.05
CHD7-211ENST00000532149 NEK4P51957 841 aa14.77□□□□□ -0.05
CHD7-211ENST00000532149 ANKRD1Q15327 319 aa14.77□□□□□ -0.05
CHD7-211ENST00000532149 SKOR2Q2VWA4 1001 aaPredicted RBP14.77□□□□□ -0.05
CHD7-211ENST00000532149 CWC27Q6UX04 472 aaKnown RBP14.77□□□□□ -0.05
CHD7-211ENST00000532149 KBTBD3Q8NAB2 608 aa14.77□□□□□ -0.05
CHD7-211ENST00000532149 MAP4K1Q92918 833 aa14.77□□□□□ -0.05
CHD7-211ENST00000532149 ZSCAN31Q96LW9 406 aaPredicted RBP14.77□□□□□ -0.05
CHD7-211ENST00000532149 UTP14AQ9BVJ6 771 aaKnown RBP14.77□□□□□ -0.05
CHD7-211ENST00000532149 ALDH8A1Q9H2A2 487 aaPredicted RBP14.77□□□□□ -0.05
CHD7-211ENST00000532149 HELLSQ9NRZ9 838 aa14.77□□□□□ -0.05
CHD7-211ENST00000532149 ZNF330Q9Y3S2 320 aaPredicted RBP14.77□□□□□ -0.05
CHD7-211ENST00000532149 CCDC171Q6TFL3 1326 aa14.76□□□□□ -0.05
CHD7-211ENST00000532149 C7P10643 843 aa14.76□□□□□ -0.05
CHD7-211ENST00000532149 ZSCAN25Q6NSZ9 544 aa14.76□□□□□ -0.05
CHD7-211ENST00000532149 TTLL11Q8NHH1 800 aa14.76□□□□□ -0.05
CHD7-211ENST00000532149 ARXQ96QS3 562 aa14.76□□□□□ -0.05
CHD7-211ENST00000532149 BOLA2Q9H3K6 86 aa14.76□□□□□ -0.05
CHD7-211ENST00000532149 ZNF609O15014 1411 aa14.75□□□□□ -0.05
CHD7-211ENST00000532149 THSD7AQ9UPZ6 1657 aa14.75□□□□□ -0.05
CHD7-211ENST00000532149 POTEFA5A3E0 1075 aa14.75□□□□□ -0.05
CHD7-211ENST00000532149 IGSF3O75054 1194 aa14.75□□□□□ -0.05
CHD7-211ENST00000532149 CUL4AQ13619 759 aa14.75□□□□□ -0.05
CHD7-211ENST00000532149 RAB3GAP1Q15042 981 aa14.75□□□□□ -0.05
CHD7-211ENST00000532149 TTF1Q15361 905 aaPredicted RBP14.75□□□□□ -0.05
CHD7-211ENST00000532149 FAM98CQ17RN3 349 aaKnown RBP14.75□□□□□ -0.05
CHD7-211ENST00000532149 CCDC152Q4G0S7 254 aa14.75□□□□□ -0.05
CHD7-211ENST00000532149 GORABQ5T7V8 394 aa14.75□□□□□ -0.05
CHD7-211ENST00000532149 FAM89AQ96GI7 184 aa14.75□□□□□ -0.05
CHD7-211ENST00000532149 SH2B1Q9NRF2 756 aaPredicted RBP14.75□□□□□ -0.05
CHD7-211ENST00000532149 TRPC5Q9UL62 973 aaPredicted RBP14.75□□□□□ -0.05
CHD7-211ENST00000532149 HMGB1P09429 215 aaKnown RBP14.74□□□□□ -0.05
CHD7-211ENST00000532149 UQCRFS1P1P0C7P4 283 aa14.74□□□□□ -0.05
CHD7-211ENST00000532149 SSFA2P28290 1259 aa14.74□□□□□ -0.05
CHD7-211ENST00000532149 NECTIN1Q15223 517 aa14.74□□□□□ -0.05
CHD7-211ENST00000532149 HLFQ16534 295 aa14.74□□□□□ -0.05
CHD7-211ENST00000532149 MCMDC2Q4G0Z9 681 aa14.74□□□□□ -0.05
CHD7-211ENST00000532149 VPS53Q5VIR6 699 aa14.74□□□□□ -0.05
CHD7-211ENST00000532149 LDHAL6AQ6ZMR3 332 aa14.74□□□□□ -0.05
CHD7-211ENST00000532149 KLHDC4Q8TBB5 520 aa14.74□□□□□ -0.05
CHD7-211ENST00000532149 GJD4Q96KN9 370 aaPredicted RBP14.74□□□□□ -0.05
CHD7-211ENST00000532149 NEUROD6Q96NK8 337 aa14.74□□□□□ -0.05
CHD7-211ENST00000532149 NYXQ9GZU5 481 aa14.74□□□□□ -0.05
CHD7-211ENST00000532149 COL5A3P25940 1745 aaPredicted RBP14.74□□□□□ -0.05
CHD7-211ENST00000532149 A0A1B0GUL7 405 aa14.73□□□□□ -0.05
CHD7-211ENST00000532149 CAMTA2O94983 1202 aa14.73□□□□□ -0.05
CHD7-211ENST00000532149 IFIT1P09914 478 aaKnown RBP14.73□□□□□ -0.05
CHD7-211ENST00000532149 ITGA6P23229 1130 aa14.73□□□□□ -0.05
CHD7-211ENST00000532149 KCNJ4P48050 445 aa14.73□□□□□ -0.05
CHD7-211ENST00000532149 MEX3CQ5U5Q3 659 aaKnown RBP14.73□□□□□ -0.05
CHD7-211ENST00000532149 USPL1Q5W0Q7 1092 aa14.73□□□□□ -0.05
CHD7-211ENST00000532149 TMED8Q6PL24 325 aaPredicted RBP14.73□□□□□ -0.05
CHD7-211ENST00000532149 CDC5LQ99459 802 aaKnown RBP14.73□□□□□ -0.05
CHD7-211ENST00000532149 DBNDD2Q9BQY9 259 aa14.73□□□□□ -0.05
CHD7-211ENST00000532149 PAG1Q9NWQ8 432 aa14.73□□□□□ -0.05
CHD7-211ENST00000532149 RIPOR2Q9Y4F9 1068 aa14.73□□□□□ -0.05
CHD7-211ENST00000532149 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.73□□□□□ -0.05
CHD7-211ENST00000532149 CYP46A1Q9Y6A2 500 aa14.73□□□□□ -0.05
CHD7-211ENST00000532149 MED23Q9ULK4 1368 aa14.73□□□□□ -0.05
CHD7-211ENST00000532149 NHSQ6T4R5 1651 aa14.72□□□□□ -0.05
CHD7-211ENST00000532149 MCM4P33991 863 aa14.72□□□□□ -0.05
CHD7-211ENST00000532149 TIE1P35590 1138 aa14.72□□□□□ -0.05
CHD7-211ENST00000532149 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.72□□□□□ -0.05
CHD7-211ENST00000532149 ZSWIM6Q9HCJ5 1215 aa14.72□□□□□ -0.05
CHD7-211ENST00000532149 CNNM1Q9NRU3 951 aa14.72□□□□□ -0.05
CHD7-211ENST00000532149 ISY1Q9ULR0 285 aaKnown RBP14.72□□□□□ -0.05
CHD7-211ENST00000532149 LIMCH1Q9UPQ0 1083 aa14.72□□□□□ -0.05
CHD7-211ENST00000532149 SNX14Q9Y5W7 946 aa14.72□□□□□ -0.05
CHD7-211ENST00000532149 RPS6KA4O75676 772 aa14.71□□□□□ -0.05
CHD7-211ENST00000532149 PDE8BO95263 885 aa14.71□□□□□ -0.05
CHD7-211ENST00000532149 MAP4K4O95819 1239 aaPredicted RBP14.71□□□□□ -0.05
CHD7-211ENST00000532149 NMIQ13287 307 aaPredicted RBP14.71□□□□□ -0.05
CHD7-211ENST00000532149 METTL24Q5JXM2 366 aa14.71□□□□□ -0.05
CHD7-211ENST00000532149 TTC39AQ5SRH9 613 aa14.71□□□□□ -0.05
CHD7-211ENST00000532149 ACSBG1Q96GR2 724 aa14.71□□□□□ -0.05
CHD7-211ENST00000532149 DSCC1Q9BVC3 393 aa14.71□□□□□ -0.05
CHD7-211ENST00000532149 CTNNA3Q9UI47 895 aa14.71□□□□□ -0.05
CHD7-211ENST00000532149 TBC1D2BQ9UPU7 963 aa14.71□□□□□ -0.05
CHD7-211ENST00000532149 LAMB2P55268 1798 aa14.7□□□□□ -0.06
CHD7-211ENST00000532149 ATRNO75882 1429 aa14.7□□□□□ -0.06
CHD7-211ENST00000532149 FRAT2O75474 233 aaPredicted RBP14.7□□□□□ -0.06
CHD7-211ENST00000532149 PUM3Q15397 648 aaKnown RBP14.7□□□□□ -0.06
CHD7-211ENST00000532149 ATP2B3Q16720 1220 aa14.7□□□□□ -0.06
CHD7-211ENST00000532149 SLC10A5Q5PT55 438 aa14.7□□□□□ -0.06
CHD7-211ENST00000532149 LPIN2Q92539 896 aa14.7□□□□□ -0.06
CHD7-211ENST00000532149 JARID2Q92833 1246 aaPredicted RBP14.7□□□□□ -0.06
CHD7-211ENST00000532149 TMX3Q96JJ7 454 aa14.7□□□□□ -0.06
CHD7-211ENST00000532149 MPHOSPH8Q99549 860 aa14.7□□□□□ -0.06
CHD7-211ENST00000532149 TLR7Q9NYK1 1049 aaKnown RBP14.7□□□□□ -0.06
CHD7-211ENST00000532149 TAF5LO75529 589 aa14.69□□□□□ -0.06
CHD7-211ENST00000532149 GPTP24298 496 aa14.69□□□□□ -0.06
CHD7-211ENST00000532149 IGHMBP2P38935 993 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms