RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 KRT26Q7Z3Y9 468 aa22.52■■□□□ 1.2
PKP3-208ENST00000531857 CFAP44Q96MT7 982 aa22.52■■□□□ 1.2
PKP3-208ENST00000531857 MCOLN1Q9GZU1 580 aa22.52■■□□□ 1.2
PKP3-208ENST00000531857 AKAP11Q9UKA4 1901 aa22.51■■□□□ 1.19
PKP3-208ENST00000531857 ADM5C9JUS6 153 aa22.51■■□□□ 1.19
PKP3-208ENST00000531857 NOGQ13253 232 aa22.51■■□□□ 1.19
PKP3-208ENST00000531857 WDR43Q15061 677 aaKnown RBP eCLIP22.51■■□□□ 1.19
PKP3-208ENST00000531857 EYA3Q99504 573 aa22.51■■□□□ 1.19
PKP3-208ENST00000531857 MBIPQ9NS73 344 aa22.51■■□□□ 1.19
PKP3-208ENST00000531857 FAM155AB1AL88 458 aaPredicted RBP22.5■■□□□ 1.19
PKP3-208ENST00000531857 RPS12P25398 132 aaKnown RBP22.5■■□□□ 1.19
PKP3-208ENST00000531857 RGS19P49795 217 aa22.5■■□□□ 1.19
PKP3-208ENST00000531857 SEC31BQ9NQW1 1179 aa22.5■■□□□ 1.19
PKP3-208ENST00000531857 MLLT1Q03111 559 aaPredicted RBP22.49■■□□□ 1.19
PKP3-208ENST00000531857 RGMBQ6NW40 437 aa22.49■■□□□ 1.19
PKP3-208ENST00000531857 PHAXQ9H814 394 aaKnown RBP22.49■■□□□ 1.19
PKP3-208ENST00000531857 SPEF2Q9C093 1822 aa22.48■■□□□ 1.19
PKP3-208ENST00000531857 RIC3Q7Z5B4 369 aa22.48■■□□□ 1.19
PKP3-208ENST00000531857 ZBTB38Q8NAP3 1195 aaPredicted RBP22.48■■□□□ 1.19
PKP3-208ENST00000531857 DCPSQ96C86 337 aaKnown RBP22.48■■□□□ 1.19
PKP3-208ENST00000531857 GBA2Q9HCG7 927 aaPredicted RBP22.48■■□□□ 1.19
PKP3-208ENST00000531857 ASTN2O75129 1339 aaPredicted RBP22.48■■□□□ 1.19
PKP3-208ENST00000531857 VIL1P09327 827 aaKnown RBP22.47■■□□□ 1.19
PKP3-208ENST00000531857 ZNF853P0CG23 659 aa22.47■■□□□ 1.19
PKP3-208ENST00000531857 DGKZQ13574 1117 aa22.47■■□□□ 1.19
PKP3-208ENST00000531857 KIF4BQ2VIQ3 1234 aa22.47■■□□□ 1.19
PKP3-208ENST00000531857 JARID2Q92833 1246 aaPredicted RBP22.47■■□□□ 1.19
PKP3-208ENST00000531857 ZC3H12CQ9C0D7 883 aaKnown RBP22.47■■□□□ 1.19
PKP3-208ENST00000531857 PODXL2Q9NZ53 605 aa22.47■■□□□ 1.19
PKP3-208ENST00000531857 UFL1O94874 794 aa22.46■■□□□ 1.19
PKP3-208ENST00000531857 C2orf69Q8N8R5 385 aa22.46■■□□□ 1.19
PKP3-208ENST00000531857 ELL2O00472 640 aaPredicted RBP22.45■■□□□ 1.18
PKP3-208ENST00000531857 GOLGA2Q08379 1002 aa22.45■■□□□ 1.18
PKP3-208ENST00000531857 MYD88Q99836 296 aa22.45■■□□□ 1.18
PKP3-208ENST00000531857 GGA3Q9NZ52 723 aa22.45■■□□□ 1.18
PKP3-208ENST00000531857 ANKIB1Q9P2G1 1089 aa22.45■■□□□ 1.18
PKP3-208ENST00000531857 MYH3P11055 1940 aa22.45■■□□□ 1.18
PKP3-208ENST00000531857 ZNF157P51786 506 aaPredicted RBP22.44■■□□□ 1.18
PKP3-208ENST00000531857 KIF23Q02241 960 aaPredicted RBP22.44■■□□□ 1.18
PKP3-208ENST00000531857 CCDC85AQ96PX6 553 aaPredicted RBP22.44■■□□□ 1.18
PKP3-208ENST00000531857 CCDC102AQ96A19 550 aa22.43■■□□□ 1.18
PKP3-208ENST00000531857 GGA1Q9UJY5 639 aa22.43■■□□□ 1.18
PKP3-208ENST00000531857 ZNF646O15015 1829 aaPredicted RBP22.43■■□□□ 1.18
PKP3-208ENST00000531857 TNRC18O15417 2968 aaPredicted RBP22.42■■□□□ 1.18
PKP3-208ENST00000531857 G3V3G9 751 aa22.42■■□□□ 1.18
PKP3-208ENST00000531857 PCCAP05165 728 aaPredicted RBP22.42■■□□□ 1.18
PKP3-208ENST00000531857 DCAF8Q5TAQ9 597 aa22.42■■□□□ 1.18
PKP3-208ENST00000531857 SULF1Q8IWU6 871 aa22.42■■□□□ 1.18
PKP3-208ENST00000531857 CDCA5Q96FF9 252 aa22.42■■□□□ 1.18
PKP3-208ENST00000531857 PDE8AO60658 829 aa22.41■■□□□ 1.18
PKP3-208ENST00000531857 ZNF280AP59817 542 aaPredicted RBP22.41■■□□□ 1.18
PKP3-208ENST00000531857 CCDC152Q4G0S7 254 aa22.41■■□□□ 1.18
PKP3-208ENST00000531857 CCDC191Q8NCU4 936 aa22.41■■□□□ 1.18
PKP3-208ENST00000531857 ZNF609O15014 1411 aa22.4■■□□□ 1.18
PKP3-208ENST00000531857 APAF1O14727 1248 aa22.4■■□□□ 1.18
PKP3-208ENST00000531857 SLC34A2O95436 690 aa22.4■■□□□ 1.18
PKP3-208ENST00000531857 SCARF1Q14162 830 aa22.4■■□□□ 1.18
PKP3-208ENST00000531857 ANGEL2Q5VTE6 544 aaKnown RBP22.4■■□□□ 1.18
PKP3-208ENST00000531857 RSBN1LQ6PCB5 846 aaPredicted RBP22.4■■□□□ 1.18
PKP3-208ENST00000531857 C8orf58Q8NAV2 365 aa22.4■■□□□ 1.18
PKP3-208ENST00000531857 IFT57Q9NWB7 429 aa22.4■■□□□ 1.18
PKP3-208ENST00000531857 RNF186Q9NXI6 227 aa22.4■■□□□ 1.18
PKP3-208ENST00000531857 SAGE1Q9NXZ1 904 aa22.4■■□□□ 1.18
PKP3-208ENST00000531857 WTIPA6NIX2 430 aaPredicted RBP22.39■■□□□ 1.17
PKP3-208ENST00000531857 TRPA1O75762 1119 aa22.39■■□□□ 1.17
PKP3-208ENST00000531857 SLC10A3P09131 477 aa22.39■■□□□ 1.17
PKP3-208ENST00000531857 HSP90B1P14625 803 aaKnown RBP22.39■■□□□ 1.17
PKP3-208ENST00000531857 AGBL3Q8NEM8 1001 aa22.39■■□□□ 1.17
PKP3-208ENST00000531857 CWC25Q9NXE8 425 aaPredicted RBP22.39■■□□□ 1.17
PKP3-208ENST00000531857 GNAI1P63096 354 aa22.38■■□□□ 1.17
PKP3-208ENST00000531857 CSRNP1Q96S65 589 aa22.38■■□□□ 1.17
PKP3-208ENST00000531857 GMLQ99445 158 aa22.38■■□□□ 1.17
PKP3-208ENST00000531857 METTL22Q9BUU2 404 aaPredicted RBP22.38■■□□□ 1.17
PKP3-208ENST00000531857 XDHP47989 1333 aa22.37■■□□□ 1.17
PKP3-208ENST00000531857 ANKRD18AQ8IVF6 992 aa22.37■■□□□ 1.17
PKP3-208ENST00000531857 SCAF8Q9UPN6 1271 aaKnown RBP22.37■■□□□ 1.17
PKP3-208ENST00000531857 PAPPA2Q9BXP8 1791 aa22.37■■□□□ 1.17
PKP3-208ENST00000531857 MYOZ2Q9NPC6 264 aa22.36■■□□□ 1.17
PKP3-208ENST00000531857 USP17L8P0C7I0 530 aa22.35■■□□□ 1.17
PKP3-208ENST00000531857 RASAL3Q86YV0 1011 aa22.35■■□□□ 1.17
PKP3-208ENST00000531857 PRKRIP1Q9H875 184 aaPredicted RBP22.35■■□□□ 1.17
PKP3-208ENST00000531857 MAP3K2Q9Y2U5 619 aa22.35■■□□□ 1.17
PKP3-208ENST00000531857 USP17L3A6NCW0 530 aa22.34■■□□□ 1.17
PKP3-208ENST00000531857 USP17L4A6NCW7 530 aa22.34■■□□□ 1.17
PKP3-208ENST00000531857 ATP2B4P23634 1241 aa22.34■■□□□ 1.17
PKP3-208ENST00000531857 USP17L1Q7RTZ2 530 aa22.34■■□□□ 1.17
PKP3-208ENST00000531857 TSPYL6Q8N831 410 aa22.34■■□□□ 1.17
PKP3-208ENST00000531857 DDX58O95786 925 aaKnown RBP22.33■■□□□ 1.17
PKP3-208ENST00000531857 IGKV5-2P06315 115 aa22.33■■□□□ 1.17
PKP3-208ENST00000531857 CALD1Q05682 793 aaKnown RBP22.33■■□□□ 1.17
PKP3-208ENST00000531857 CCDC30Q5VVM6 783 aa22.33■■□□□ 1.17
PKP3-208ENST00000531857 MOB2Q70IA6 237 aa22.33■■□□□ 1.17
PKP3-208ENST00000531857 PODNQ7Z5L7 613 aa22.33■■□□□ 1.17
PKP3-208ENST00000531857 ZNF316A6NFI3 1004 aaPredicted RBP22.32■■□□□ 1.16
PKP3-208ENST00000531857 CTSWP56202 376 aa22.32■■□□□ 1.16
PKP3-208ENST00000531857 PRAMEF18Q5VWM3 479 aa22.32■■□□□ 1.16
PKP3-208ENST00000531857 TTLL11Q8NHH1 800 aa22.32■■□□□ 1.16
PKP3-208ENST00000531857 MXD3Q9BW11 206 aa22.32■■□□□ 1.16
PKP3-208ENST00000531857 PITPNM2Q9BZ72 1349 aa22.31■■□□□ 1.16
PKP3-208ENST00000531857 PI4KAP2A4QPH2 592 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms