RNA–Protein interactions for RNA: ENST00000531607.5

CHEK1-212, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 462 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-212ENST00000531607 LMOD3Q0VAK6 560 aa13.81□□□□□ -0.2
CHEK1-212ENST00000531607 RBM26Q5T8P6 1007 aaKnown RBP13.81□□□□□ -0.2
CHEK1-212ENST00000531607 BABAM1Q9NWV8 329 aa13.81□□□□□ -0.2
CHEK1-212ENST00000531607 SAGE1Q9NXZ1 904 aa13.81□□□□□ -0.2
CHEK1-212ENST00000531607 RPS12P25398 132 aaKnown RBP13.8□□□□□ -0.2
CHEK1-212ENST00000531607 ZNF157P51786 506 aaPredicted RBP13.8□□□□□ -0.2
CHEK1-212ENST00000531607 SOX10P56693 466 aa13.8□□□□□ -0.2
CHEK1-212ENST00000531607 KIF4BQ2VIQ3 1234 aa13.8□□□□□ -0.2
CHEK1-212ENST00000531607 CELF1Q92879 486 aaKnown RBP13.8□□□□□ -0.2
CHEK1-212ENST00000531607 CCDC102AQ96A19 550 aa13.8□□□□□ -0.2
CHEK1-212ENST00000531607 GGA3Q9NZ52 723 aa13.8□□□□□ -0.2
CHEK1-212ENST00000531607 CHPF2Q9P2E5 772 aa13.8□□□□□ -0.2
CHEK1-212ENST00000531607 RTL9Q8NET4 1388 aa13.8□□□□□ -0.2
CHEK1-212ENST00000531607 LAMB1P07942 1786 aa13.79□□□□□ -0.2
CHEK1-212ENST00000531607 GPSM2P81274 684 aa13.79□□□□□ -0.2
CHEK1-212ENST00000531607 KIF23Q02241 960 aaPredicted RBP13.79□□□□□ -0.2
CHEK1-212ENST00000531607 DOK7Q18PE1 504 aa13.79□□□□□ -0.2
CHEK1-212ENST00000531607 KRT24Q2M2I5 525 aa13.79□□□□□ -0.2
CHEK1-212ENST00000531607 SULF1Q8IWU6 871 aa13.79□□□□□ -0.2
CHEK1-212ENST00000531607 FAM89AQ96GI7 184 aa13.79□□□□□ -0.2
CHEK1-212ENST00000531607 EYA3Q99504 573 aa13.79□□□□□ -0.2
CHEK1-212ENST00000531607 TRPA1O75762 1119 aa13.78□□□□□ -0.2
CHEK1-212ENST00000531607 TMPOP42166 694 aaKnown RBP13.78□□□□□ -0.2
CHEK1-212ENST00000531607 RTL5Q5HYW3 569 aaPredicted RBP13.78□□□□□ -0.2
CHEK1-212ENST00000531607 PLBD2Q8NHP8 589 aa13.78□□□□□ -0.2
CHEK1-212ENST00000531607 KCNQ5Q9NR82 932 aa13.78□□□□□ -0.2
CHEK1-212ENST00000531607 POLLQ9UGP5 575 aa13.78□□□□□ -0.2
CHEK1-212ENST00000531607 A0A1B0GUL6 1792 aa13.77□□□□□ -0.21
CHEK1-212ENST00000531607 ATP5J2-PTCD1G3V325 749 aa13.77□□□□□ -0.21
CHEK1-212ENST00000531607 G3V3G9 751 aa13.77□□□□□ -0.21
CHEK1-212ENST00000531607 SLC10A3P09131 477 aa13.77□□□□□ -0.21
CHEK1-212ENST00000531607 SF3B3Q15393 1217 aaKnown RBP13.77□□□□□ -0.21
CHEK1-212ENST00000531607 DCAF8Q5TAQ9 597 aa13.77□□□□□ -0.21
CHEK1-212ENST00000531607 HDGFL1Q5TGJ6 251 aa13.77□□□□□ -0.21
CHEK1-212ENST00000531607 TBC1D16Q8TBP0 767 aa13.77□□□□□ -0.21
CHEK1-212ENST00000531607 CDCA5Q96FF9 252 aa13.77□□□□□ -0.21
CHEK1-212ENST00000531607 RNF186Q9NXI6 227 aa13.77□□□□□ -0.21
CHEK1-212ENST00000531607 PCDH10Q9P2E7 1040 aa13.77□□□□□ -0.21
CHEK1-212ENST00000531607 LAS1LQ9Y4W2 734 aaKnown RBP13.77□□□□□ -0.21
CHEK1-212ENST00000531607 CENPFP49454 3210 aa13.76□□□□□ -0.21
CHEK1-212ENST00000531607 ZNF609O15014 1411 aa13.76□□□□□ -0.21
CHEK1-212ENST00000531607 ASTN2O75129 1339 aaPredicted RBP13.76□□□□□ -0.21
CHEK1-212ENST00000531607 NEUROD2Q15784 382 aa13.76□□□□□ -0.21
CHEK1-212ENST00000531607 ANKRD13DQ6ZTN6 518 aa13.76□□□□□ -0.21
CHEK1-212ENST00000531607 ISCA1Q9BUE6 129 aa13.76□□□□□ -0.21
CHEK1-212ENST00000531607 ZC3H12CQ9C0D7 883 aaKnown RBP13.76□□□□□ -0.21
CHEK1-212ENST00000531607 IRS4O14654 1257 aaPredicted RBP13.75□□□□□ -0.21
CHEK1-212ENST00000531607 UFL1O94874 794 aa13.75□□□□□ -0.21
CHEK1-212ENST00000531607 DBF4Q9UBU7 674 aaPredicted RBP13.75□□□□□ -0.21
CHEK1-212ENST00000531607 HTTP42858 3142 aa13.75□□□□□ -0.21
CHEK1-212ENST00000531607 RBBP6Q7Z6E9 1792 aaKnown RBP13.75□□□□□ -0.21
CHEK1-212ENST00000531607 RPS8P62241 208 aaKnown RBP13.74□□□□□ -0.21
CHEK1-212ENST00000531607 ANGEL2Q5VTE6 544 aaKnown RBP13.74□□□□□ -0.21
CHEK1-212ENST00000531607 CTU1Q7Z7A3 348 aaKnown RBP13.74□□□□□ -0.21
CHEK1-212ENST00000531607 RASAL3Q86YV0 1011 aa13.74□□□□□ -0.21
CHEK1-212ENST00000531607 CCDC146Q8IYE0 955 aa13.74□□□□□ -0.21
CHEK1-212ENST00000531607 CSRNP1Q96S65 589 aa13.74□□□□□ -0.21
CHEK1-212ENST00000531607 ANKIB1Q9P2G1 1089 aa13.74□□□□□ -0.21
CHEK1-212ENST00000531607 CHL1O00533 1208 aa13.73□□□□□ -0.21
CHEK1-212ENST00000531607 VIL1P09327 827 aaKnown RBP13.73□□□□□ -0.21
CHEK1-212ENST00000531607 GGA1Q9UJY5 639 aa13.73□□□□□ -0.21
CHEK1-212ENST00000531607 HOXB7P09629 217 aa13.72□□□□□ -0.21
CHEK1-212ENST00000531607 REM2Q8IYK8 340 aaPredicted RBP13.72□□□□□ -0.21
CHEK1-212ENST00000531607 HYPKQ9NX55 129 aa13.72□□□□□ -0.21
CHEK1-212ENST00000531607 PODXL2Q9NZ53 605 aa13.72□□□□□ -0.21
CHEK1-212ENST00000531607 CACNA1FO60840 1977 aa13.71□□□□□ -0.21
CHEK1-212ENST00000531607 ZNF280AP59817 542 aaPredicted RBP13.71□□□□□ -0.21
CHEK1-212ENST00000531607 GOLGA2Q08379 1002 aa13.71□□□□□ -0.21
CHEK1-212ENST00000531607 SCARF1Q14162 830 aa13.71□□□□□ -0.21
CHEK1-212ENST00000531607 RSBN1LQ6PCB5 846 aaPredicted RBP13.71□□□□□ -0.21
CHEK1-212ENST00000531607 CHRDL2Q6WN34 429 aa13.71□□□□□ -0.21
CHEK1-212ENST00000531607 AGBL3Q8NEM8 1001 aa13.71□□□□□ -0.21
CHEK1-212ENST00000531607 SEC31BQ9NQW1 1179 aa13.71□□□□□ -0.21
CHEK1-212ENST00000531607 MKI67P46013 3256 aaKnown RBP13.71□□□□□ -0.22
CHEK1-212ENST00000531607 OTOFQ9HC10 1997 aa13.71□□□□□ -0.22
CHEK1-212ENST00000531607 PITPNM2Q9BZ72 1349 aa13.7□□□□□ -0.22
CHEK1-212ENST00000531607 HSP90B1P14625 803 aaKnown RBP13.7□□□□□ -0.22
CHEK1-212ENST00000531607 FKBP1BP68106 108 aa13.7□□□□□ -0.22
CHEK1-212ENST00000531607 PRPF38BQ5VTL8 546 aaKnown RBP13.7□□□□□ -0.22
CHEK1-212ENST00000531607 RIC3Q7Z5B4 369 aa13.7□□□□□ -0.22
CHEK1-212ENST00000531607 ZBTB38Q8NAP3 1195 aaPredicted RBP13.7□□□□□ -0.22
CHEK1-212ENST00000531607 MYOZ2Q9NPC6 264 aa13.7□□□□□ -0.22
CHEK1-212ENST00000531607 TRIM35Q9UPQ4 493 aa13.7□□□□□ -0.22
CHEK1-212ENST00000531607 HPS5Q9UPZ3 1129 aa13.7□□□□□ -0.22
CHEK1-212ENST00000531607 XDHP47989 1333 aa13.69□□□□□ -0.22
CHEK1-212ENST00000531607 USP17L8P0C7I0 530 aa13.69□□□□□ -0.22
CHEK1-212ENST00000531607 TRIM28Q13263 835 aaKnown RBP13.69□□□□□ -0.22
CHEK1-212ENST00000531607 RALBP1Q15311 655 aa13.69□□□□□ -0.22
CHEK1-212ENST00000531607 CCDC152Q4G0S7 254 aa13.69□□□□□ -0.22
CHEK1-212ENST00000531607 DUSP27Q5VZP5 1158 aa13.69□□□□□ -0.22
CHEK1-212ENST00000531607 CCDC85AQ96PX6 553 aaPredicted RBP13.69□□□□□ -0.22
CHEK1-212ENST00000531607 HDAC9Q9UKV0 1011 aa13.69□□□□□ -0.22
CHEK1-212ENST00000531607 SCAF8Q9UPN6 1271 aaKnown RBP13.69□□□□□ -0.22
CHEK1-212ENST00000531607 TTLL12Q14166 644 aaPredicted RBP13.68□□□□□ -0.22
CHEK1-212ENST00000531607 WDR43Q15061 677 aaKnown RBP eCLIP13.68□□□□□ -0.22
CHEK1-212ENST00000531607 MOB2Q70IA6 237 aa13.68□□□□□ -0.22
CHEK1-212ENST00000531607 RUNDC1Q96C34 613 aa13.68□□□□□ -0.22
CHEK1-212ENST00000531607 MYD88Q99836 296 aa13.68□□□□□ -0.22
CHEK1-212ENST00000531607 USP17L3A6NCW0 530 aa13.67□□□□□ -0.22
CHEK1-212ENST00000531607 USP17L4A6NCW7 530 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms