RNA–Protein interactions for RNA: ENST00000531598.6

NPIPA3-202, Transcript of nuclear pore complex interacting protein family member A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NPIPA3, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3-202ENST00000531598 IGHMBP2P38935 993 aaKnown RBP11.61□□□□□ -0.55
NPIPA3-202ENST00000531598 NMIQ13287 307 aaPredicted RBP11.61□□□□□ -0.55
NPIPA3-202ENST00000531598 PUM3Q15397 648 aaKnown RBP11.61□□□□□ -0.55
NPIPA3-202ENST00000531598 ATP2B3Q16720 1220 aa11.61□□□□□ -0.55
NPIPA3-202ENST00000531598 LPIN2Q92539 896 aa11.61□□□□□ -0.55
NPIPA3-202ENST00000531598 BCL11BQ9C0K0 894 aaPredicted RBP11.61□□□□□ -0.55
NPIPA3-202ENST00000531598 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.61□□□□□ -0.55
NPIPA3-202ENST00000531598 TLR7Q9NYK1 1049 aaKnown RBP11.61□□□□□ -0.55
NPIPA3-202ENST00000531598 NARFQ9UHQ1 456 aa11.61□□□□□ -0.55
NPIPA3-202ENST00000531598 UBN2Q6ZU65 1347 aa11.6□□□□□ -0.55
NPIPA3-202ENST00000531598 IGSF3O75054 1194 aa11.6□□□□□ -0.55
NPIPA3-202ENST00000531598 ZPR1O75312 459 aa11.6□□□□□ -0.55
NPIPA3-202ENST00000531598 PDE8BO95263 885 aa11.6□□□□□ -0.55
NPIPA3-202ENST00000531598 HMGB1P09429 215 aaKnown RBP11.6□□□□□ -0.55
NPIPA3-202ENST00000531598 SLC5A1P13866 664 aa11.6□□□□□ -0.55
NPIPA3-202ENST00000531598 HSPA1LP34931 641 aa11.6□□□□□ -0.55
NPIPA3-202ENST00000531598 LRRC24Q50LG9 513 aa11.6□□□□□ -0.55
NPIPA3-202ENST00000531598 SLC27A3Q5K4L6 730 aa11.6□□□□□ -0.55
NPIPA3-202ENST00000531598 SLC10A5Q5PT55 438 aa11.6□□□□□ -0.55
NPIPA3-202ENST00000531598 VPS53Q5VIR6 699 aa11.6□□□□□ -0.55
NPIPA3-202ENST00000531598 TMED8Q6PL24 325 aaPredicted RBP11.6□□□□□ -0.55
NPIPA3-202ENST00000531598 FAM196AQ6ZSG2 479 aa11.6□□□□□ -0.55
NPIPA3-202ENST00000531598 MPHOSPH8Q99549 860 aa11.6□□□□□ -0.55
NPIPA3-202ENST00000531598 ALDH8A1Q9H2A2 487 aaPredicted RBP11.6□□□□□ -0.55
NPIPA3-202ENST00000531598 GREM2Q9H772 168 aa11.6□□□□□ -0.55
NPIPA3-202ENST00000531598 SH2B1Q9NRF2 756 aaPredicted RBP11.6□□□□□ -0.55
NPIPA3-202ENST00000531598 CCNL1Q9UK58 526 aaPredicted RBP11.6□□□□□ -0.55
NPIPA3-202ENST00000531598 RTCBQ9Y3I0 505 aaKnown RBP11.6□□□□□ -0.55
NPIPA3-202ENST00000531598 CYP46A1Q9Y6A2 500 aa11.6□□□□□ -0.55
NPIPA3-202ENST00000531598 KCNQ2O43526 872 aa11.59□□□□□ -0.55
NPIPA3-202ENST00000531598 NTSR2O95665 410 aa11.59□□□□□ -0.55
NPIPA3-202ENST00000531598 CUL4AQ13619 759 aa11.59□□□□□ -0.55
NPIPA3-202ENST00000531598 RAB3GAP1Q15042 981 aa11.59□□□□□ -0.55
NPIPA3-202ENST00000531598 NECTIN1Q15223 517 aa11.59□□□□□ -0.55
NPIPA3-202ENST00000531598 SF3B3Q15393 1217 aaKnown RBP11.59□□□□□ -0.55
NPIPA3-202ENST00000531598 SKOR2Q2VWA4 1001 aaPredicted RBP11.59□□□□□ -0.55
NPIPA3-202ENST00000531598 SUSD4Q5VX71 490 aa11.59□□□□□ -0.55
NPIPA3-202ENST00000531598 USPL1Q5W0Q7 1092 aa11.59□□□□□ -0.55
NPIPA3-202ENST00000531598 CLEC17AQ6ZS10 378 aa11.59□□□□□ -0.55
NPIPA3-202ENST00000531598 LINC00116Q8NCU8 138 aa11.59□□□□□ -0.55
NPIPA3-202ENST00000531598 XAGE2Q96GT9 111 aa11.59□□□□□ -0.55
NPIPA3-202ENST00000531598 DNAJC2Q99543 621 aaKnown RBP11.59□□□□□ -0.55
NPIPA3-202ENST00000531598 DSCC1Q9BVC3 393 aa11.59□□□□□ -0.55
NPIPA3-202ENST00000531598 ZNF219Q9P2Y4 722 aaPredicted RBP11.59□□□□□ -0.55
NPIPA3-202ENST00000531598 CTNNA3Q9UI47 895 aa11.59□□□□□ -0.55
NPIPA3-202ENST00000531598 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.59□□□□□ -0.55
NPIPA3-202ENST00000531598 SNX14Q9Y5W7 946 aa11.59□□□□□ -0.55
NPIPA3-202ENST00000531598 COL5A3P25940 1745 aaPredicted RBP11.59□□□□□ -0.55
NPIPA3-202ENST00000531598 LRP5O75197 1615 aa11.59□□□□□ -0.55
NPIPA3-202ENST00000531598 RNF113AO15541 343 aaKnown RBP11.58□□□□□ -0.56
NPIPA3-202ENST00000531598 SEPT12Q8IYM1 358 aa11.58□□□□□ -0.56
NPIPA3-202ENST00000531598 ZNF594Q96JF6 807 aaPredicted RBP11.58□□□□□ -0.56
NPIPA3-202ENST00000531598 ZSWIM6Q9HCJ5 1215 aa11.58□□□□□ -0.56
NPIPA3-202ENST00000531598 LIMCH1Q9UPQ0 1083 aa11.58□□□□□ -0.56
NPIPA3-202ENST00000531598 RBM8AQ9Y5S9 174 aaKnown RBP11.58□□□□□ -0.56
NPIPA3-202ENST00000531598 AK9Q5TCS8 1911 aa11.58□□□□□ -0.56
NPIPA3-202ENST00000531598 GOLIM4O00461 696 aa11.57□□□□□ -0.56
NPIPA3-202ENST00000531598 TAF5LO75529 589 aa11.57□□□□□ -0.56
NPIPA3-202ENST00000531598 GTF2E1P29083 439 aaPredicted RBP11.57□□□□□ -0.56
NPIPA3-202ENST00000531598 TIMM10P62072 90 aa11.57□□□□□ -0.56
NPIPA3-202ENST00000531598 ZMYM1Q5SVZ6 1142 aa11.57□□□□□ -0.56
NPIPA3-202ENST00000531598 CREB3L3Q68CJ9 461 aa11.57□□□□□ -0.56
NPIPA3-202ENST00000531598 ZNF772Q68DY9 489 aaPredicted RBP11.57□□□□□ -0.56
NPIPA3-202ENST00000531598 TPTE2Q6XPS3 522 aa11.57□□□□□ -0.56
NPIPA3-202ENST00000531598 VGLL2Q8N8G2 317 aa11.57□□□□□ -0.56
NPIPA3-202ENST00000531598 TMX3Q96JJ7 454 aa11.57□□□□□ -0.56
NPIPA3-202ENST00000531598 SETDB2Q96T68 719 aa11.57□□□□□ -0.56
NPIPA3-202ENST00000531598 PUS3Q9BZE2 481 aaKnown RBP11.57□□□□□ -0.56
NPIPA3-202ENST00000531598 RIC1Q4ADV7 1423 aa11.57□□□□□ -0.56
NPIPA3-202ENST00000531598 A0A0D9SFI3 127 aa11.56□□□□□ -0.56
NPIPA3-202ENST00000531598 CD2BP2O95400 341 aaKnown RBP11.56□□□□□ -0.56
NPIPA3-202ENST00000531598 ARID4AP29374 1257 aaPredicted RBP11.56□□□□□ -0.56
NPIPA3-202ENST00000531598 MCM4P33991 863 aa11.56□□□□□ -0.56
NPIPA3-202ENST00000531598 SAMD1Q6SPF0 538 aaPredicted RBP11.56□□□□□ -0.56
NPIPA3-202ENST00000531598 RUFY3Q7L099 469 aa11.56□□□□□ -0.56
NPIPA3-202ENST00000531598 FAM227BQ96M60 508 aa11.56□□□□□ -0.56
NPIPA3-202ENST00000531598 QTRT2Q9H974 415 aaKnown RBP11.56□□□□□ -0.56
NPIPA3-202ENST00000531598 GNL3LQ9NVN8 582 aaKnown RBP11.56□□□□□ -0.56
NPIPA3-202ENST00000531598 PALD1Q9ULE6 856 aa11.56□□□□□ -0.56
NPIPA3-202ENST00000531598 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.56□□□□□ -0.56
NPIPA3-202ENST00000531598 BCORQ6W2J9 1755 aa11.56□□□□□ -0.56
NPIPA3-202ENST00000531598 NUP98P52948 1817 aa11.56□□□□□ -0.56
NPIPA3-202ENST00000531598 LAMB2P55268 1798 aa11.55□□□□□ -0.56
NPIPA3-202ENST00000531598 SLC27A2O14975 620 aa11.55□□□□□ -0.56
NPIPA3-202ENST00000531598 GNPATO15228 680 aa11.55□□□□□ -0.56
NPIPA3-202ENST00000531598 FGFR2P21802 821 aa11.55□□□□□ -0.56
NPIPA3-202ENST00000531598 TRAPPC3LQ5T215 181 aa11.55□□□□□ -0.56
NPIPA3-202ENST00000531598 PRPF40BQ6NWY9 871 aaKnown RBP11.55□□□□□ -0.56
NPIPA3-202ENST00000531598 BLOC1S2Q6QNY1 142 aa11.55□□□□□ -0.56
NPIPA3-202ENST00000531598 DDX46Q7L014 1031 aaKnown RBP11.55□□□□□ -0.56
NPIPA3-202ENST00000531598 ANKRD18AQ8IVF6 992 aa11.55□□□□□ -0.56
NPIPA3-202ENST00000531598 APPBP2Q92624 585 aa11.55□□□□□ -0.56
NPIPA3-202ENST00000531598 TTC14Q96N46 770 aa11.55□□□□□ -0.56
NPIPA3-202ENST00000531598 NLRP3Q96P20 1036 aa11.55□□□□□ -0.56
NPIPA3-202ENST00000531598 PDRG1Q9NUG6 133 aa11.55□□□□□ -0.56
NPIPA3-202ENST00000531598 SCN7AQ01118 1682 aa11.55□□□□□ -0.56
NPIPA3-202ENST00000531598 RPAP1Q9BWH6 1393 aaPredicted RBP11.54□□□□□ -0.56
NPIPA3-202ENST00000531598 FRAT2O75474 233 aaPredicted RBP11.54□□□□□ -0.56
NPIPA3-202ENST00000531598 CASTP20810 708 aaKnown RBP11.54□□□□□ -0.56
NPIPA3-202ENST00000531598 RFC4P35249 363 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms