RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 CTDSPL2Q05D32 466 aa9.58□□□□□ -0.88
TRIM53CP-201ENST00000531490 CYP4X1Q8N118 509 aa9.58□□□□□ -0.88
TRIM53CP-201ENST00000531490 PXDNLA1KZ92 1463 aa9.58□□□□□ -0.88
TRIM53CP-201ENST00000531490 MAP2P11137 1827 aaKnown RBP9.57□□□□□ -0.88
TRIM53CP-201ENST00000531490 FAM187AA6NFU0 413 aa9.57□□□□□ -0.88
TRIM53CP-201ENST00000531490 DGAT1O75907 488 aa9.57□□□□□ -0.88
TRIM53CP-201ENST00000531490 LINC01559Q495D7 138 aa9.57□□□□□ -0.88
TRIM53CP-201ENST00000531490 C9orf131Q5VYM1 1079 aa9.57□□□□□ -0.88
TRIM53CP-201ENST00000531490 TRAF7Q6Q0C0 670 aa9.57□□□□□ -0.88
TRIM53CP-201ENST00000531490 KLRG1Q96E93 195 aa9.57□□□□□ -0.88
TRIM53CP-201ENST00000531490 PCMTD1Q96MG8 357 aaPredicted RBP9.57□□□□□ -0.88
TRIM53CP-201ENST00000531490 RGPD2P0DJD1 1756 aa9.56□□□□□ -0.88
TRIM53CP-201ENST00000531490 KIF20BQ96Q89 1820 aa9.56□□□□□ -0.88
TRIM53CP-201ENST00000531490 RTL1A6NKG5 1358 aa9.56□□□□□ -0.88
TRIM53CP-201ENST00000531490 TNNT2P45379 298 aaPredicted RBP9.56□□□□□ -0.88
TRIM53CP-201ENST00000531490 PKDCCQ504Y2 493 aa9.56□□□□□ -0.88
TRIM53CP-201ENST00000531490 EMILIN1Q9Y6C2 1016 aa9.56□□□□□ -0.88
TRIM53CP-201ENST00000531490 C5P01031 1676 aa9.56□□□□□ -0.88
TRIM53CP-201ENST00000531490 WASHC2AQ641Q2 1341 aa9.56□□□□□ -0.88
TRIM53CP-201ENST00000531490 C4BP0C0L5 1744 aa9.55□□□□□ -0.88
TRIM53CP-201ENST00000531490 TOGARAM1Q9Y4F4 1720 aa9.55□□□□□ -0.88
TRIM53CP-201ENST00000531490 TNS4Q8IZW8 715 aa9.55□□□□□ -0.88
TRIM53CP-201ENST00000531490 ZNF511Q8NB15 262 aa9.55□□□□□ -0.88
TRIM53CP-201ENST00000531490 SLC4A9Q96Q91 983 aa9.55□□□□□ -0.88
TRIM53CP-201ENST00000531490 INSRP06213 1382 aa9.54□□□□□ -0.88
TRIM53CP-201ENST00000531490 TTC24A2A3L6 582 aaPredicted RBP9.54□□□□□ -0.88
TRIM53CP-201ENST00000531490 PPM1GO15355 546 aaPredicted RBP9.54□□□□□ -0.88
TRIM53CP-201ENST00000531490 KCNA3P22001 575 aa9.54□□□□□ -0.88
TRIM53CP-201ENST00000531490 TGFB2P61812 414 aa9.54□□□□□ -0.88
TRIM53CP-201ENST00000531490 JMYQ8N9B5 988 aa9.54□□□□□ -0.88
TRIM53CP-201ENST00000531490 SNIP1Q8TAD8 396 aaKnown RBP9.54□□□□□ -0.88
TRIM53CP-201ENST00000531490 RRAGCQ9HB90 399 aa9.54□□□□□ -0.88
TRIM53CP-201ENST00000531490 ATG3Q9NT62 314 aa9.54□□□□□ -0.88
TRIM53CP-201ENST00000531490 TMOD3Q9NYL9 352 aa9.54□□□□□ -0.88
TRIM53CP-201ENST00000531490 POLKQ9UBT6 870 aa9.54□□□□□ -0.88
TRIM53CP-201ENST00000531490 SMG6Q86US8 1419 aaKnown RBP9.54□□□□□ -0.88
TRIM53CP-201ENST00000531490 RFC5P40937 340 aa9.53□□□□□ -0.88
TRIM53CP-201ENST00000531490 TRAPPC3LQ5T215 181 aa9.53□□□□□ -0.88
TRIM53CP-201ENST00000531490 C16orf71Q8IYS4 520 aaPredicted RBP9.53□□□□□ -0.88
TRIM53CP-201ENST00000531490 LRRN4Q8WUT4 740 aa9.53□□□□□ -0.88
TRIM53CP-201ENST00000531490 FLT4P35916 1363 aa9.53□□□□□ -0.88
TRIM53CP-201ENST00000531490 C10orf71Q711Q0 1435 aa9.52□□□□□ -0.88
TRIM53CP-201ENST00000531490 SIAH2O43255 324 aa9.52□□□□□ -0.88
TRIM53CP-201ENST00000531490 AP1G2O75843 785 aa9.52□□□□□ -0.88
TRIM53CP-201ENST00000531490 GYS1P13807 737 aa9.52□□□□□ -0.88
TRIM53CP-201ENST00000531490 CNGB1Q14028 1251 aaPredicted RBP9.52□□□□□ -0.88
TRIM53CP-201ENST00000531490 EHBP1Q8NDI1 1231 aa9.52□□□□□ -0.88
TRIM53CP-201ENST00000531490 RNF181Q9P0P0 153 aa9.52□□□□□ -0.88
TRIM53CP-201ENST00000531490 RTCBQ9Y3I0 505 aaKnown RBP9.52□□□□□ -0.88
TRIM53CP-201ENST00000531490 KNSTRNQ9Y448 316 aa9.52□□□□□ -0.88
TRIM53CP-201ENST00000531490 KCPQ6ZWJ8 1503 aa9.52□□□□□ -0.89
TRIM53CP-201ENST00000531490 CICQ96RK0 1608 aaPredicted RBP9.52□□□□□ -0.89
TRIM53CP-201ENST00000531490 J3QL48 77 aa9.51□□□□□ -0.89
TRIM53CP-201ENST00000531490 PHKG2P15735 406 aa9.51□□□□□ -0.89
TRIM53CP-201ENST00000531490 HMGB2P26583 209 aaKnown RBP9.51□□□□□ -0.89
TRIM53CP-201ENST00000531490 CHRNA5P30532 468 aa9.51□□□□□ -0.89
TRIM53CP-201ENST00000531490 PRELPP51888 382 aa9.51□□□□□ -0.89
TRIM53CP-201ENST00000531490 FSTL1Q12841 308 aa9.51□□□□□ -0.89
TRIM53CP-201ENST00000531490 NLGN1Q8N2Q7 840 aa9.51□□□□□ -0.89
TRIM53CP-201ENST00000531490 CCDC87Q9NVE4 849 aa9.51□□□□□ -0.89
TRIM53CP-201ENST00000531490 SRP68Q9UHB9 627 aaKnown RBP9.51□□□□□ -0.89
TRIM53CP-201ENST00000531490 SPG7Q9UQ90 795 aa9.51□□□□□ -0.89
TRIM53CP-201ENST00000531490 SMPD1P17405 629 aa9.5□□□□□ -0.89
TRIM53CP-201ENST00000531490 CC2D1BQ5T0F9 858 aaKnown RBP9.5□□□□□ -0.89
TRIM53CP-201ENST00000531490 MORC1Q86VD1 984 aa9.5□□□□□ -0.89
TRIM53CP-201ENST00000531490 PARP3Q9Y6F1 533 aa9.5□□□□□ -0.89
TRIM53CP-201ENST00000531490 RFC4P35249 363 aa9.5□□□□□ -0.89
TRIM53CP-201ENST00000531490 DDR1Q08345 913 aa9.5□□□□□ -0.89
TRIM53CP-201ENST00000531490 DALRD3Q5D0E6 543 aaKnown RBP9.5□□□□□ -0.89
TRIM53CP-201ENST00000531490 FOXJ1Q92949 421 aa9.5□□□□□ -0.89
TRIM53CP-201ENST00000531490 DCAF5Q96JK2 942 aa9.5□□□□□ -0.89
TRIM53CP-201ENST00000531490 UBR3Q6ZT12 1888 aa9.49□□□□□ -0.89
TRIM53CP-201ENST00000531490 HSPA1AP0DMV8 641 aaKnown RBP9.49□□□□□ -0.89
TRIM53CP-201ENST00000531490 HSPA1BP0DMV9 641 aaKnown RBP9.49□□□□□ -0.89
TRIM53CP-201ENST00000531490 RASSF7Q02833 373 aa9.49□□□□□ -0.89
TRIM53CP-201ENST00000531490 IFNL2Q8IZJ0 200 aa9.49□□□□□ -0.89
TRIM53CP-201ENST00000531490 PIM2Q9P1W9 311 aa9.49□□□□□ -0.89
TRIM53CP-201ENST00000531490 ANKRD26Q9UPS8 1709 aa9.49□□□□□ -0.89
TRIM53CP-201ENST00000531490 KDM2BQ8NHM5 1336 aa9.48□□□□□ -0.89
TRIM53CP-201ENST00000531490 TAF1LQ8IZX4 1826 aa9.48□□□□□ -0.89
TRIM53CP-201ENST00000531490 KDRP35968 1356 aa9.48□□□□□ -0.89
TRIM53CP-201ENST00000531490 RPS6KA4O75676 772 aa9.48□□□□□ -0.89
TRIM53CP-201ENST00000531490 AVPP01185 164 aa9.48□□□□□ -0.89
TRIM53CP-201ENST00000531490 USP17L8P0C7I0 530 aa9.48□□□□□ -0.89
TRIM53CP-201ENST00000531490 VARSP26640 1264 aaKnown RBP9.48□□□□□ -0.89
TRIM53CP-201ENST00000531490 ARMC2Q8NEN0 867 aa9.48□□□□□ -0.89
TRIM53CP-201ENST00000531490 PTCD1O75127 700 aaKnown RBP9.47□□□□□ -0.89
TRIM53CP-201ENST00000531490 ALDH1A1P00352 501 aa9.47□□□□□ -0.89
TRIM53CP-201ENST00000531490 EIF4A2Q14240 407 aaKnown RBP9.47□□□□□ -0.89
TRIM53CP-201ENST00000531490 NR6A1Q15406 480 aa9.47□□□□□ -0.89
TRIM53CP-201ENST00000531490 C4orf48Q5BLP8 95 aa9.47□□□□□ -0.89
TRIM53CP-201ENST00000531490 SMC1BQ8NDV3 1235 aa9.47□□□□□ -0.89
TRIM53CP-201ENST00000531490 HMX1Q9NP08 348 aaPredicted RBP9.47□□□□□ -0.89
TRIM53CP-201ENST00000531490 PLEKHG2Q9H7P9 1386 aa9.47□□□□□ -0.89
TRIM53CP-201ENST00000531490 NCAPD2Q15021 1401 aa9.47□□□□□ -0.89
TRIM53CP-201ENST00000531490 KIAA1551Q9HCM1 1747 aa9.47□□□□□ -0.89
TRIM53CP-201ENST00000531490 N4BP2Q86UW6 1770 aaPredicted RBP9.46□□□□□ -0.89
TRIM53CP-201ENST00000531490 MTHFSP49914 203 aa9.46□□□□□ -0.9
TRIM53CP-201ENST00000531490 TMEM259Q4ZIN3 620 aa9.46□□□□□ -0.9
TRIM53CP-201ENST00000531490 KIF24Q5T7B8 1368 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms