RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 CACNA1SQ13698 1873 aa23.52■■□□□ 1.36
SMPD1-205ENST00000531303 METTL24Q5JXM2 366 aa23.51■■□□□ 1.35
SMPD1-205ENST00000531303 CRAMP1Q96RY5 1269 aa23.51■■□□□ 1.35
SMPD1-205ENST00000531303 A0A0G2JLW4 131 aa23.5■■□□□ 1.35
SMPD1-205ENST00000531303 HELBQ8NG08 1087 aaPredicted RBP23.5■■□□□ 1.35
SMPD1-205ENST00000531303 BSDC1Q9NW68 430 aaPredicted RBP23.5■■□□□ 1.35
SMPD1-205ENST00000531303 FBXO3Q9UK99 471 aa23.5■■□□□ 1.35
SMPD1-205ENST00000531303 KIF13BQ9NQT8 1826 aa23.5■■□□□ 1.35
SMPD1-205ENST00000531303 DPEP1P16444 411 aa23.49■■□□□ 1.35
SMPD1-205ENST00000531303 C16orf71Q8IYS4 520 aaPredicted RBP23.49■■□□□ 1.35
SMPD1-205ENST00000531303 CEP126Q9P2H0 1117 aa23.49■■□□□ 1.35
SMPD1-205ENST00000531303 LRP5O75197 1615 aa23.49■■□□□ 1.35
SMPD1-205ENST00000531303 SLC51AQ86UW1 340 aa23.49■■□□□ 1.35
SMPD1-205ENST00000531303 ALDH1B1P30837 517 aa23.48■■□□□ 1.35
SMPD1-205ENST00000531303 STYK1Q6J9G0 422 aa23.48■■□□□ 1.35
SMPD1-205ENST00000531303 MROH5Q6ZUA9 1318 aa23.47■■□□□ 1.35
SMPD1-205ENST00000531303 TAF5LO75529 589 aa23.47■■□□□ 1.35
SMPD1-205ENST00000531303 BBOX1O75936 387 aa23.47■■□□□ 1.35
SMPD1-205ENST00000531303 CHRNDQ07001 517 aa23.47■■□□□ 1.35
SMPD1-205ENST00000531303 MINPP1Q9UNW1 487 aa23.47■■□□□ 1.35
SMPD1-205ENST00000531303 PPEF1O14829 653 aaPredicted RBP23.46■■□□□ 1.35
SMPD1-205ENST00000531303 RGS3P49796 1198 aa23.46■■□□□ 1.35
SMPD1-205ENST00000531303 AACSQ86V21 672 aa23.46■■□□□ 1.35
SMPD1-205ENST00000531303 CLASRPQ8N2M8 674 aaKnown RBP23.46■■□□□ 1.35
SMPD1-205ENST00000531303 WWC3Q9ULE0 1092 aa23.46■■□□□ 1.35
SMPD1-205ENST00000531303 PDE4AP27815 886 aa23.45■■□□□ 1.34
SMPD1-205ENST00000531303 OTUD7AQ8TE49 926 aaPredicted RBP23.45■■□□□ 1.34
SMPD1-205ENST00000531303 CNKSR1Q969H4 720 aa23.45■■□□□ 1.34
SMPD1-205ENST00000531303 ZNF219Q9P2Y4 722 aaPredicted RBP23.45■■□□□ 1.34
SMPD1-205ENST00000531303 CD2APQ9Y5K6 639 aa23.45■■□□□ 1.34
SMPD1-205ENST00000531303 TGFB2P61812 414 aa23.44■■□□□ 1.34
SMPD1-205ENST00000531303 NEUROD6Q96NK8 337 aa23.44■■□□□ 1.34
SMPD1-205ENST00000531303 CCDC8Q9H0W5 538 aaPredicted RBP23.44■■□□□ 1.34
SMPD1-205ENST00000531303 SLX4Q8IY92 1834 aa23.44■■□□□ 1.34
SMPD1-205ENST00000531303 TNNI3KQ59H18 835 aa23.43■■□□□ 1.34
SMPD1-205ENST00000531303 PRPF40BQ6NWY9 871 aaKnown RBP23.43■■□□□ 1.34
SMPD1-205ENST00000531303 EAF2Q96CJ1 260 aaPredicted RBP23.43■■□□□ 1.34
SMPD1-205ENST00000531303 FPGT-TNNI3KV9GXZ4 949 aa23.43■■□□□ 1.34
SMPD1-205ENST00000531303 DLEC1Q9Y238 1755 aa23.43■■□□□ 1.34
SMPD1-205ENST00000531303 SNAP23O00161 211 aa23.43■■□□□ 1.34
SMPD1-205ENST00000531303 PDE8BO95263 885 aa23.43■■□□□ 1.34
SMPD1-205ENST00000531303 IFIT2P09913 472 aaKnown RBP23.43■■□□□ 1.34
SMPD1-205ENST00000531303 KCNA3P22001 575 aa23.43■■□□□ 1.34
SMPD1-205ENST00000531303 TIMM10P62072 90 aa23.43■■□□□ 1.34
SMPD1-205ENST00000531303 VGLL2Q8N8G2 317 aa23.43■■□□□ 1.34
SMPD1-205ENST00000531303 OLFM4Q6UX06 510 aa23.42■■□□□ 1.34
SMPD1-205ENST00000531303 ANKIB1Q9P2G1 1089 aa23.42■■□□□ 1.34
SMPD1-205ENST00000531303 KIAA1551Q9HCM1 1747 aa23.42■■□□□ 1.34
SMPD1-205ENST00000531303 A0A1B0GUL6 1792 aa23.41■■□□□ 1.34
SMPD1-205ENST00000531303 ATP2B3Q16720 1220 aa23.41■■□□□ 1.34
SMPD1-205ENST00000531303 SP8Q8IXZ3 490 aa23.41■■□□□ 1.34
SMPD1-205ENST00000531303 TTLL6Q8N841 843 aa23.41■■□□□ 1.34
SMPD1-205ENST00000531303 ANKRD2Q9GZV1 360 aa23.41■■□□□ 1.34
SMPD1-205ENST00000531303 TLR7Q9NYK1 1049 aaKnown RBP23.41■■□□□ 1.34
SMPD1-205ENST00000531303 AKAP2Q9Y2D5 859 aa23.41■■□□□ 1.34
SMPD1-205ENST00000531303 ATP6V0A2Q9Y487 856 aa23.41■■□□□ 1.34
SMPD1-205ENST00000531303 A0A1B0GUL7 405 aa23.4■■□□□ 1.34
SMPD1-205ENST00000531303 WTIPA6NIX2 430 aaPredicted RBP23.4■■□□□ 1.34
SMPD1-205ENST00000531303 KCNJ4P48050 445 aa23.4■■□□□ 1.34
SMPD1-205ENST00000531303 GPSM2P81274 684 aa23.4■■□□□ 1.34
SMPD1-205ENST00000531303 TMC4Q7Z404 712 aa23.4■■□□□ 1.34
SMPD1-205ENST00000531303 NLGN2Q8NFZ4 835 aa23.4■■□□□ 1.34
SMPD1-205ENST00000531303 TMX4Q9H1E5 349 aaPredicted RBP23.4■■□□□ 1.34
SMPD1-205ENST00000531303 NSFL1CQ9UNZ2 370 aaKnown RBP23.4■■□□□ 1.34
SMPD1-205ENST00000531303 PUM3Q15397 648 aaKnown RBP23.39■■□□□ 1.34
SMPD1-205ENST00000531303 GPR108Q9NPR9 543 aa23.39■■□□□ 1.34
SMPD1-205ENST00000531303 PIM2Q9P1W9 311 aa23.39■■□□□ 1.34
SMPD1-205ENST00000531303 ZNF609O15014 1411 aa23.39■■□□□ 1.33
SMPD1-205ENST00000531303 TSHZ3Q63HK5 1081 aa23.38■■□□□ 1.33
SMPD1-205ENST00000531303 DBNDD2Q9BQY9 259 aa23.38■■□□□ 1.33
SMPD1-205ENST00000531303 FHDC1Q9C0D6 1143 aaPredicted RBP23.38■■□□□ 1.33
SMPD1-205ENST00000531303 ADORA1P30542 326 aa23.37■■□□□ 1.33
SMPD1-205ENST00000531303 PLEKHM2Q8IWE5 1019 aa23.37■■□□□ 1.33
SMPD1-205ENST00000531303 DBNLQ9UJU6 430 aaKnown RBP23.37■■□□□ 1.33
SMPD1-205ENST00000531303 C21orf2O43822 256 aa23.36■■□□□ 1.33
SMPD1-205ENST00000531303 SLC5A1P13866 664 aa23.36■■□□□ 1.33
SMPD1-205ENST00000531303 MX1P20591 662 aa23.36■■□□□ 1.33
SMPD1-205ENST00000531303 XDHP47989 1333 aa23.36■■□□□ 1.33
SMPD1-205ENST00000531303 LPIN2Q92539 896 aa23.36■■□□□ 1.33
SMPD1-205ENST00000531303 XAGE2Q96GT9 111 aa23.36■■□□□ 1.33
SMPD1-205ENST00000531303 FGFR2P21802 821 aa23.36■■□□□ 1.33
SMPD1-205ENST00000531303 GORABQ5T7V8 394 aa23.36■■□□□ 1.33
SMPD1-205ENST00000531303 LRRC37AA6NMS7 1700 aa23.35■■□□□ 1.33
SMPD1-205ENST00000531303 ZNF804BA4D1E1 1349 aa23.35■■□□□ 1.33
SMPD1-205ENST00000531303 DALRD3Q5D0E6 543 aaKnown RBP23.35■■□□□ 1.33
SMPD1-205ENST00000531303 GPR101Q96P66 508 aaPredicted RBP23.35■■□□□ 1.33
SMPD1-205ENST00000531303 UFL1O94874 794 aa23.34■■□□□ 1.33
SMPD1-205ENST00000531303 IFIT1P09914 478 aaKnown RBP23.34■■□□□ 1.33
SMPD1-205ENST00000531303 PDE1AP54750 535 aa23.34■■□□□ 1.33
SMPD1-205ENST00000531303 UBE4AQ14139 1066 aa23.34■■□□□ 1.33
SMPD1-205ENST00000531303 MPNDQ8N594 471 aa23.34■■□□□ 1.33
SMPD1-205ENST00000531303 GGA1Q9UJY5 639 aa23.34■■□□□ 1.33
SMPD1-205ENST00000531303 BRCA1P38398 1863 aaKnown RBP23.34■■□□□ 1.33
SMPD1-205ENST00000531303 SALL3Q9BXA9 1300 aa23.33■■□□□ 1.33
SMPD1-205ENST00000531303 C6orf229H3BNL8 230 aa23.33■■□□□ 1.33
SMPD1-205ENST00000531303 C7orf43Q8WVR3 580 aa23.33■■□□□ 1.33
SMPD1-205ENST00000531303 GPATCH3Q96I76 525 aa23.33■■□□□ 1.33
SMPD1-205ENST00000531303 BCS1LQ9Y276 419 aa23.33■■□□□ 1.33
SMPD1-205ENST00000531303 ATP2B4P23634 1241 aa23.32■■□□□ 1.32
SMPD1-205ENST00000531303 KLRK1P26718 216 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms