RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 HOXB7P09629 217 aa17.31■□□□□ 0.36
HIF3A-214ENST00000531043 PHAXQ9H814 394 aaKnown RBP17.31■□□□□ 0.36
HIF3A-214ENST00000531043 RPS8P62241 208 aaKnown RBP17.3■□□□□ 0.36
HIF3A-214ENST00000531043 TRIM28Q13263 835 aaKnown RBP17.3■□□□□ 0.36
HIF3A-214ENST00000531043 CFAP44Q96MT7 982 aa17.3■□□□□ 0.36
HIF3A-214ENST00000531043 HYPKQ9NX55 129 aa17.3■□□□□ 0.36
HIF3A-214ENST00000531043 FAM155AB1AL88 458 aaPredicted RBP17.29■□□□□ 0.36
HIF3A-214ENST00000531043 CCDC85AQ96PX6 553 aaPredicted RBP17.29■□□□□ 0.36
HIF3A-214ENST00000531043 ELL2O00472 640 aaPredicted RBP17.28■□□□□ 0.36
HIF3A-214ENST00000531043 CA12O43570 354 aa17.28■□□□□ 0.36
HIF3A-214ENST00000531043 ZNF853P0CG23 659 aa17.28■□□□□ 0.36
HIF3A-214ENST00000531043 RGS19P49795 217 aa17.28■□□□□ 0.36
HIF3A-214ENST00000531043 WDR43Q15061 677 aaKnown RBP eCLIP17.28■□□□□ 0.36
HIF3A-214ENST00000531043 GBA2Q9HCG7 927 aaPredicted RBP17.28■□□□□ 0.36
HIF3A-214ENST00000531043 WTIPA6NIX2 430 aaPredicted RBP17.27■□□□□ 0.36
HIF3A-214ENST00000531043 UFL1O94874 794 aa17.27■□□□□ 0.36
HIF3A-214ENST00000531043 VIL1P09327 827 aaKnown RBP17.27■□□□□ 0.36
HIF3A-214ENST00000531043 NOGQ13253 232 aa17.27■□□□□ 0.36
HIF3A-214ENST00000531043 KIF4BQ2VIQ3 1234 aa17.27■□□□□ 0.36
HIF3A-214ENST00000531043 RGMBQ6NW40 437 aa17.27■□□□□ 0.36
HIF3A-214ENST00000531043 RIC3Q7Z5B4 369 aa17.27■□□□□ 0.36
HIF3A-214ENST00000531043 ZBTB38Q8NAP3 1195 aaPredicted RBP17.27■□□□□ 0.36
HIF3A-214ENST00000531043 MYD88Q99836 296 aa17.27■□□□□ 0.36
HIF3A-214ENST00000531043 PDE4DIPQ5VU43 2346 aa17.27■□□□□ 0.35
HIF3A-214ENST00000531043 RPS12P25398 132 aaKnown RBP17.26■□□□□ 0.35
HIF3A-214ENST00000531043 DGKZQ13574 1117 aa17.26■□□□□ 0.35
HIF3A-214ENST00000531043 EYA3Q99504 573 aa17.26■□□□□ 0.35
HIF3A-214ENST00000531043 GGA3Q9NZ52 723 aa17.26■□□□□ 0.35
HIF3A-214ENST00000531043 PODXL2Q9NZ53 605 aa17.26■□□□□ 0.35
HIF3A-214ENST00000531043 PSME4Q14997 1843 aa17.26■□□□□ 0.35
HIF3A-214ENST00000531043 AKAP11Q9UKA4 1901 aa17.25■□□□□ 0.35
HIF3A-214ENST00000531043 KIF23Q02241 960 aaPredicted RBP17.25■□□□□ 0.35
HIF3A-214ENST00000531043 MLLT1Q03111 559 aaPredicted RBP17.25■□□□□ 0.35
HIF3A-214ENST00000531043 C8orf58Q8NAV2 365 aa17.25■□□□□ 0.35
HIF3A-214ENST00000531043 DCPSQ96C86 337 aaKnown RBP17.25■□□□□ 0.35
HIF3A-214ENST00000531043 ZC3H12CQ9C0D7 883 aaKnown RBP17.25■□□□□ 0.35
HIF3A-214ENST00000531043 SCAF8Q9UPN6 1271 aaKnown RBP17.25■□□□□ 0.35
HIF3A-214ENST00000531043 APAF1O14727 1248 aa17.24■□□□□ 0.35
HIF3A-214ENST00000531043 GOLGA2Q08379 1002 aa17.24■□□□□ 0.35
HIF3A-214ENST00000531043 C2orf69Q8N8R5 385 aa17.24■□□□□ 0.35
HIF3A-214ENST00000531043 ANKIB1Q9P2G1 1089 aa17.24■□□□□ 0.35
HIF3A-214ENST00000531043 GGA1Q9UJY5 639 aa17.24■□□□□ 0.35
HIF3A-214ENST00000531043 TNRC18O15417 2968 aaPredicted RBP17.23■□□□□ 0.35
HIF3A-214ENST00000531043 PCCAP05165 728 aaPredicted RBP17.23■□□□□ 0.35
HIF3A-214ENST00000531043 ZNF157P51786 506 aaPredicted RBP17.23■□□□□ 0.35
HIF3A-214ENST00000531043 ZNF280AP59817 542 aaPredicted RBP17.23■□□□□ 0.35
HIF3A-214ENST00000531043 CDCA5Q96FF9 252 aa17.23■□□□□ 0.35
HIF3A-214ENST00000531043 SPEF2Q9C093 1822 aa17.22■□□□□ 0.35
HIF3A-214ENST00000531043 SCARF1Q14162 830 aa17.22■□□□□ 0.35
HIF3A-214ENST00000531043 RSBN1LQ6PCB5 846 aaPredicted RBP17.22■□□□□ 0.35
HIF3A-214ENST00000531043 TSPYL6Q8N831 410 aa17.22■□□□□ 0.35
HIF3A-214ENST00000531043 GMLQ99445 158 aa17.22■□□□□ 0.35
HIF3A-214ENST00000531043 IFT57Q9NWB7 429 aa17.22■□□□□ 0.35
HIF3A-214ENST00000531043 PDE8AO60658 829 aa17.21■□□□□ 0.35
HIF3A-214ENST00000531043 TRPA1O75762 1119 aa17.21■□□□□ 0.35
HIF3A-214ENST00000531043 SLC34A2O95436 690 aa17.21■□□□□ 0.35
HIF3A-214ENST00000531043 SLC10A3P09131 477 aa17.21■□□□□ 0.35
HIF3A-214ENST00000531043 CCDC152Q4G0S7 254 aa17.21■□□□□ 0.35
HIF3A-214ENST00000531043 ANGEL2Q5VTE6 544 aaKnown RBP17.21■□□□□ 0.35
HIF3A-214ENST00000531043 MOB2Q70IA6 237 aa17.21■□□□□ 0.35
HIF3A-214ENST00000531043 SULF1Q8IWU6 871 aa17.21■□□□□ 0.35
HIF3A-214ENST00000531043 CCDC191Q8NCU4 936 aa17.21■□□□□ 0.35
HIF3A-214ENST00000531043 CCDC102AQ96A19 550 aa17.21■□□□□ 0.35
HIF3A-214ENST00000531043 CSRNP1Q96S65 589 aa17.21■□□□□ 0.35
HIF3A-214ENST00000531043 CWC25Q9NXE8 425 aaPredicted RBP17.21■□□□□ 0.35
HIF3A-214ENST00000531043 RNF186Q9NXI6 227 aa17.21■□□□□ 0.35
HIF3A-214ENST00000531043 G3V3G9 751 aa17.2■□□□□ 0.34
HIF3A-214ENST00000531043 DCAF8Q5TAQ9 597 aa17.2■□□□□ 0.34
HIF3A-214ENST00000531043 METTL22Q9BUU2 404 aaPredicted RBP17.2■□□□□ 0.34
HIF3A-214ENST00000531043 MXD3Q9BW11 206 aa17.2■□□□□ 0.34
HIF3A-214ENST00000531043 ZNF646O15015 1829 aaPredicted RBP17.19■□□□□ 0.34
HIF3A-214ENST00000531043 IGKV5-2P06315 115 aa17.19■□□□□ 0.34
HIF3A-214ENST00000531043 PRAMEF18Q5VWM3 479 aa17.19■□□□□ 0.34
HIF3A-214ENST00000531043 RASAL3Q86YV0 1011 aa17.19■□□□□ 0.34
HIF3A-214ENST00000531043 ANKRD18AQ8IVF6 992 aa17.19■□□□□ 0.34
HIF3A-214ENST00000531043 AGBL3Q8NEM8 1001 aa17.19■□□□□ 0.34
HIF3A-214ENST00000531043 ZNF609O15014 1411 aa17.19■□□□□ 0.34
HIF3A-214ENST00000531043 MYH3P11055 1940 aa17.19■□□□□ 0.34
HIF3A-214ENST00000531043 GNAI1P63096 354 aa17.18■□□□□ 0.34
HIF3A-214ENST00000531043 PRKRIP1Q9H875 184 aaPredicted RBP17.18■□□□□ 0.34
HIF3A-214ENST00000531043 SAGE1Q9NXZ1 904 aa17.18■□□□□ 0.34
HIF3A-214ENST00000531043 MAP3K2Q9Y2U5 619 aa17.18■□□□□ 0.34
HIF3A-214ENST00000531043 XDHP47989 1333 aa17.18■□□□□ 0.34
HIF3A-214ENST00000531043 CTSWP56202 376 aa17.17■□□□□ 0.34
HIF3A-214ENST00000531043 GREM2Q9H772 168 aa17.17■□□□□ 0.34
HIF3A-214ENST00000531043 MYOZ2Q9NPC6 264 aa17.17■□□□□ 0.34
HIF3A-214ENST00000531043 PAPPA2Q9BXP8 1791 aa17.16■□□□□ 0.34
HIF3A-214ENST00000531043 PI4KAP2A4QPH2 592 aa17.16■□□□□ 0.34
HIF3A-214ENST00000531043 USP17L3A6NCW0 530 aa17.16■□□□□ 0.34
HIF3A-214ENST00000531043 USP17L4A6NCW7 530 aa17.16■□□□□ 0.34
HIF3A-214ENST00000531043 USP17L8P0C7I0 530 aa17.16■□□□□ 0.34
HIF3A-214ENST00000531043 ATP2B4P23634 1241 aa17.16■□□□□ 0.34
HIF3A-214ENST00000531043 USP17L1Q7RTZ2 530 aa17.16■□□□□ 0.34
HIF3A-214ENST00000531043 TXNRD3Q86VQ6 643 aa17.16■□□□□ 0.34
HIF3A-214ENST00000531043 PI4KAP1Q8N8J0 262 aa17.16■□□□□ 0.34
HIF3A-214ENST00000531043 MINPP1Q9UNW1 487 aa17.16■□□□□ 0.34
HIF3A-214ENST00000531043 UBE2Q2LH0YL09 131 aa17.15■□□□□ 0.34
HIF3A-214ENST00000531043 HSP90B1P14625 803 aaKnown RBP17.15■□□□□ 0.34
HIF3A-214ENST00000531043 SOX10P56693 466 aa17.15■□□□□ 0.34
HIF3A-214ENST00000531043 CWF19L2Q2TBE0 894 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms