RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 DNAI1Q9UI46 699 aa13.69□□□□□ -0.22
TRIM3-210ENST00000530724 TMEM2Q9UHN6 1383 aa13.69□□□□□ -0.22
TRIM3-210ENST00000530724 A0A0U1RQG5 324 aaPredicted RBP13.68□□□□□ -0.22
TRIM3-210ENST00000530724 GOLGA6L9A6NEM1 432 aa13.68□□□□□ -0.22
TRIM3-210ENST00000530724 BECN2A8MW95 431 aa13.68□□□□□ -0.22
TRIM3-210ENST00000530724 KINO60870 393 aaKnown RBP13.68□□□□□ -0.22
TRIM3-210ENST00000530724 NBPF7P0C2Y1 421 aaPredicted RBP13.68□□□□□ -0.22
TRIM3-210ENST00000530724 KCNJ4P48050 445 aa13.68□□□□□ -0.22
TRIM3-210ENST00000530724 CLCN6P51797 869 aa13.68□□□□□ -0.22
TRIM3-210ENST00000530724 JAKMIP3Q5VZ66 844 aa13.68□□□□□ -0.22
TRIM3-210ENST00000530724 ELOA2Q8IYF1 753 aaPredicted RBP13.68□□□□□ -0.22
TRIM3-210ENST00000530724 FMR1NBQ8N0W7 255 aaPredicted RBP13.68□□□□□ -0.22
TRIM3-210ENST00000530724 BRF1Q92994 677 aa13.68□□□□□ -0.22
TRIM3-210ENST00000530724 MPHOSPH8Q99549 860 aa13.68□□□□□ -0.22
TRIM3-210ENST00000530724 RTEL1Q9NZ71 1219 aa13.68□□□□□ -0.22
TRIM3-210ENST00000530724 PHRF1Q9P1Y6 1649 aaKnown RBP13.68□□□□□ -0.22
TRIM3-210ENST00000530724 DIP2BQ9P265 1576 aa13.67□□□□□ -0.22
TRIM3-210ENST00000530724 FAM237AA0A1B0GTK4 181 aa13.67□□□□□ -0.22
TRIM3-210ENST00000530724 RPS6KA5O75582 802 aa13.67□□□□□ -0.22
TRIM3-210ENST00000530724 LRRFIP1Q32MZ4 808 aaKnown RBP13.67□□□□□ -0.22
TRIM3-210ENST00000530724 ADALQ6DHV7 355 aa13.67□□□□□ -0.22
TRIM3-210ENST00000530724 BCL11BQ9C0K0 894 aaPredicted RBP13.67□□□□□ -0.22
TRIM3-210ENST00000530724 EFCC1Q9HA90 598 aa13.67□□□□□ -0.22
TRIM3-210ENST00000530724 PIK3C2AO00443 1686 aa13.66□□□□□ -0.22
TRIM3-210ENST00000530724 YEATS4O95619 227 aa13.66□□□□□ -0.22
TRIM3-210ENST00000530724 MAP4K4O95819 1239 aaPredicted RBP13.66□□□□□ -0.22
TRIM3-210ENST00000530724 ATP5JP18859 108 aa13.66□□□□□ -0.22
TRIM3-210ENST00000530724 CTR9Q6PD62 1173 aa13.66□□□□□ -0.22
TRIM3-210ENST00000530724 FERMT3Q86UX7 667 aa13.66□□□□□ -0.22
TRIM3-210ENST00000530724 CCAR1Q8IX12 1150 aaKnown RBP13.66□□□□□ -0.22
TRIM3-210ENST00000530724 NEK1Q96PY6 1258 aa13.66□□□□□ -0.22
TRIM3-210ENST00000530724 TFIP11Q9UBB9 837 aaKnown RBP13.66□□□□□ -0.22
TRIM3-210ENST00000530724 USP16Q9Y5T5 823 aa13.66□□□□□ -0.22
TRIM3-210ENST00000530724 LMO7Q8WWI1 1683 aa13.66□□□□□ -0.22
TRIM3-210ENST00000530724 NEDD4P46934 1319 aa13.65□□□□□ -0.22
TRIM3-210ENST00000530724 MAP3K15Q6ZN16 1313 aa13.65□□□□□ -0.22
TRIM3-210ENST00000530724 NCKAP5LQ9HCH0 1330 aa13.65□□□□□ -0.22
TRIM3-210ENST00000530724 CAPN2P17655 700 aa13.65□□□□□ -0.22
TRIM3-210ENST00000530724 SFPQP23246 707 aaKnown RBP eCLIP13.65□□□□□ -0.22
TRIM3-210ENST00000530724 GPS2Q13227 327 aa13.65□□□□□ -0.22
TRIM3-210ENST00000530724 TUBB2AQ13885 445 aa13.65□□□□□ -0.22
TRIM3-210ENST00000530724 FAM173BQ6P4H8 233 aa13.65□□□□□ -0.22
TRIM3-210ENST00000530724 TRIM65Q6PJ69 517 aa13.65□□□□□ -0.22
TRIM3-210ENST00000530724 TMCO3Q6UWJ1 677 aa13.65□□□□□ -0.22
TRIM3-210ENST00000530724 GPR161Q8N6U8 529 aaKnown RBP13.65□□□□□ -0.22
TRIM3-210ENST00000530724 LINS1Q8NG48 757 aa13.65□□□□□ -0.22
TRIM3-210ENST00000530724 MRPS27Q92552 414 aaKnown RBP13.65□□□□□ -0.22
TRIM3-210ENST00000530724 EXOC4Q96A65 974 aa13.65□□□□□ -0.22
TRIM3-210ENST00000530724 ZNF274Q96GC6 653 aaPredicted RBP13.65□□□□□ -0.22
TRIM3-210ENST00000530724 TUBB2BQ9BVA1 445 aa13.65□□□□□ -0.22
TRIM3-210ENST00000530724 GOLPH3LQ9H4A5 285 aa13.65□□□□□ -0.22
TRIM3-210ENST00000530724 DBF4Q9UBU7 674 aaPredicted RBP13.65□□□□□ -0.22
TRIM3-210ENST00000530724 PLEKHG2Q9H7P9 1386 aa13.65□□□□□ -0.22
TRIM3-210ENST00000530724 A0A0D9SFI3 127 aa13.64□□□□□ -0.23
TRIM3-210ENST00000530724 CBFA2T2O43439 604 aa13.64□□□□□ -0.23
TRIM3-210ENST00000530724 SASH1O94885 1247 aa13.64□□□□□ -0.23
TRIM3-210ENST00000530724 EXOSC10Q01780 885 aaKnown RBP13.64□□□□□ -0.23
TRIM3-210ENST00000530724 ARID5BQ14865 1188 aa13.64□□□□□ -0.23
TRIM3-210ENST00000530724 ARMCX5Q6P1M9 558 aa13.64□□□□□ -0.23
TRIM3-210ENST00000530724 KSR2Q6VAB6 950 aa13.64□□□□□ -0.23
TRIM3-210ENST00000530724 NSUN7Q8NE18 718 aaKnown RBP13.64□□□□□ -0.23
TRIM3-210ENST00000530724 KCNG4Q8TDN1 519 aa13.64□□□□□ -0.23
TRIM3-210ENST00000530724 FAM227BQ96M60 508 aa13.64□□□□□ -0.23
TRIM3-210ENST00000530724 LARP6Q9BRS8 491 aaKnown RBP13.64□□□□□ -0.23
TRIM3-210ENST00000530724 PHAXQ9H814 394 aaKnown RBP13.64□□□□□ -0.23
TRIM3-210ENST00000530724 KIAA1468Q9P260 1216 aa13.64□□□□□ -0.23
TRIM3-210ENST00000530724 SH3TC1Q8TE82 1336 aa13.64□□□□□ -0.23
TRIM3-210ENST00000530724 ZBTB7CA1YPR0 619 aa13.63□□□□□ -0.23
TRIM3-210ENST00000530724 PI4KAP2A4QPH2 592 aa13.63□□□□□ -0.23
TRIM3-210ENST00000530724 H3BQV1 296 aa13.63□□□□□ -0.23
TRIM3-210ENST00000530724 IGSF3O75054 1194 aa13.63□□□□□ -0.23
TRIM3-210ENST00000530724 CDK11BP21127 795 aaKnown RBP13.63□□□□□ -0.23
TRIM3-210ENST00000530724 HOXC9P31274 260 aa13.63□□□□□ -0.23
TRIM3-210ENST00000530724 HNRNPH2P55795 449 aaKnown RBP13.63□□□□□ -0.23
TRIM3-210ENST00000530724 NLRP12P59046 1061 aa13.63□□□□□ -0.23
TRIM3-210ENST00000530724 NCAPHQ15003 741 aa13.63□□□□□ -0.23
TRIM3-210ENST00000530724 ERCC6LQ2NKX8 1250 aa13.63□□□□□ -0.23
TRIM3-210ENST00000530724 IFFO2Q5TF58 517 aa13.63□□□□□ -0.23
TRIM3-210ENST00000530724 AACSQ86V21 672 aa13.63□□□□□ -0.23
TRIM3-210ENST00000530724 PI4KAP1Q8N8J0 262 aa13.63□□□□□ -0.23
TRIM3-210ENST00000530724 HNRNPLLQ8WVV9 542 aaKnown RBP13.63□□□□□ -0.23
TRIM3-210ENST00000530724 POLR3EQ9NVU0 708 aa13.63□□□□□ -0.23
TRIM3-210ENST00000530724 FEZ2Q9UHY8 353 aaPredicted RBP13.63□□□□□ -0.23
TRIM3-210ENST00000530724 MARF1Q9Y4F3 1742 aaKnown RBP13.63□□□□□ -0.23
TRIM3-210ENST00000530724 ADAMTS7Q9UKP4 1686 aa13.63□□□□□ -0.23
TRIM3-210ENST00000530724 MYH15Q9Y2K3 1946 aa13.62□□□□□ -0.23
TRIM3-210ENST00000530724 ZSCAN12O43309 604 aa13.62□□□□□ -0.23
TRIM3-210ENST00000530724 TUBBP07437 444 aa13.62□□□□□ -0.23
TRIM3-210ENST00000530724 AMPHP49418 695 aa13.62□□□□□ -0.23
TRIM3-210ENST00000530724 OS9Q13438 667 aaPredicted RBP13.62□□□□□ -0.23
TRIM3-210ENST00000530724 ARHGAP29Q52LW3 1261 aa13.62□□□□□ -0.23
TRIM3-210ENST00000530724 RSRC2Q7L4I2 434 aaKnown RBP13.62□□□□□ -0.23
TRIM3-210ENST00000530724 BRAPQ7Z569 592 aa13.62□□□□□ -0.23
TRIM3-210ENST00000530724 UBXN4Q92575 508 aa13.62□□□□□ -0.23
TRIM3-210ENST00000530724 ZNF592Q92610 1267 aa13.62□□□□□ -0.23
TRIM3-210ENST00000530724 RABGGTAQ92696 567 aa13.62□□□□□ -0.23
TRIM3-210ENST00000530724 EAF2Q96CJ1 260 aaPredicted RBP13.62□□□□□ -0.23
TRIM3-210ENST00000530724 DSCC1Q9BVC3 393 aa13.62□□□□□ -0.23
TRIM3-210ENST00000530724 YY1AP1Q9H869 796 aa13.62□□□□□ -0.23
TRIM3-210ENST00000530724 TUBE1Q9UJT0 475 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms