RNA–Protein interactions for RNA: ENST00000530157.1

CFL1-208, Transcript of cofilin 1, human

Gene CFL1, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Lamellipodium, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CFL1-208	ENST00000530157	C8orf34	Q49A92	452 aa		11.85	□□□□□ -0.51
CFL1-208	ENST00000530157	NIM1K	Q8IY84	436 aa		11.85	□□□□□ -0.51
CFL1-208	ENST00000530157	FRAT1	Q92837	279 aa	Predicted RBP	11.85	□□□□□ -0.51
CFL1-208	ENST00000530157	VPS33B	Q9H267	617 aa		11.85	□□□□□ -0.51
CFL1-208	ENST00000530157	CELF2	O95319	508 aa	Known RBP	11.84	□□□□□ -0.51
CFL1-208	ENST00000530157	TRIM27	P14373	513 aa		11.84	□□□□□ -0.51
CFL1-208	ENST00000530157	FTSJ3	Q8IY81	847 aa	Known RBP	11.84	□□□□□ -0.51
CFL1-208	ENST00000530157	RTF1	Q92541	710 aa	Known RBP	11.84	□□□□□ -0.51
CFL1-208	ENST00000530157	TSR2	Q969E8	191 aa	Known RBP	11.84	□□□□□ -0.51
CFL1-208	ENST00000530157	CRAMP1	Q96RY5	1269 aa		11.84	□□□□□ -0.51
CFL1-208	ENST00000530157	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.84	□□□□□ -0.51
CFL1-208	ENST00000530157	PGAP2	Q9UHJ9	254 aa		11.84	□□□□□ -0.51
CFL1-208	ENST00000530157	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.84	□□□□□ -0.51
CFL1-208	ENST00000530157	ERVV-1	B6SEH8	477 aa		11.83	□□□□□ -0.52
CFL1-208	ENST00000530157	PPIP5K2	O43314	1243 aa		11.83	□□□□□ -0.52
CFL1-208	ENST00000530157	NOG	Q13253	232 aa		11.83	□□□□□ -0.52
CFL1-208	ENST00000530157	NUTM1	Q86Y26	1132 aa		11.83	□□□□□ -0.52
CFL1-208	ENST00000530157	ZC3H15	Q8WU90	426 aa	Known RBP	11.83	□□□□□ -0.52
CFL1-208	ENST00000530157	RBM17	Q96I25	401 aa	Known RBP	11.83	□□□□□ -0.52
CFL1-208	ENST00000530157	PHACTR3	Q96KR7	559 aa		11.83	□□□□□ -0.52
CFL1-208	ENST00000530157	TMX4	Q9H1E5	349 aa	Predicted RBP	11.83	□□□□□ -0.52
CFL1-208	ENST00000530157	CDHR2	Q9BYE9	1310 aa		11.83	□□□□□ -0.52
CFL1-208	ENST00000530157	PPEF1	O14829	653 aa	Predicted RBP	11.82	□□□□□ -0.52
CFL1-208	ENST00000530157	CIAPIN1	Q6FI81	312 aa		11.82	□□□□□ -0.52
CFL1-208	ENST00000530157	DCBLD2	Q96PD2	775 aa		11.82	□□□□□ -0.52
CFL1-208	ENST00000530157	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.82	□□□□□ -0.52
CFL1-208	ENST00000530157	PCDHB15	Q9Y5E8	787 aa		11.82	□□□□□ -0.52
CFL1-208	ENST00000530157	ANKRD36C	Q5JPF3	1778 aa		11.82	□□□□□ -0.52
CFL1-208	ENST00000530157	KDM3B	Q7LBC6	1761 aa		11.82	□□□□□ -0.52
CFL1-208	ENST00000530157	DLG5	Q8TDM6	1919 aa		11.82	□□□□□ -0.52
CFL1-208	ENST00000530157	VAMP4	O75379	141 aa		11.81	□□□□□ -0.52
CFL1-208	ENST00000530157	CXCL9	Q07325	125 aa		11.81	□□□□□ -0.52
CFL1-208	ENST00000530157	CDC37L1	Q7L3B6	337 aa		11.81	□□□□□ -0.52
CFL1-208	ENST00000530157	SUPT20H	Q8NEM7	779 aa		11.81	□□□□□ -0.52
CFL1-208	ENST00000530157	ZBTB40	Q9NUA8	1239 aa		11.81	□□□□□ -0.52
CFL1-208	ENST00000530157	ZNRF3	Q9ULT6	936 aa		11.81	□□□□□ -0.52
CFL1-208	ENST00000530157	LAMB2	P55268	1798 aa		11.81	□□□□□ -0.52
CFL1-208	ENST00000530157	MAP3K15	Q6ZN16	1313 aa		11.81	□□□□□ -0.52
CFL1-208	ENST00000530157	HTATSF1	O43719	755 aa	Known RBP	11.8	□□□□□ -0.52
CFL1-208	ENST00000530157	AOC3	Q16853	763 aa		11.8	□□□□□ -0.52
CFL1-208	ENST00000530157	KIF6	Q6ZMV9	814 aa		11.8	□□□□□ -0.52
CFL1-208	ENST00000530157	MCM10	Q7L590	875 aa		11.8	□□□□□ -0.52
CFL1-208	ENST00000530157	MRPL50	Q8N5N7	158 aa	Known RBP	11.8	□□□□□ -0.52
CFL1-208	ENST00000530157	OTUD5	Q96G74	571 aa		11.8	□□□□□ -0.52
CFL1-208	ENST00000530157	NOB1	Q9ULX3	412 aa	Known RBP	11.8	□□□□□ -0.52
CFL1-208	ENST00000530157	ATP6V0A2	Q9Y487	856 aa		11.8	□□□□□ -0.52
CFL1-208	ENST00000530157	GMPS	P49915	693 aa	Predicted RBP	11.79	□□□□□ -0.52
CFL1-208	ENST00000530157	TAF7	Q15545	349 aa	Predicted RBP	11.79	□□□□□ -0.52
CFL1-208	ENST00000530157	SMC5	Q8IY18	1101 aa		11.79	□□□□□ -0.52
CFL1-208	ENST00000530157	BCL2L13	Q9BXK5	485 aa		11.79	□□□□□ -0.52
CFL1-208	ENST00000530157	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.79	□□□□□ -0.52
CFL1-208	ENST00000530157	ZNF408	Q9H9D4	720 aa		11.79	□□□□□ -0.52
CFL1-208	ENST00000530157	SAGE1	Q9NXZ1	904 aa		11.79	□□□□□ -0.52
CFL1-208	ENST00000530157	ABCC4	O15439	1325 aa		11.79	□□□□□ -0.52
CFL1-208	ENST00000530157	UBN2	Q6ZU65	1347 aa		11.79	□□□□□ -0.52
CFL1-208	ENST00000530157	CHL1	O00533	1208 aa		11.78	□□□□□ -0.52
CFL1-208	ENST00000530157	GPT	P24298	496 aa		11.78	□□□□□ -0.52
CFL1-208	ENST00000530157	HUNK	P57058	714 aa		11.78	□□□□□ -0.52
CFL1-208	ENST00000530157	TNIP1	Q15025	636 aa		11.78	□□□□□ -0.52
CFL1-208	ENST00000530157	SUSD4	Q5VX71	490 aa		11.78	□□□□□ -0.52
CFL1-208	ENST00000530157	NLRP3	Q96P20	1036 aa		11.78	□□□□□ -0.52
CFL1-208	ENST00000530157	API5	Q9BZZ5	524 aa	Known RBP	11.78	□□□□□ -0.52
CFL1-208	ENST00000530157	MBIP	Q9NS73	344 aa		11.78	□□□□□ -0.52
CFL1-208	ENST00000530157	BABAM1	Q9NWV8	329 aa		11.78	□□□□□ -0.52
CFL1-208	ENST00000530157	POTEM	A6NI47	508 aa		11.77	□□□□□ -0.53
CFL1-208	ENST00000530157		H7C1D1	291 aa		11.77	□□□□□ -0.53
CFL1-208	ENST00000530157	NTSR2	O95665	410 aa		11.77	□□□□□ -0.53
CFL1-208	ENST00000530157	HIRA	P54198	1017 aa	Predicted RBP	11.77	□□□□□ -0.53
CFL1-208	ENST00000530157	PRPF38B	Q5VTL8	546 aa	Known RBP	11.77	□□□□□ -0.53
CFL1-208	ENST00000530157	PPP1R42	Q7Z4L9	355 aa		11.77	□□□□□ -0.53
CFL1-208	ENST00000530157	ZNF34	Q8IZ26	560 aa		11.77	□□□□□ -0.53
CFL1-208	ENST00000530157	ZNF579	Q8NAF0	562 aa	Known RBP	11.77	□□□□□ -0.53
CFL1-208	ENST00000530157	ZIC5	Q96T25	663 aa		11.77	□□□□□ -0.53
CFL1-208	ENST00000530157	TNN	Q9UQP3	1299 aa		11.77	□□□□□ -0.53
CFL1-208	ENST00000530157	TAF1	P21675	1872 aa		11.76	□□□□□ -0.53
CFL1-208	ENST00000530157	BBOX1	O75936	387 aa		11.76	□□□□□ -0.53
CFL1-208	ENST00000530157	KIAA2012	Q0VF49	1180 aa		11.76	□□□□□ -0.53
CFL1-208	ENST00000530157	DCTN1	Q14203	1278 aa		11.76	□□□□□ -0.53
CFL1-208	ENST00000530157	TWISTNB	Q3B726	338 aa	Predicted RBP	11.76	□□□□□ -0.53
CFL1-208	ENST00000530157	PARP10	Q53GL7	1025 aa		11.76	□□□□□ -0.53
CFL1-208	ENST00000530157	SLC10A5	Q5PT55	438 aa		11.76	□□□□□ -0.53
CFL1-208	ENST00000530157	RGMB	Q6NW40	437 aa		11.76	□□□□□ -0.53
CFL1-208	ENST00000530157	DPP8	Q6V1X1	898 aa	Predicted RBP	11.76	□□□□□ -0.53
CFL1-208	ENST00000530157	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.76	□□□□□ -0.53
CFL1-208	ENST00000530157	TTLL7	Q6ZT98	887 aa		11.76	□□□□□ -0.53
CFL1-208	ENST00000530157	SLC51A	Q86UW1	340 aa		11.76	□□□□□ -0.53
CFL1-208	ENST00000530157	SP8	Q8IXZ3	490 aa		11.76	□□□□□ -0.53
CFL1-208	ENST00000530157	TMEM57	Q8N5G2	664 aa		11.76	□□□□□ -0.53
CFL1-208	ENST00000530157	TRPM4	Q8TD43	1214 aa		11.76	□□□□□ -0.53
CFL1-208	ENST00000530157	CCDC102A	Q96A19	550 aa		11.76	□□□□□ -0.53
CFL1-208	ENST00000530157	CNOT7	Q9UIV1	285 aa	Known RBP	11.76	□□□□□ -0.53
CFL1-208	ENST00000530157	LRRC37A	A6NMS7	1700 aa		11.75	□□□□□ -0.53
CFL1-208	ENST00000530157	DDX60	Q8IY21	1712 aa	Known RBP	11.75	□□□□□ -0.53
CFL1-208	ENST00000530157	FAM155A	B1AL88	458 aa	Predicted RBP	11.75	□□□□□ -0.53
CFL1-208	ENST00000530157	RGS3	P49796	1198 aa		11.75	□□□□□ -0.53
CFL1-208	ENST00000530157	SOX10	P56693	466 aa		11.75	□□□□□ -0.53
CFL1-208	ENST00000530157	C3orf67	Q6ZVT6	689 aa		11.75	□□□□□ -0.53
CFL1-208	ENST00000530157	ITPRIP	Q8IWB1	547 aa		11.75	□□□□□ -0.53
CFL1-208	ENST00000530157	MPND	Q8N594	471 aa		11.75	□□□□□ -0.53
CFL1-208	ENST00000530157	ZBTB3	Q9H5J0	574 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms