RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 C9orf84Q5VXU9 1444 aa8.13□□□□□ -1.11
AMBRA1-209ENST00000529963 ATP10AO60312 1499 aa8.13□□□□□ -1.11
AMBRA1-209ENST00000529963 KIF14Q15058 1648 aa8.13□□□□□ -1.11
AMBRA1-209ENST00000529963 EFSO43281 561 aa8.13□□□□□ -1.11
AMBRA1-209ENST00000529963 CTBSQ01459 385 aa8.13□□□□□ -1.11
AMBRA1-209ENST00000529963 LCE2CQ5TA81 110 aa8.13□□□□□ -1.11
AMBRA1-209ENST00000529963 RAB44Q7Z6P3 723 aaPredicted RBP8.13□□□□□ -1.11
AMBRA1-209ENST00000529963 MYO5CQ9NQX4 1742 aa8.13□□□□□ -1.11
AMBRA1-209ENST00000529963 A6NHS1 94 aa8.12□□□□□ -1.11
AMBRA1-209ENST00000529963 FGFR3P22607 806 aa8.12□□□□□ -1.11
AMBRA1-209ENST00000529963 NFX1Q12986 1120 aaKnown RBP8.12□□□□□ -1.11
AMBRA1-209ENST00000529963 GAS6Q14393 721 aa8.12□□□□□ -1.11
AMBRA1-209ENST00000529963 RNFT1Q5M7Z0 435 aa8.12□□□□□ -1.11
AMBRA1-209ENST00000529963 NPAS3Q8IXF0 933 aa8.12□□□□□ -1.11
AMBRA1-209ENST00000529963 SLC16A10Q8TF71 515 aa8.12□□□□□ -1.11
AMBRA1-209ENST00000529963 NUDT16Q96DE0 195 aaKnown RBP8.12□□□□□ -1.11
AMBRA1-209ENST00000529963 ATXN7L1Q9ULK2 861 aaPredicted RBP8.12□□□□□ -1.11
AMBRA1-209ENST00000529963 KCNH4Q9UQ05 1017 aa8.12□□□□□ -1.11
AMBRA1-209ENST00000529963 SETD1BQ9UPS6 1966 aaKnown RBP8.12□□□□□ -1.11
AMBRA1-209ENST00000529963 ZNF518AQ6AHZ1 1483 aa8.12□□□□□ -1.11
AMBRA1-209ENST00000529963 ARHGAP5Q13017 1502 aa8.12□□□□□ -1.11
AMBRA1-209ENST00000529963 PDGFAP04085 211 aa8.11□□□□□ -1.11
AMBRA1-209ENST00000529963 TRIP4Q15650 581 aaPredicted RBP8.11□□□□□ -1.11
AMBRA1-209ENST00000529963 ALKBH2Q6NS38 261 aa8.11□□□□□ -1.11
AMBRA1-209ENST00000529963 MARK1Q9P0L2 795 aa8.11□□□□□ -1.11
AMBRA1-209ENST00000529963 FER1L4A9Z1Z3 1794 aa8.11□□□□□ -1.11
AMBRA1-209ENST00000529963 C2CD2LO14523 706 aa8.1□□□□□ -1.11
AMBRA1-209ENST00000529963 STRCQ7RTU9 1775 aa8.1□□□□□ -1.11
AMBRA1-209ENST00000529963 KRT25Q7Z3Z0 450 aa8.1□□□□□ -1.11
AMBRA1-209ENST00000529963 SLC30A3Q99726 388 aa8.1□□□□□ -1.11
AMBRA1-209ENST00000529963 CFHR5Q9BXR6 569 aa8.1□□□□□ -1.11
AMBRA1-209ENST00000529963 COL25A1Q9BXS0 654 aaPredicted RBP8.1□□□□□ -1.11
AMBRA1-209ENST00000529963 GGNBP2Q9H3C7 697 aa8.1□□□□□ -1.11
AMBRA1-209ENST00000529963 ARHGEF12Q9NZN5 1544 aa8.1□□□□□ -1.11
AMBRA1-209ENST00000529963 BRPF3Q9ULD4 1205 aa8.1□□□□□ -1.11
AMBRA1-209ENST00000529963 KCNMB2Q9Y691 235 aa8.1□□□□□ -1.11
AMBRA1-209ENST00000529963 SIGLEC1Q9BZZ2 1709 aa8.1□□□□□ -1.11
AMBRA1-209ENST00000529963 MED1Q15648 1581 aaPredicted RBP8.09□□□□□ -1.11
AMBRA1-209ENST00000529963 UBAP1LF5GYI3 381 aa8.09□□□□□ -1.11
AMBRA1-209ENST00000529963 MAPK1P28482 360 aa8.09□□□□□ -1.11
AMBRA1-209ENST00000529963 C8orf34Q49A92 452 aa8.09□□□□□ -1.11
AMBRA1-209ENST00000529963 AFAP1Q8N556 730 aa8.09□□□□□ -1.11
AMBRA1-209ENST00000529963 PIK3R5Q8WYR1 880 aa8.09□□□□□ -1.11
AMBRA1-209ENST00000529963 PHF24Q9UPV7 400 aa8.09□□□□□ -1.11
AMBRA1-209ENST00000529963 KDM5CP41229 1560 aa8.09□□□□□ -1.11
AMBRA1-209ENST00000529963 CCDC18Q5T9S5 1454 aa8.09□□□□□ -1.11
AMBRA1-209ENST00000529963 UHRF1BP1Q6BDS2 1440 aa8.09□□□□□ -1.11
AMBRA1-209ENST00000529963 MZF1P28698 734 aaPredicted RBP8.08□□□□□ -1.12
AMBRA1-209ENST00000529963 KRT76Q01546 638 aa8.08□□□□□ -1.12
AMBRA1-209ENST00000529963 TMCO4Q5TGY1 634 aa8.08□□□□□ -1.12
AMBRA1-209ENST00000529963 TMC1Q8TDI8 760 aa8.08□□□□□ -1.12
AMBRA1-209ENST00000529963 IRF7Q92985 503 aa8.08□□□□□ -1.12
AMBRA1-209ENST00000529963 XYLBO75191 536 aa8.08□□□□□ -1.12
AMBRA1-209ENST00000529963 SASH3O75995 380 aa8.08□□□□□ -1.12
AMBRA1-209ENST00000529963 VSIG8P0DPA2 414 aa8.08□□□□□ -1.12
AMBRA1-209ENST00000529963 EPB42P16452 691 aa8.08□□□□□ -1.12
AMBRA1-209ENST00000529963 MX2P20592 715 aa8.08□□□□□ -1.12
AMBRA1-209ENST00000529963 MARSP56192 900 aaKnown RBP8.08□□□□□ -1.12
AMBRA1-209ENST00000529963 SPEM2Q0P670 501 aa8.08□□□□□ -1.12
AMBRA1-209ENST00000529963 CNTNAP3BQ96NU0 1288 aa8.08□□□□□ -1.12
AMBRA1-209ENST00000529963 CNTNAP3Q9BZ76 1288 aa8.08□□□□□ -1.12
AMBRA1-209ENST00000529963 CASKIN1Q8WXD9 1431 aa8.07□□□□□ -1.12
AMBRA1-209ENST00000529963 LTBP4Q8N2S1 1624 aa8.07□□□□□ -1.12
AMBRA1-209ENST00000529963 NDUFB5O43674 189 aa8.07□□□□□ -1.12
AMBRA1-209ENST00000529963 WFS1O76024 890 aa8.07□□□□□ -1.12
AMBRA1-209ENST00000529963 BMP4P12644 408 aa8.07□□□□□ -1.12
AMBRA1-209ENST00000529963 TARSP26639 723 aaKnown RBP8.07□□□□□ -1.12
AMBRA1-209ENST00000529963 KCNQ4P56696 695 aa8.07□□□□□ -1.12
AMBRA1-209ENST00000529963 GSX2Q9BZM3 304 aa8.07□□□□□ -1.12
AMBRA1-209ENST00000529963 FAM13BQ9NYF5 915 aa8.07□□□□□ -1.12
AMBRA1-209ENST00000529963 DCTN4Q9UJW0 460 aa8.07□□□□□ -1.12
AMBRA1-209ENST00000529963 MLH3Q9UHC1 1453 aa8.07□□□□□ -1.12
AMBRA1-209ENST00000529963 REREQ9P2R6 1566 aa8.06□□□□□ -1.12
AMBRA1-209ENST00000529963 GMPRP36959 345 aa8.06□□□□□ -1.12
AMBRA1-209ENST00000529963 CEBPAP49715 358 aaPredicted RBP8.06□□□□□ -1.12
AMBRA1-209ENST00000529963 LAMC2Q13753 1193 aa8.06□□□□□ -1.12
AMBRA1-209ENST00000529963 CCDC27Q2M243 656 aa8.06□□□□□ -1.12
AMBRA1-209ENST00000529963 BHMTQ93088 406 aa8.06□□□□□ -1.12
AMBRA1-209ENST00000529963 PRR12Q9ULL5 1215 aa8.06□□□□□ -1.12
AMBRA1-209ENST00000529963 DIP2CQ9Y2E4 1556 aa8.05□□□□□ -1.12
AMBRA1-209ENST00000529963 ABCC1P33527 1531 aa8.05□□□□□ -1.12
AMBRA1-209ENST00000529963 CCINQ13939 588 aa8.05□□□□□ -1.12
AMBRA1-209ENST00000529963 PREX2Q70Z35 1606 aa8.05□□□□□ -1.12
AMBRA1-209ENST00000529963 LRRIQ1Q96JM4 1722 aa8.05□□□□□ -1.12
AMBRA1-209ENST00000529963 FYCO1Q9BQS8 1478 aa8.04□□□□□ -1.12
AMBRA1-209ENST00000529963 NFKB1P19838 968 aa8.04□□□□□ -1.12
AMBRA1-209ENST00000529963 PCBP4P57723 403 aaKnown RBP8.04□□□□□ -1.12
AMBRA1-209ENST00000529963 TMC7Q7Z402 723 aa8.04□□□□□ -1.12
AMBRA1-209ENST00000529963 GJD3Q8N144 294 aa8.04□□□□□ -1.12
AMBRA1-209ENST00000529963 TTC16Q8NEE8 873 aa8.04□□□□□ -1.12
AMBRA1-209ENST00000529963 PNMA5Q96PV4 448 aa8.04□□□□□ -1.12
AMBRA1-209ENST00000529963 IGFLR1Q9H665 355 aa8.04□□□□□ -1.12
AMBRA1-209ENST00000529963 MBIPQ9NS73 344 aa8.04□□□□□ -1.12
AMBRA1-209ENST00000529963 TMEM63CQ9P1W3 806 aa8.04□□□□□ -1.12
AMBRA1-209ENST00000529963 ZFATQ9P243 1243 aa8.04□□□□□ -1.12
AMBRA1-209ENST00000529963 TRAPPC8Q9Y2L5 1435 aa8.04□□□□□ -1.12
AMBRA1-209ENST00000529963 CDC42BPBQ9Y5S2 1711 aa8.04□□□□□ -1.12
AMBRA1-209ENST00000529963 AGLP35573 1532 aa8.04□□□□□ -1.12
AMBRA1-209ENST00000529963 ABCA6Q8N139 1617 aa8.04□□□□□ -1.12
AMBRA1-209ENST00000529963 PCSK2P16519 638 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms