RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 ZNF157P51786 506 aaPredicted RBP20.92■□□□□ 0.94
COL16A1-216ENST00000529928 RPS8P62241 208 aaKnown RBP20.92■□□□□ 0.94
COL16A1-216ENST00000529928 KIF4BQ2VIQ3 1234 aa20.92■□□□□ 0.94
COL16A1-216ENST00000529928 SULF1Q8IWU6 871 aa20.92■□□□□ 0.94
COL16A1-216ENST00000529928 TBC1D16Q8TBP0 767 aa20.92■□□□□ 0.94
COL16A1-216ENST00000529928 ZC3H12CQ9C0D7 883 aaKnown RBP20.92■□□□□ 0.94
COL16A1-216ENST00000529928 KCNQ5Q9NR82 932 aa20.92■□□□□ 0.94
COL16A1-216ENST00000529928 HYPKQ9NX55 129 aa20.92■□□□□ 0.94
COL16A1-216ENST00000529928 KIF23Q02241 960 aaPredicted RBP20.91■□□□□ 0.94
COL16A1-216ENST00000529928 TRIM28Q13263 835 aaKnown RBP20.91■□□□□ 0.94
COL16A1-216ENST00000529928 RTL5Q5HYW3 569 aaPredicted RBP20.91■□□□□ 0.94
COL16A1-216ENST00000529928 COL4A1P02462 1669 aa20.9■□□□□ 0.94
COL16A1-216ENST00000529928 VIL1P09327 827 aaKnown RBP20.9■□□□□ 0.94
COL16A1-216ENST00000529928 HSP90B1P14625 803 aaKnown RBP20.9■□□□□ 0.94
COL16A1-216ENST00000529928 CCDC146Q8IYE0 955 aa20.9■□□□□ 0.94
COL16A1-216ENST00000529928 GGA3Q9NZ52 723 aa20.9■□□□□ 0.94
COL16A1-216ENST00000529928 PODXL2Q9NZ53 605 aa20.9■□□□□ 0.94
COL16A1-216ENST00000529928 TRIM35Q9UPQ4 493 aa20.9■□□□□ 0.94
COL16A1-216ENST00000529928 POLR2AP24928 1970 aaKnown RBP20.89■□□□□ 0.93
COL16A1-216ENST00000529928 G3V3G9 751 aa20.89■□□□□ 0.93
COL16A1-216ENST00000529928 DCAF8Q5TAQ9 597 aa20.89■□□□□ 0.93
COL16A1-216ENST00000529928 RUNDC1Q96C34 613 aa20.89■□□□□ 0.93
COL16A1-216ENST00000529928 SLC10A3P09131 477 aa20.88■□□□□ 0.93
COL16A1-216ENST00000529928 ZBTB38Q8NAP3 1195 aaPredicted RBP20.88■□□□□ 0.93
COL16A1-216ENST00000529928 RNF186Q9NXI6 227 aa20.88■□□□□ 0.93
COL16A1-216ENST00000529928 ZNF609O15014 1411 aa20.87■□□□□ 0.93
COL16A1-216ENST00000529928 TRPA1O75762 1119 aa20.87■□□□□ 0.93
COL16A1-216ENST00000529928 UFL1O94874 794 aa20.87■□□□□ 0.93
COL16A1-216ENST00000529928 DUSP27Q5VZP5 1158 aa20.87■□□□□ 0.93
COL16A1-216ENST00000529928 ANKIB1Q9P2G1 1089 aa20.87■□□□□ 0.93
COL16A1-216ENST00000529928 RIC3Q7Z5B4 369 aa20.86■□□□□ 0.93
COL16A1-216ENST00000529928 REM2Q8IYK8 340 aaPredicted RBP20.86■□□□□ 0.93
COL16A1-216ENST00000529928 AGBL3Q8NEM8 1001 aa20.86■□□□□ 0.93
COL16A1-216ENST00000529928 CDCA5Q96FF9 252 aa20.86■□□□□ 0.93
COL16A1-216ENST00000529928 GGA1Q9UJY5 639 aa20.86■□□□□ 0.93
COL16A1-216ENST00000529928 SCN9AQ15858 1988 aa20.86■□□□□ 0.93
COL16A1-216ENST00000529928 MYBBP1AQ9BQG0 1328 aaKnown RBP20.85■□□□□ 0.93
COL16A1-216ENST00000529928 ZNF280AP59817 542 aaPredicted RBP20.85■□□□□ 0.93
COL16A1-216ENST00000529928 GOLGA2Q08379 1002 aa20.85■□□□□ 0.93
COL16A1-216ENST00000529928 WDR43Q15061 677 aaKnown RBP eCLIP20.85■□□□□ 0.93
COL16A1-216ENST00000529928 CSRNP1Q96S65 589 aa20.85■□□□□ 0.93
COL16A1-216ENST00000529928 SEC31BQ9NQW1 1179 aa20.85■□□□□ 0.93
COL16A1-216ENST00000529928 AKAP11Q9UKA4 1901 aa20.84■□□□□ 0.93
COL16A1-216ENST00000529928 ASTN2O75129 1339 aaPredicted RBP20.84■□□□□ 0.93
COL16A1-216ENST00000529928 CCDC152Q4G0S7 254 aa20.84■□□□□ 0.93
COL16A1-216ENST00000529928 RSBN1LQ6PCB5 846 aaPredicted RBP20.84■□□□□ 0.93
COL16A1-216ENST00000529928 FKBP1BP68106 108 aa20.83■□□□□ 0.93
COL16A1-216ENST00000529928 SCARF1Q14162 830 aa20.83■□□□□ 0.93
COL16A1-216ENST00000529928 ANGEL2Q5VTE6 544 aaKnown RBP20.83■□□□□ 0.93
COL16A1-216ENST00000529928 CCDC191Q8NCU4 936 aa20.82■□□□□ 0.92
COL16A1-216ENST00000529928 MBIPQ9NS73 344 aa20.82■□□□□ 0.92
COL16A1-216ENST00000529928 PITPNM2Q9BZ72 1349 aa20.81■□□□□ 0.92
COL16A1-216ENST00000529928 PDE8AO60658 829 aa20.81■□□□□ 0.92
COL16A1-216ENST00000529928 PCCAP05165 728 aaPredicted RBP20.81■□□□□ 0.92
COL16A1-216ENST00000529928 USP17L8P0C7I0 530 aa20.81■□□□□ 0.92
COL16A1-216ENST00000529928 CTU1Q7Z7A3 348 aaKnown RBP20.81■□□□□ 0.92
COL16A1-216ENST00000529928 RASAL3Q86YV0 1011 aa20.81■□□□□ 0.92
COL16A1-216ENST00000529928 MYD88Q99836 296 aa20.81■□□□□ 0.92
COL16A1-216ENST00000529928 MYOZ2Q9NPC6 264 aa20.81■□□□□ 0.92
COL16A1-216ENST00000529928 PCDH10Q9P2E7 1040 aa20.81■□□□□ 0.92
COL16A1-216ENST00000529928 PAPPA2Q9BXP8 1791 aa20.81■□□□□ 0.92
COL16A1-216ENST00000529928 XDHP47989 1333 aa20.8■□□□□ 0.92
COL16A1-216ENST00000529928 PODNQ7Z5L7 613 aa20.8■□□□□ 0.92
COL16A1-216ENST00000529928 GMLQ99445 158 aa20.8■□□□□ 0.92
COL16A1-216ENST00000529928 PHAXQ9H814 394 aaKnown RBP20.8■□□□□ 0.92
COL16A1-216ENST00000529928 PSME4Q14997 1843 aa20.8■□□□□ 0.92
COL16A1-216ENST00000529928 SOX10P56693 466 aa20.79■□□□□ 0.92
COL16A1-216ENST00000529928 ANKRD18AQ8IVF6 992 aa20.79■□□□□ 0.92
COL16A1-216ENST00000529928 ADAMTS8Q9UP79 889 aa20.79■□□□□ 0.92
COL16A1-216ENST00000529928 USP17L3A6NCW0 530 aa20.78■□□□□ 0.92
COL16A1-216ENST00000529928 USP17L4A6NCW7 530 aa20.78■□□□□ 0.92
COL16A1-216ENST00000529928 ATP2B4P23634 1241 aa20.78■□□□□ 0.92
COL16A1-216ENST00000529928 USP17L1Q7RTZ2 530 aa20.78■□□□□ 0.92
COL16A1-216ENST00000529928 CWC25Q9NXE8 425 aaPredicted RBP20.78■□□□□ 0.92
COL16A1-216ENST00000529928 ZNF853P0CG23 659 aa20.77■□□□□ 0.92
COL16A1-216ENST00000529928 CCDC85AQ96PX6 553 aaPredicted RBP20.77■□□□□ 0.92
COL16A1-216ENST00000529928 TNRC18O15417 2968 aaPredicted RBP20.76■□□□□ 0.91
COL16A1-216ENST00000529928 DDX58O95786 925 aaKnown RBP20.76■□□□□ 0.91
COL16A1-216ENST00000529928 IFT57Q9NWB7 429 aa20.76■□□□□ 0.91
COL16A1-216ENST00000529928 GNAI1P63096 354 aa20.75■□□□□ 0.91
COL16A1-216ENST00000529928 CALD1Q05682 793 aaKnown RBP20.75■□□□□ 0.91
COL16A1-216ENST00000529928 PKN2Q16513 984 aaKnown RBP20.75■□□□□ 0.91
COL16A1-216ENST00000529928 CDC5LQ99459 802 aaKnown RBP20.75■□□□□ 0.91
COL16A1-216ENST00000529928 METTL22Q9BUU2 404 aaPredicted RBP20.75■□□□□ 0.91
COL16A1-216ENST00000529928 CHMP4AQ9BY43 222 aa20.75■□□□□ 0.91
COL16A1-216ENST00000529928 MED23Q9ULK4 1368 aa20.74■□□□□ 0.91
COL16A1-216ENST00000529928 ELL2O00472 640 aaPredicted RBP20.74■□□□□ 0.91
COL16A1-216ENST00000529928 OGFOD1Q8N543 542 aa20.74■□□□□ 0.91
COL16A1-216ENST00000529928 JARID2Q92833 1246 aaPredicted RBP20.74■□□□□ 0.91
COL16A1-216ENST00000529928 PDE4DIPQ5VU43 2346 aa20.73■□□□□ 0.91
COL16A1-216ENST00000529928 CTSWP56202 376 aa20.73■□□□□ 0.91
COL16A1-216ENST00000529928 HDAC9Q9UKV0 1011 aa20.73■□□□□ 0.91
COL16A1-216ENST00000529928 UBE2Q2LH0YL09 131 aa20.72■□□□□ 0.91
COL16A1-216ENST00000529928 NBPF9Q3BBW0 867 aa20.72■□□□□ 0.91
COL16A1-216ENST00000529928 MOB2Q70IA6 237 aa20.72■□□□□ 0.91
COL16A1-216ENST00000529928 BSDC1Q9NW68 430 aaPredicted RBP20.72■□□□□ 0.91
COL16A1-216ENST00000529928 HPS5Q9UPZ3 1129 aa20.72■□□□□ 0.91
COL16A1-216ENST00000529928 MYO3BQ8WXR4 1341 aa20.72■□□□□ 0.91
COL16A1-216ENST00000529928 NF2P35240 595 aa20.71■□□□□ 0.91
COL16A1-216ENST00000529928 DDX10Q13206 875 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms