RNA–Protein interactions for RNA: ENST00000529922.1

AP001999.3-201, humanhuman

TSL 2 BASIC

Gene AP001999.3, Length 455 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001999.3-201ENST00000529922 EYA3Q99504 573 aa11.87□□□□□ -0.51
AP001999.3-201ENST00000529922 CNOT7Q9UIV1 285 aaKnown RBP11.87□□□□□ -0.51
AP001999.3-201ENST00000529922 NEURL1BA8MQ27 555 aa11.86□□□□□ -0.51
AP001999.3-201ENST00000529922 TRAF5O00463 557 aa11.86□□□□□ -0.51
AP001999.3-201ENST00000529922 PSMD14O00487 310 aa11.86□□□□□ -0.51
AP001999.3-201ENST00000529922 TTLL11Q8NHH1 800 aa11.86□□□□□ -0.51
AP001999.3-201ENST00000529922 TRPM4Q8TD43 1214 aa11.86□□□□□ -0.51
AP001999.3-201ENST00000529922 BCL2L13Q9BXK5 485 aa11.86□□□□□ -0.51
AP001999.3-201ENST00000529922 DBNDD1Q9H9R9 158 aa11.86□□□□□ -0.51
AP001999.3-201ENST00000529922 KCNQ5Q9NR82 932 aa11.86□□□□□ -0.51
AP001999.3-201ENST00000529922 WBP1LQ9NX94 342 aa11.86□□□□□ -0.51
AP001999.3-201ENST00000529922 COL4A1P02462 1669 aa11.86□□□□□ -0.51
AP001999.3-201ENST00000529922 LAMB2P55268 1798 aa11.86□□□□□ -0.51
AP001999.3-201ENST00000529922 FANCIQ9NVI1 1328 aa11.86□□□□□ -0.51
AP001999.3-201ENST00000529922 RTL9Q8NET4 1388 aa11.85□□□□□ -0.51
AP001999.3-201ENST00000529922 SHTN1A0MZ66 631 aa11.85□□□□□ -0.51
AP001999.3-201ENST00000529922 H7C1D1 291 aa11.85□□□□□ -0.51
AP001999.3-201ENST00000529922 RIMBP2O15034 1052 aa11.85□□□□□ -0.51
AP001999.3-201ENST00000529922 VIL1P09327 827 aaKnown RBP11.85□□□□□ -0.51
AP001999.3-201ENST00000529922 RPS12P25398 132 aaKnown RBP11.85□□□□□ -0.51
AP001999.3-201ENST00000529922 CTSWP56202 376 aa11.85□□□□□ -0.51
AP001999.3-201ENST00000529922 NEXNQ0ZGT2 675 aa11.85□□□□□ -0.51
AP001999.3-201ENST00000529922 FLIIQ13045 1269 aa11.85□□□□□ -0.51
AP001999.3-201ENST00000529922 GPR101Q96P66 508 aaPredicted RBP11.85□□□□□ -0.51
AP001999.3-201ENST00000529922 PLA2G12BQ9BX93 195 aa11.85□□□□□ -0.51
AP001999.3-201ENST00000529922 ZC3H12CQ9C0D7 883 aaKnown RBP11.85□□□□□ -0.51
AP001999.3-201ENST00000529922 SPINK5Q9NQ38 1064 aaPredicted RBP11.85□□□□□ -0.51
AP001999.3-201ENST00000529922 ZBTB12Q9Y330 459 aaPredicted RBP11.85□□□□□ -0.51
AP001999.3-201ENST00000529922 DDX60Q8IY21 1712 aaKnown RBP11.85□□□□□ -0.51
AP001999.3-201ENST00000529922 TAF1P21675 1872 aa11.85□□□□□ -0.51
AP001999.3-201ENST00000529922 LRRC37AA6NMS7 1700 aa11.84□□□□□ -0.51
AP001999.3-201ENST00000529922 ECE2O60344 883 aa11.84□□□□□ -0.51
AP001999.3-201ENST00000529922 CASP7P55210 303 aa11.84□□□□□ -0.51
AP001999.3-201ENST00000529922 DOK7Q18PE1 504 aa11.84□□□□□ -0.51
AP001999.3-201ENST00000529922 CWF19L2Q2TBE0 894 aaKnown RBP11.84□□□□□ -0.51
AP001999.3-201ENST00000529922 ANKRD18AQ8IVF6 992 aa11.84□□□□□ -0.51
AP001999.3-201ENST00000529922 MICALL2Q8IY33 904 aa11.84□□□□□ -0.51
AP001999.3-201ENST00000529922 CCDC85AQ96PX6 553 aaPredicted RBP11.84□□□□□ -0.51
AP001999.3-201ENST00000529922 BSDC1Q9NW68 430 aaPredicted RBP11.84□□□□□ -0.51
AP001999.3-201ENST00000529922 GGA1Q9UJY5 639 aa11.84□□□□□ -0.51
AP001999.3-201ENST00000529922 WDR33Q9C0J8 1336 aaKnown RBP11.84□□□□□ -0.51
AP001999.3-201ENST00000529922 FOXN1O15353 648 aa11.83□□□□□ -0.52
AP001999.3-201ENST00000529922 UFL1O94874 794 aa11.83□□□□□ -0.52
AP001999.3-201ENST00000529922 CSF1RP07333 972 aa11.83□□□□□ -0.52
AP001999.3-201ENST00000529922 GCKRQ14397 625 aa11.83□□□□□ -0.52
AP001999.3-201ENST00000529922 CDC37L1Q7L3B6 337 aa11.83□□□□□ -0.52
AP001999.3-201ENST00000529922 LINS1Q8NG48 757 aa11.83□□□□□ -0.52
AP001999.3-201ENST00000529922 DNAAF4Q8WXU2 420 aa11.83□□□□□ -0.52
AP001999.3-201ENST00000529922 CDC5LQ99459 802 aaKnown RBP11.83□□□□□ -0.52
AP001999.3-201ENST00000529922 GLIS2Q9BZE0 524 aaPredicted RBP11.83□□□□□ -0.52
AP001999.3-201ENST00000529922 GREM2Q9H772 168 aa11.83□□□□□ -0.52
AP001999.3-201ENST00000529922 ANKIB1Q9P2G1 1089 aa11.83□□□□□ -0.52
AP001999.3-201ENST00000529922 ABT1Q9ULW3 272 aaKnown RBP11.83□□□□□ -0.52
AP001999.3-201ENST00000529922 MINPP1Q9UNW1 487 aa11.83□□□□□ -0.52
AP001999.3-201ENST00000529922 TLL2Q9Y6L7 1015 aa11.83□□□□□ -0.52
AP001999.3-201ENST00000529922 XDHP47989 1333 aa11.83□□□□□ -0.52
AP001999.3-201ENST00000529922 EGFRP00533 1210 aa11.82□□□□□ -0.52
AP001999.3-201ENST00000529922 ATP2B4P23634 1241 aa11.82□□□□□ -0.52
AP001999.3-201ENST00000529922 EXOSC9Q06265 439 aaKnown RBP11.82□□□□□ -0.52
AP001999.3-201ENST00000529922 SAMD7Q7Z3H4 446 aa11.82□□□□□ -0.52
AP001999.3-201ENST00000529922 SAPCD2Q86UD0 394 aa11.82□□□□□ -0.52
AP001999.3-201ENST00000529922 HHIPL1Q96JK4 782 aa11.82□□□□□ -0.52
AP001999.3-201ENST00000529922 PRDM10Q9NQV6 1147 aa11.82□□□□□ -0.52
AP001999.3-201ENST00000529922 SALL2Q9Y467 1007 aaPredicted RBP11.82□□□□□ -0.52
AP001999.3-201ENST00000529922 WTIPA6NIX2 430 aaPredicted RBP11.81□□□□□ -0.52
AP001999.3-201ENST00000529922 CELF2O95319 508 aaKnown RBP11.81□□□□□ -0.52
AP001999.3-201ENST00000529922 ZNF280AP59817 542 aaPredicted RBP11.81□□□□□ -0.52
AP001999.3-201ENST00000529922 MAP2K1Q02750 393 aaPredicted RBP11.81□□□□□ -0.52
AP001999.3-201ENST00000529922 FKBP5Q13451 457 aaPredicted RBP11.81□□□□□ -0.52
AP001999.3-201ENST00000529922 UBE3BQ7Z3V4 1068 aa11.81□□□□□ -0.52
AP001999.3-201ENST00000529922 PODNQ7Z5L7 613 aa11.81□□□□□ -0.52
AP001999.3-201ENST00000529922 TNS4Q8IZW8 715 aa11.81□□□□□ -0.52
AP001999.3-201ENST00000529922 AGBL3Q8NEM8 1001 aa11.81□□□□□ -0.52
AP001999.3-201ENST00000529922 GMLQ99445 158 aa11.81□□□□□ -0.52
AP001999.3-201ENST00000529922 ZNF521Q96K83 1311 aa11.81□□□□□ -0.52
AP001999.3-201ENST00000529922 ZNF609O15014 1411 aa11.8□□□□□ -0.52
AP001999.3-201ENST00000529922 ECE1P42892 770 aa11.8□□□□□ -0.52
AP001999.3-201ENST00000529922 CTCFP49711 727 aaPredicted RBP11.8□□□□□ -0.52
AP001999.3-201ENST00000529922 TBC1D10BQ4KMP7 808 aaPredicted RBP11.8□□□□□ -0.52
AP001999.3-201ENST00000529922 BEND3Q5T5X7 828 aa11.8□□□□□ -0.52
AP001999.3-201ENST00000529922 RSBN1LQ6PCB5 846 aaPredicted RBP11.8□□□□□ -0.52
AP001999.3-201ENST00000529922 USP48Q86UV5 1035 aa11.8□□□□□ -0.52
AP001999.3-201ENST00000529922 CAPNS2Q96L46 248 aa11.8□□□□□ -0.52
AP001999.3-201ENST00000529922 MYH16Q9H6N6 1097 aa11.8□□□□□ -0.52
AP001999.3-201ENST00000529922 MAP2K2P36507 400 aa11.79□□□□□ -0.52
AP001999.3-201ENST00000529922 CYP4F22Q6NT55 531 aa11.79□□□□□ -0.52
AP001999.3-201ENST00000529922 FAM9BQ8IZU0 186 aa11.79□□□□□ -0.52
AP001999.3-201ENST00000529922 LEMD3Q9Y2U8 911 aa11.79□□□□□ -0.52
AP001999.3-201ENST00000529922 ITGA6P23229 1130 aa11.78□□□□□ -0.52
AP001999.3-201ENST00000529922 IGHMBP2P38935 993 aaKnown RBP11.78□□□□□ -0.52
AP001999.3-201ENST00000529922 CCT4P50991 539 aaKnown RBP11.78□□□□□ -0.52
AP001999.3-201ENST00000529922 DLK2Q6UY11 383 aa11.78□□□□□ -0.52
AP001999.3-201ENST00000529922 AIDAQ96BJ3 306 aa11.78□□□□□ -0.52
AP001999.3-201ENST00000529922 MED23Q9ULK4 1368 aa11.78□□□□□ -0.52
AP001999.3-201ENST00000529922 USP17L3A6NCW0 530 aa11.77□□□□□ -0.53
AP001999.3-201ENST00000529922 USP17L4A6NCW7 530 aa11.77□□□□□ -0.53
AP001999.3-201ENST00000529922 F6X3S4 739 aa11.77□□□□□ -0.53
AP001999.3-201ENST00000529922 G3V3G9 751 aa11.77□□□□□ -0.53
AP001999.3-201ENST00000529922 HSPA8P11142 646 aaKnown RBP11.77□□□□□ -0.53
AP001999.3-201ENST00000529922 FOXO4P98177 505 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms