RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 WFDC8Q8IUA0 241 aa6.57□□□□□ -1.36
CTR9-205ENST00000529898 PLD4Q96BZ4 506 aa6.57□□□□□ -1.36
CTR9-205ENST00000529898 SSBP4Q9BWG4 385 aaPredicted RBP6.57□□□□□ -1.36
CTR9-205ENST00000529898 TPSG1Q9NRR2 321 aa6.57□□□□□ -1.36
CTR9-205ENST00000529898 J3QW42 95 aa6.56□□□□□ -1.36
CTR9-205ENST00000529898 DEAF1O75398 565 aaPredicted RBP6.56□□□□□ -1.36
CTR9-205ENST00000529898 KIF4AO95239 1232 aa6.56□□□□□ -1.36
CTR9-205ENST00000529898 PDE12Q6L8Q7 609 aaKnown RBP6.56□□□□□ -1.36
CTR9-205ENST00000529898 HFE2Q6ZVN8 426 aa6.56□□□□□ -1.36
CTR9-205ENST00000529898 TXNRD3Q86VQ6 643 aa6.56□□□□□ -1.36
CTR9-205ENST00000529898 GPR152Q8TDT2 470 aa6.56□□□□□ -1.36
CTR9-205ENST00000529898 DLL1O00548 723 aa6.55□□□□□ -1.36
CTR9-205ENST00000529898 RPLP1P05386 114 aaKnown RBP6.55□□□□□ -1.36
CTR9-205ENST00000529898 EIF2AK2P19525 551 aaKnown RBP6.55□□□□□ -1.36
CTR9-205ENST00000529898 PHLDB3Q6NSJ2 640 aa6.55□□□□□ -1.36
CTR9-205ENST00000529898 IGF2-ASQ6U949 168 aa6.55□□□□□ -1.36
CTR9-205ENST00000529898 SHISA2Q6UWI4 295 aa6.55□□□□□ -1.36
CTR9-205ENST00000529898 SRA1Q9HD15 236 aaKnown RBP6.55□□□□□ -1.36
CTR9-205ENST00000529898 GHRHP01286 108 aa6.54□□□□□ -1.36
CTR9-205ENST00000529898 H2AFB1P0C5Y9 115 aa6.54□□□□□ -1.36
CTR9-205ENST00000529898 H2AFB2P0C5Z0 115 aa6.54□□□□□ -1.36
CTR9-205ENST00000529898 COL13A1Q5TAT6 717 aaPredicted RBP6.54□□□□□ -1.36
CTR9-205ENST00000529898 NSUN5Q96P11 429 aaKnown RBP6.54□□□□□ -1.36
CTR9-205ENST00000529898 RBSNQ9H1K0 784 aa6.54□□□□□ -1.36
CTR9-205ENST00000529898 ABI2Q9NYB9 513 aaPredicted RBP6.54□□□□□ -1.36
CTR9-205ENST00000529898 HYAL2Q12891 473 aa6.53□□□□□ -1.36
CTR9-205ENST00000529898 TTC39BQ5VTQ0 682 aaPredicted RBP6.53□□□□□ -1.36
CTR9-205ENST00000529898 C14orf37Q86TY3 774 aa6.53□□□□□ -1.36
CTR9-205ENST00000529898 MAP4K3Q8IVH8 894 aa6.53□□□□□ -1.36
CTR9-205ENST00000529898 TMEM130Q8N3G9 435 aa6.53□□□□□ -1.36
CTR9-205ENST00000529898 CEP120Q8N960 986 aa6.53□□□□□ -1.36
CTR9-205ENST00000529898 GTF3C2Q8WUA4 911 aaPredicted RBP6.53□□□□□ -1.36
CTR9-205ENST00000529898 NUDT16Q96DE0 195 aaKnown RBP6.53□□□□□ -1.36
CTR9-205ENST00000529898 MUC3BQ9H195 1237 aa6.53□□□□□ -1.36
CTR9-205ENST00000529898 SEMA6BQ9H3T3 888 aa6.53□□□□□ -1.36
CTR9-205ENST00000529898 ELP3Q9H9T3 547 aa6.53□□□□□ -1.36
CTR9-205ENST00000529898 DYRK3O43781 588 aa6.52□□□□□ -1.37
CTR9-205ENST00000529898 SCNN1AP37088 669 aa6.52□□□□□ -1.37
CTR9-205ENST00000529898 NOM1Q5C9Z4 860 aaKnown RBP6.52□□□□□ -1.37
CTR9-205ENST00000529898 TM4SF5O14894 197 aa6.51□□□□□ -1.37
CTR9-205ENST00000529898 MZF1P28698 734 aaPredicted RBP6.51□□□□□ -1.37
CTR9-205ENST00000529898 SETDB1Q15047 1291 aa6.51□□□□□ -1.37
CTR9-205ENST00000529898 ALKBH2Q6NS38 261 aa6.51□□□□□ -1.37
CTR9-205ENST00000529898 ATCAYQ86WG3 371 aa6.51□□□□□ -1.37
CTR9-205ENST00000529898 IL22RA1Q8N6P7 574 aa6.51□□□□□ -1.37
CTR9-205ENST00000529898 DCAF11Q8TEB1 546 aa6.51□□□□□ -1.37
CTR9-205ENST00000529898 WFDC12Q8WWY7 111 aa6.51□□□□□ -1.37
CTR9-205ENST00000529898 GGNBP2Q9H3C7 697 aa6.51□□□□□ -1.37
CTR9-205ENST00000529898 TMEM63CQ9P1W3 806 aa6.51□□□□□ -1.37
CTR9-205ENST00000529898 SALL4Q9UJQ4 1053 aa6.51□□□□□ -1.37
CTR9-205ENST00000529898 TRIM33Q9UPN9 1127 aa6.51□□□□□ -1.37
CTR9-205ENST00000529898 USTQ9Y2C2 406 aa6.51□□□□□ -1.37
CTR9-205ENST00000529898 PDGFAP04085 211 aa6.5□□□□□ -1.37
CTR9-205ENST00000529898 EIF1AXP47813 144 aaKnown RBP6.5□□□□□ -1.37
CTR9-205ENST00000529898 EDEM1Q92611 657 aa6.5□□□□□ -1.37
CTR9-205ENST00000529898 CNTN3Q9P232 1028 aa6.5□□□□□ -1.37
CTR9-205ENST00000529898 CYP2E1P05181 493 aaPredicted RBP6.49□□□□□ -1.37
CTR9-205ENST00000529898 MPSTP25325 297 aa6.49□□□□□ -1.37
CTR9-205ENST00000529898 NOS3P29474 1203 aa6.49□□□□□ -1.37
CTR9-205ENST00000529898 SF3B2Q13435 895 aaKnown RBP6.49□□□□□ -1.37
CTR9-205ENST00000529898 GDF6Q6KF10 455 aaPredicted RBP6.49□□□□□ -1.37
CTR9-205ENST00000529898 SPACA7Q96KW9 195 aa6.49□□□□□ -1.37
CTR9-205ENST00000529898 PBX4Q9BYU1 374 aa6.49□□□□□ -1.37
CTR9-205ENST00000529898 ADAM19Q9H013 955 aa6.49□□□□□ -1.37
CTR9-205ENST00000529898 USP21Q9UK80 565 aa6.49□□□□□ -1.37
CTR9-205ENST00000529898 PPME1Q9Y570 386 aa6.49□□□□□ -1.37
CTR9-205ENST00000529898 SMNDC1O75940 238 aaKnown RBP eCLIP6.48□□□□□ -1.37
CTR9-205ENST00000529898 FAM13AO94988 1023 aa6.48□□□□□ -1.37
CTR9-205ENST00000529898 PCSK2P16519 638 aa6.48□□□□□ -1.37
CTR9-205ENST00000529898 ATP11AP98196 1134 aa6.48□□□□□ -1.37
CTR9-205ENST00000529898 ADAMTSL4Q6UY14 1074 aa6.48□□□□□ -1.37
CTR9-205ENST00000529898 Q6ZS46 218 aa6.48□□□□□ -1.37
CTR9-205ENST00000529898 ZNF438Q7Z4V0 828 aa6.48□□□□□ -1.37
CTR9-205ENST00000529898 DZIP1LQ8IYY4 767 aaKnown RBP6.48□□□□□ -1.37
CTR9-205ENST00000529898 PMEPA1Q969W9 287 aa6.48□□□□□ -1.37
CTR9-205ENST00000529898 MRPL18Q9H0U6 180 aaKnown RBP6.48□□□□□ -1.37
CTR9-205ENST00000529898 RASSF4Q9H2L5 321 aa6.48□□□□□ -1.37
CTR9-205ENST00000529898 CHRDQ9H2X0 955 aa6.48□□□□□ -1.37
CTR9-205ENST00000529898 MTMR7Q9Y216 660 aa6.48□□□□□ -1.37
CTR9-205ENST00000529898 NFKBIEO00221 500 aa6.47□□□□□ -1.37
CTR9-205ENST00000529898 IREB2P48200 963 aaKnown RBP6.47□□□□□ -1.37
CTR9-205ENST00000529898 FKBP4Q02790 459 aaKnown RBP eCLIP6.47□□□□□ -1.37
CTR9-205ENST00000529898 DNM1Q05193 864 aaKnown RBP6.47□□□□□ -1.37
CTR9-205ENST00000529898 F8W735 103 aaPredicted RBP6.46□□□□□ -1.38
CTR9-205ENST00000529898 FZD6O60353 706 aa6.46□□□□□ -1.38
CTR9-205ENST00000529898 CDC27P30260 824 aa6.46□□□□□ -1.38
CTR9-205ENST00000529898 USP5P45974 858 aa6.46□□□□□ -1.38
CTR9-205ENST00000529898 EHHADHQ08426 723 aa6.46□□□□□ -1.38
CTR9-205ENST00000529898 XP32Q5T750 250 aa6.46□□□□□ -1.38
CTR9-205ENST00000529898 CEP135Q66GS9 1140 aa6.46□□□□□ -1.38
CTR9-205ENST00000529898 Q8N3U1 123 aa6.46□□□□□ -1.38
CTR9-205ENST00000529898 C1orf127Q8N9H9 656 aa6.46□□□□□ -1.38
CTR9-205ENST00000529898 POP1Q99575 1024 aaKnown RBP6.46□□□□□ -1.38
CTR9-205ENST00000529898 AKTIPQ9H8T0 292 aa6.46□□□□□ -1.38
CTR9-205ENST00000529898 EGFL7Q9UHF1 273 aa6.46□□□□□ -1.38
CTR9-205ENST00000529898 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.46□□□□□ -1.38
CTR9-205ENST00000529898 CARNS1A5YM72 827 aa6.45□□□□□ -1.38
CTR9-205ENST00000529898 MTMR3Q13615 1198 aa6.45□□□□□ -1.38
CTR9-205ENST00000529898 ECM1Q16610 540 aa6.45□□□□□ -1.38
CTR9-205ENST00000529898 FOXD4L6Q3SYB3 417 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms