RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 C6orf229H3BNL8 230 aa15.95■□□□□ 0.14
CCDC90B-216ENST00000529856 KIF3CO14782 793 aa15.95■□□□□ 0.14
CCDC90B-216ENST00000529856 CCDC57Q2TAC2 916 aa15.95■□□□□ 0.14
CCDC90B-216ENST00000529856 RABL6Q3YEC7 729 aaPredicted RBP15.95■□□□□ 0.14
CCDC90B-216ENST00000529856 MPHOSPH8Q99549 860 aa15.95■□□□□ 0.14
CCDC90B-216ENST00000529856 RRAGCQ9HB90 399 aa15.95■□□□□ 0.14
CCDC90B-216ENST00000529856 ANKIB1Q9P2G1 1089 aa15.95■□□□□ 0.14
CCDC90B-216ENST00000529856 TNNQ9UQP3 1299 aa15.95■□□□□ 0.14
CCDC90B-216ENST00000529856 DDNO94850 711 aaPredicted RBP15.94■□□□□ 0.14
CCDC90B-216ENST00000529856 WASHC4Q2M389 1173 aa15.94■□□□□ 0.14
CCDC90B-216ENST00000529856 NIM1KQ8IY84 436 aa15.94■□□□□ 0.14
CCDC90B-216ENST00000529856 ANKRD44Q8N8A2 993 aa15.94■□□□□ 0.14
CCDC90B-216ENST00000529856 EYA3Q99504 573 aa15.94■□□□□ 0.14
CCDC90B-216ENST00000529856 BICC1Q9H694 974 aaKnown RBP15.94■□□□□ 0.14
CCDC90B-216ENST00000529856 GGA1Q9UJY5 639 aa15.94■□□□□ 0.14
CCDC90B-216ENST00000529856 SPEF2Q9C093 1822 aa15.94■□□□□ 0.14
CCDC90B-216ENST00000529856 XDHP47989 1333 aa15.94■□□□□ 0.14
CCDC90B-216ENST00000529856 ZNF541Q9H0D2 1346 aa15.94■□□□□ 0.14
CCDC90B-216ENST00000529856 POTECB2RU33 542 aa15.93■□□□□ 0.14
CCDC90B-216ENST00000529856 ATP2B4P23634 1241 aa15.93■□□□□ 0.14
CCDC90B-216ENST00000529856 EIF6P56537 245 aaKnown RBP15.93■□□□□ 0.14
CCDC90B-216ENST00000529856 CACNB1Q02641 598 aaPredicted RBP15.93■□□□□ 0.14
CCDC90B-216ENST00000529856 RNF216Q9NWF9 866 aaPredicted RBP15.93■□□□□ 0.14
CCDC90B-216ENST00000529856 ZNRF3Q9ULT6 936 aa15.93■□□□□ 0.14
CCDC90B-216ENST00000529856 RIMBP2O15034 1052 aa15.92■□□□□ 0.14
CCDC90B-216ENST00000529856 UFL1O94874 794 aa15.92■□□□□ 0.14
CCDC90B-216ENST00000529856 UBTFL1P0CB47 393 aaPredicted RBP15.92■□□□□ 0.14
CCDC90B-216ENST00000529856 VEGFAP15692 232 aaPredicted RBP15.92■□□□□ 0.14
CCDC90B-216ENST00000529856 CLUAP1Q96AJ1 413 aa15.92■□□□□ 0.14
CCDC90B-216ENST00000529856 ZNF594Q96JF6 807 aaPredicted RBP15.92■□□□□ 0.14
CCDC90B-216ENST00000529856 WDR90Q96KV7 1748 aa15.91■□□□□ 0.14
CCDC90B-216ENST00000529856 WTIPA6NIX2 430 aaPredicted RBP15.91■□□□□ 0.14
CCDC90B-216ENST00000529856 TAF7LQ5H9L4 462 aa15.91■□□□□ 0.14
CCDC90B-216ENST00000529856 GPC2Q8N158 579 aa15.91■□□□□ 0.14
CCDC90B-216ENST00000529856 GPR101Q96P66 508 aaPredicted RBP15.91■□□□□ 0.14
CCDC90B-216ENST00000529856 MEIS3Q99687 375 aa15.91■□□□□ 0.14
CCDC90B-216ENST00000529856 ZC3H12CQ9C0D7 883 aaKnown RBP15.91■□□□□ 0.14
CCDC90B-216ENST00000529856 ANKRD2Q9GZV1 360 aa15.91■□□□□ 0.14
CCDC90B-216ENST00000529856 HDAC5Q9UQL6 1122 aa15.91■□□□□ 0.14
CCDC90B-216ENST00000529856 CHRNDQ07001 517 aa15.9■□□□□ 0.14
CCDC90B-216ENST00000529856 CXCL9Q07325 125 aa15.9■□□□□ 0.14
CCDC90B-216ENST00000529856 LDHAL6AQ6ZMR3 332 aa15.9■□□□□ 0.14
CCDC90B-216ENST00000529856 L3MBTL3Q96JM7 780 aaPredicted RBP15.9■□□□□ 0.14
CCDC90B-216ENST00000529856 LEMD3Q9Y2U8 911 aa15.9■□□□□ 0.14
CCDC90B-216ENST00000529856 YDJCA8MPS7 323 aa15.89■□□□□ 0.13
CCDC90B-216ENST00000529856 GNAI3P08754 354 aa15.89■□□□□ 0.13
CCDC90B-216ENST00000529856 TMEM57Q8N5G2 664 aa15.89■□□□□ 0.13
CCDC90B-216ENST00000529856 RCAN3Q9UKA8 241 aa15.89■□□□□ 0.13
CCDC90B-216ENST00000529856 GJA3Q9Y6H8 435 aa15.89■□□□□ 0.13
CCDC90B-216ENST00000529856 TOMM70O94826 608 aa15.88■□□□□ 0.13
CCDC90B-216ENST00000529856 C1QTNF8P60827 252 aa15.88■□□□□ 0.13
CCDC90B-216ENST00000529856 DOK7Q18PE1 504 aa15.88■□□□□ 0.13
CCDC90B-216ENST00000529856 DZIP1LQ8IYY4 767 aaKnown RBP15.88■□□□□ 0.13
CCDC90B-216ENST00000529856 DBNDD1Q9H9R9 158 aa15.88■□□□□ 0.13
CCDC90B-216ENST00000529856 CNNM1Q9NRU3 951 aa15.88■□□□□ 0.13
CCDC90B-216ENST00000529856 LRRFIP2Q9Y608 721 aaKnown RBP15.88■□□□□ 0.13
CCDC90B-216ENST00000529856 ZNF804BA4D1E1 1349 aa15.88■□□□□ 0.13
CCDC90B-216ENST00000529856 ECE2O60344 883 aa15.87■□□□□ 0.13
CCDC90B-216ENST00000529856 RLBP1P12271 317 aa15.87■□□□□ 0.13
CCDC90B-216ENST00000529856 CIAPIN1Q6FI81 312 aa15.87■□□□□ 0.13
CCDC90B-216ENST00000529856 FTSJ3Q8IY81 847 aaKnown RBP15.87■□□□□ 0.13
CCDC90B-216ENST00000529856 C16orf71Q8IYS4 520 aaPredicted RBP15.87■□□□□ 0.13
CCDC90B-216ENST00000529856 HELBQ8NG08 1087 aaPredicted RBP15.87■□□□□ 0.13
CCDC90B-216ENST00000529856 YTHDC1Q96MU7 727 aaKnown RBP15.87■□□□□ 0.13
CCDC90B-216ENST00000529856 PUS3Q9BZE2 481 aaKnown RBP15.87■□□□□ 0.13
CCDC90B-216ENST00000529856 RIPOR2Q9Y4F9 1068 aa15.87■□□□□ 0.13
CCDC90B-216ENST00000529856 MED23Q9ULK4 1368 aa15.87■□□□□ 0.13
CCDC90B-216ENST00000529856 IQCA1LA6NCM1 817 aa15.86■□□□□ 0.13
CCDC90B-216ENST00000529856 TAF5LO75529 589 aa15.86■□□□□ 0.13
CCDC90B-216ENST00000529856 RAD17O75943 681 aa15.86■□□□□ 0.13
CCDC90B-216ENST00000529856 RFX5P48382 616 aaPredicted RBP15.86■□□□□ 0.13
CCDC90B-216ENST00000529856 TNIP1Q15025 636 aa15.86■□□□□ 0.13
CCDC90B-216ENST00000529856 SCN4AP35499 1836 aa15.86■□□□□ 0.13
CCDC90B-216ENST00000529856 G3V3G9 751 aa15.85■□□□□ 0.13
CCDC90B-216ENST00000529856 LRRC24Q50LG9 513 aa15.85■□□□□ 0.13
CCDC90B-216ENST00000529856 DCAF8Q5TAQ9 597 aa15.85■□□□□ 0.13
CCDC90B-216ENST00000529856 TXNRD3Q86VQ6 643 aa15.85■□□□□ 0.13
CCDC90B-216ENST00000529856 KLHDC4Q8TBB5 520 aa15.85■□□□□ 0.13
CCDC90B-216ENST00000529856 RBM46Q8TBY0 533 aaKnown RBP15.85■□□□□ 0.13
CCDC90B-216ENST00000529856 KCNQ5Q9NR82 932 aa15.85■□□□□ 0.13
CCDC90B-216ENST00000529856 HACL1Q9UJ83 578 aa15.85■□□□□ 0.13
CCDC90B-216ENST00000529856 SNAP23O00161 211 aa15.84■□□□□ 0.13
CCDC90B-216ENST00000529856 PLIN1O60240 522 aa15.84■□□□□ 0.13
CCDC90B-216ENST00000529856 GNAI2P04899 355 aa15.84■□□□□ 0.13
CCDC90B-216ENST00000529856 MS4A1P11836 297 aa15.84■□□□□ 0.13
CCDC90B-216ENST00000529856 KCNJ4P48050 445 aa15.84■□□□□ 0.13
CCDC90B-216ENST00000529856 SCNN1DP51172 638 aa15.84■□□□□ 0.13
CCDC90B-216ENST00000529856 PTPN12Q05209 780 aaKnown RBP15.84■□□□□ 0.13
CCDC90B-216ENST00000529856 C15orf52Q6ZUT6 534 aaKnown RBP15.84■□□□□ 0.13
CCDC90B-216ENST00000529856 PODNQ7Z5L7 613 aa15.84■□□□□ 0.13
CCDC90B-216ENST00000529856 TAF1DQ9H5J8 278 aaPredicted RBP15.84■□□□□ 0.13
CCDC90B-216ENST00000529856 MROH5Q6ZUA9 1318 aa15.84■□□□□ 0.13
CCDC90B-216ENST00000529856 A0A1B0GUL6 1792 aa15.83■□□□□ 0.12
CCDC90B-216ENST00000529856 PSMD14O00487 310 aa15.83■□□□□ 0.12
CCDC90B-216ENST00000529856 ZBTB7BO15156 539 aaPredicted RBP15.83■□□□□ 0.12
CCDC90B-216ENST00000529856 KLRK1P26718 216 aa15.83■□□□□ 0.12
CCDC90B-216ENST00000529856 ITPRIPQ8IWB1 547 aa15.83■□□□□ 0.12
CCDC90B-216ENST00000529856 PANK1Q8TE04 598 aa15.83■□□□□ 0.12
CCDC90B-216ENST00000529856 COA1Q9GZY4 146 aa15.83■□□□□ 0.12
CCDC90B-216ENST00000529856 IRS2Q9Y4H2 1338 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms