RNA–Protein interactions for RNA: ENST00000529759.1

LDLRAD3-204, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-204ENST00000529759 GBA2Q9HCG7 927 aaPredicted RBP13.92□□□□□ -0.18
LDLRAD3-204ENST00000529759 SEC31BQ9NQW1 1179 aa13.92□□□□□ -0.18
LDLRAD3-204ENST00000529759 RNF186Q9NXI6 227 aa13.92□□□□□ -0.18
LDLRAD3-204ENST00000529759 C6orf229H3BNL8 230 aa13.91□□□□□ -0.18
LDLRAD3-204ENST00000529759 CHL1O00533 1208 aa13.91□□□□□ -0.18
LDLRAD3-204ENST00000529759 ECE2O60344 883 aa13.91□□□□□ -0.18
LDLRAD3-204ENST00000529759 HSP90AB3PQ58FF7 597 aa13.91□□□□□ -0.18
LDLRAD3-204ENST00000529759 MOB2Q70IA6 237 aa13.91□□□□□ -0.18
LDLRAD3-204ENST00000529759 TRIM35Q9UPQ4 493 aa13.91□□□□□ -0.18
LDLRAD3-204ENST00000529759 AKAP11Q9UKA4 1901 aa13.91□□□□□ -0.18
LDLRAD3-204ENST00000529759 SF3B3Q15393 1217 aaKnown RBP13.9□□□□□ -0.18
LDLRAD3-204ENST00000529759 TBC1D16Q8TBP0 767 aa13.9□□□□□ -0.18
LDLRAD3-204ENST00000529759 LAS1LQ9Y4W2 734 aaKnown RBP13.9□□□□□ -0.18
LDLRAD3-204ENST00000529759 HOXB7P09629 217 aa13.89□□□□□ -0.19
LDLRAD3-204ENST00000529759 ZNF157P51786 506 aaPredicted RBP13.89□□□□□ -0.19
LDLRAD3-204ENST00000529759 GGA3Q9NZ52 723 aa13.89□□□□□ -0.19
LDLRAD3-204ENST00000529759 VIL1P09327 827 aaKnown RBP13.88□□□□□ -0.19
LDLRAD3-204ENST00000529759 HDGFL1Q5TGJ6 251 aa13.88□□□□□ -0.19
LDLRAD3-204ENST00000529759 PRAMEF18Q5VWM3 479 aa13.88□□□□□ -0.19
LDLRAD3-204ENST00000529759 ANKRD13DQ6ZTN6 518 aa13.88□□□□□ -0.19
LDLRAD3-204ENST00000529759 C2orf69Q8N8R5 385 aa13.88□□□□□ -0.19
LDLRAD3-204ENST00000529759 PLBD2Q8NHP8 589 aa13.88□□□□□ -0.19
LDLRAD3-204ENST00000529759 CDCA5Q96FF9 252 aa13.88□□□□□ -0.19
LDLRAD3-204ENST00000529759 IRS4O14654 1257 aaPredicted RBP13.87□□□□□ -0.19
LDLRAD3-204ENST00000529759 SLC10A3P09131 477 aa13.87□□□□□ -0.19
LDLRAD3-204ENST00000529759 RPS8P62241 208 aaKnown RBP13.87□□□□□ -0.19
LDLRAD3-204ENST00000529759 KIF4BQ2VIQ3 1234 aa13.87□□□□□ -0.19
LDLRAD3-204ENST00000529759 DCPSQ96C86 337 aaKnown RBP13.87□□□□□ -0.19
LDLRAD3-204ENST00000529759 CCDC85AQ96PX6 553 aaPredicted RBP13.87□□□□□ -0.19
LDLRAD3-204ENST00000529759 ADAMTS8Q9UP79 889 aa13.87□□□□□ -0.19
LDLRAD3-204ENST00000529759 SCARF1Q14162 830 aa13.86□□□□□ -0.19
LDLRAD3-204ENST00000529759 RASAL3Q86YV0 1011 aa13.86□□□□□ -0.19
LDLRAD3-204ENST00000529759 GMLQ99445 158 aa13.86□□□□□ -0.19
LDLRAD3-204ENST00000529759 MXD3Q9BW11 206 aa13.86□□□□□ -0.19
LDLRAD3-204ENST00000529759 PHAXQ9H814 394 aaKnown RBP13.86□□□□□ -0.19
LDLRAD3-204ENST00000529759 PRKRIP1Q9H875 184 aaPredicted RBP13.86□□□□□ -0.19
LDLRAD3-204ENST00000529759 DBF4Q9UBU7 674 aaPredicted RBP13.86□□□□□ -0.19
LDLRAD3-204ENST00000529759 ANGEL2Q5VTE6 544 aaKnown RBP13.85□□□□□ -0.19
LDLRAD3-204ENST00000529759 TMC4Q7Z404 712 aa13.85□□□□□ -0.19
LDLRAD3-204ENST00000529759 R3HDMLQ9H3Y0 253 aa13.85□□□□□ -0.19
LDLRAD3-204ENST00000529759 UBE2Q2LH0YL09 131 aa13.84□□□□□ -0.19
LDLRAD3-204ENST00000529759 UFL1O94874 794 aa13.84□□□□□ -0.19
LDLRAD3-204ENST00000529759 RPS12P25398 132 aaKnown RBP13.84□□□□□ -0.19
LDLRAD3-204ENST00000529759 ZNF280AP59817 542 aaPredicted RBP13.84□□□□□ -0.19
LDLRAD3-204ENST00000529759 CCDC102AQ96A19 550 aa13.84□□□□□ -0.19
LDLRAD3-204ENST00000529759 SAGE1Q9NXZ1 904 aa13.84□□□□□ -0.19
LDLRAD3-204ENST00000529759 ZNF646O15015 1829 aaPredicted RBP13.84□□□□□ -0.19
LDLRAD3-204ENST00000529759 PSME4Q14997 1843 aa13.84□□□□□ -0.19
LDLRAD3-204ENST00000529759 TBC1D8O95759 1140 aa13.83□□□□□ -0.2
LDLRAD3-204ENST00000529759 TRIM28Q13263 835 aaKnown RBP13.83□□□□□ -0.2
LDLRAD3-204ENST00000529759 DUSP27Q5VZP5 1158 aa13.83□□□□□ -0.2
LDLRAD3-204ENST00000529759 ZC3H12CQ9C0D7 883 aaKnown RBP13.83□□□□□ -0.2
LDLRAD3-204ENST00000529759 MBIPQ9NS73 344 aa13.83□□□□□ -0.2
LDLRAD3-204ENST00000529759 HYPKQ9NX55 129 aa13.83□□□□□ -0.2
LDLRAD3-204ENST00000529759 PODXL2Q9NZ53 605 aa13.83□□□□□ -0.2
LDLRAD3-204ENST00000529759 MYH3P11055 1940 aa13.82□□□□□ -0.2
LDLRAD3-204ENST00000529759 ELL2O00472 640 aaPredicted RBP13.82□□□□□ -0.2
LDLRAD3-204ENST00000529759 ZNF853P0CG23 659 aa13.82□□□□□ -0.2
LDLRAD3-204ENST00000529759 CALD1Q05682 793 aaKnown RBP13.82□□□□□ -0.2
LDLRAD3-204ENST00000529759 NBPF9Q3BBW0 867 aa13.82□□□□□ -0.2
LDLRAD3-204ENST00000529759 RSBN1LQ6PCB5 846 aaPredicted RBP13.82□□□□□ -0.2
LDLRAD3-204ENST00000529759 SULF1Q8IWU6 871 aa13.82□□□□□ -0.2
LDLRAD3-204ENST00000529759 IFT57Q9NWB7 429 aa13.82□□□□□ -0.2
LDLRAD3-204ENST00000529759 MKI67P46013 3256 aaKnown RBP13.81□□□□□ -0.2
LDLRAD3-204ENST00000529759 MKRN3Q13064 507 aaKnown RBP13.81□□□□□ -0.2
LDLRAD3-204ENST00000529759 ZBTB38Q8NAP3 1195 aaPredicted RBP13.81□□□□□ -0.2
LDLRAD3-204ENST00000529759 EYA3Q99504 573 aa13.81□□□□□ -0.2
LDLRAD3-204ENST00000529759 MYD88Q99836 296 aa13.81□□□□□ -0.2
LDLRAD3-204ENST00000529759 ANKIB1Q9P2G1 1089 aa13.81□□□□□ -0.2
LDLRAD3-204ENST00000529759 FZD1Q9UP38 647 aa13.81□□□□□ -0.2
LDLRAD3-204ENST00000529759 HPS5Q9UPZ3 1129 aa13.81□□□□□ -0.2
LDLRAD3-204ENST00000529759 SPEF2Q9C093 1822 aa13.8□□□□□ -0.2
LDLRAD3-204ENST00000529759 APAF1O14727 1248 aa13.8□□□□□ -0.2
LDLRAD3-204ENST00000529759 GNAI1P63096 354 aa13.8□□□□□ -0.2
LDLRAD3-204ENST00000529759 CTU1Q7Z7A3 348 aaKnown RBP13.8□□□□□ -0.2
LDLRAD3-204ENST00000529759 TXNRD3Q86VQ6 643 aa13.8□□□□□ -0.2
LDLRAD3-204ENST00000529759 ZNF296Q8WUU4 475 aaPredicted RBP13.8□□□□□ -0.2
LDLRAD3-204ENST00000529759 MYOZ2Q9NPC6 264 aa13.8□□□□□ -0.2
LDLRAD3-204ENST00000529759 GGA1Q9UJY5 639 aa13.8□□□□□ -0.2
LDLRAD3-204ENST00000529759 HTTP42858 3142 aa13.79□□□□□ -0.2
LDLRAD3-204ENST00000529759 GOLGA2Q08379 1002 aa13.79□□□□□ -0.2
LDLRAD3-204ENST00000529759 PAPPA2Q9BXP8 1791 aa13.78□□□□□ -0.2
LDLRAD3-204ENST00000529759 USP17L8P0C7I0 530 aa13.78□□□□□ -0.2
LDLRAD3-204ENST00000529759 KLRK1P26718 216 aa13.78□□□□□ -0.2
LDLRAD3-204ENST00000529759 RIC3Q7Z5B4 369 aa13.78□□□□□ -0.2
LDLRAD3-204ENST00000529759 C8orf58Q8NAV2 365 aa13.78□□□□□ -0.2
LDLRAD3-204ENST00000529759 AGBL3Q8NEM8 1001 aa13.78□□□□□ -0.2
LDLRAD3-204ENST00000529759 CENPFP49454 3210 aa13.77□□□□□ -0.2
LDLRAD3-204ENST00000529759 G3V3G9 751 aa13.77□□□□□ -0.21
LDLRAD3-204ENST00000529759 ZNF609O15014 1411 aa13.77□□□□□ -0.21
LDLRAD3-204ENST00000529759 PCCAP05165 728 aaPredicted RBP13.77□□□□□ -0.21
LDLRAD3-204ENST00000529759 PRKG1Q13976 671 aa13.77□□□□□ -0.21
LDLRAD3-204ENST00000529759 DCAF8Q5TAQ9 597 aa13.77□□□□□ -0.21
LDLRAD3-204ENST00000529759 PCDH10Q9P2E7 1040 aa13.77□□□□□ -0.21
LDLRAD3-204ENST00000529759 CACNA1FO60840 1977 aa13.76□□□□□ -0.21
LDLRAD3-204ENST00000529759 USP17L3A6NCW0 530 aa13.76□□□□□ -0.21
LDLRAD3-204ENST00000529759 USP17L4A6NCW7 530 aa13.76□□□□□ -0.21
LDLRAD3-204ENST00000529759 WNT10BO00744 389 aa13.76□□□□□ -0.21
LDLRAD3-204ENST00000529759 PDE8AO60658 829 aa13.76□□□□□ -0.21
LDLRAD3-204ENST00000529759 IGKV5-2P06315 115 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms