RNA–Protein interactions for RNA: ENST00000529670.5

LRP8-212, Transcript of LDL receptor related protein 8, humanhuman

TSL 5

Gene LRP8, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-212ENST00000529670 GRIPAP1Q4V328 841 aa6.62□□□□□ -1.35
LRP8-212ENST00000529670 PRPF40BQ6NWY9 871 aaKnown RBP6.62□□□□□ -1.35
LRP8-212ENST00000529670 PNMA8AQ86V59 439 aaPredicted RBP6.62□□□□□ -1.35
LRP8-212ENST00000529670 RTKN2Q8IZC4 609 aa6.62□□□□□ -1.35
LRP8-212ENST00000529670 AIDAQ96BJ3 306 aa6.62□□□□□ -1.35
LRP8-212ENST00000529670 PRR14Q9BWN1 585 aa6.62□□□□□ -1.35
LRP8-212ENST00000529670 TMEM134Q9H6X4 195 aa6.62□□□□□ -1.35
LRP8-212ENST00000529670 ANKRD31Q8N7Z5 1873 aa6.62□□□□□ -1.35
LRP8-212ENST00000529670 ARFGEF2Q9Y6D5 1785 aa6.62□□□□□ -1.35
LRP8-212ENST00000529670 PASKQ96RG2 1323 aa6.61□□□□□ -1.35
LRP8-212ENST00000529670 RCCD1A6NED2 376 aa6.61□□□□□ -1.35
LRP8-212ENST00000529670 TMEM88BA6NKF7 163 aa6.61□□□□□ -1.35
LRP8-212ENST00000529670 GPR37O15354 613 aa6.61□□□□□ -1.35
LRP8-212ENST00000529670 PER1O15534 1290 aaPredicted RBP6.61□□□□□ -1.35
LRP8-212ENST00000529670 ALDH1B1P30837 517 aa6.61□□□□□ -1.35
LRP8-212ENST00000529670 FKBP4Q02790 459 aaKnown RBP eCLIP6.61□□□□□ -1.35
LRP8-212ENST00000529670 CC2D2BQ6DHV5 1058 aa6.61□□□□□ -1.35
LRP8-212ENST00000529670 TPTE2Q6XPS3 522 aa6.61□□□□□ -1.35
LRP8-212ENST00000529670 NBPF5PQ86XG9 351 aaPredicted RBP6.61□□□□□ -1.35
LRP8-212ENST00000529670 DZIP3Q86Y13 1208 aaKnown RBP6.61□□□□□ -1.35
LRP8-212ENST00000529670 IL17REQ8NFR9 667 aa6.61□□□□□ -1.35
LRP8-212ENST00000529670 CFAP53Q96M91 514 aa6.61□□□□□ -1.35
LRP8-212ENST00000529670 TAF1DQ9H5J8 278 aaPredicted RBP6.61□□□□□ -1.35
LRP8-212ENST00000529670 HACL1Q9UJ83 578 aa6.61□□□□□ -1.35
LRP8-212ENST00000529670 TBC1D2BQ9UPU7 963 aa6.61□□□□□ -1.35
LRP8-212ENST00000529670 NUDCQ9Y266 331 aa6.61□□□□□ -1.35
LRP8-212ENST00000529670 SIPA1L3O60292 1781 aaPredicted RBP6.6□□□□□ -1.35
LRP8-212ENST00000529670 KIF7Q2M1P5 1343 aa6.6□□□□□ -1.35
LRP8-212ENST00000529670 COL11A2P13942 1736 aaPredicted RBP6.6□□□□□ -1.35
LRP8-212ENST00000529670 BTBD11A6QL63 1104 aa6.6□□□□□ -1.35
LRP8-212ENST00000529670 U2SURPO15042 1029 aaKnown RBP6.6□□□□□ -1.35
LRP8-212ENST00000529670 HTATSF1O43719 755 aaKnown RBP6.6□□□□□ -1.35
LRP8-212ENST00000529670 DDNO94850 711 aaPredicted RBP6.6□□□□□ -1.35
LRP8-212ENST00000529670 SNRPA1P09661 255 aaKnown RBP6.6□□□□□ -1.35
LRP8-212ENST00000529670 KCNC4Q03721 635 aa6.6□□□□□ -1.35
LRP8-212ENST00000529670 FAM161AQ3B820 660 aa6.6□□□□□ -1.35
LRP8-212ENST00000529670 METTL3Q86U44 580 aaKnown RBP6.6□□□□□ -1.35
LRP8-212ENST00000529670 PXYLP1Q8TE99 480 aa6.6□□□□□ -1.35
LRP8-212ENST00000529670 C7orf43Q8WVR3 580 aa6.6□□□□□ -1.35
LRP8-212ENST00000529670 ZNF330Q9Y3S2 320 aaPredicted RBP6.6□□□□□ -1.35
LRP8-212ENST00000529670 COL3A1P02461 1466 aaPredicted RBP6.6□□□□□ -1.35
LRP8-212ENST00000529670 BCORQ6W2J9 1755 aa6.59□□□□□ -1.35
LRP8-212ENST00000529670 RASSF10A6NK89 507 aa6.59□□□□□ -1.35
LRP8-212ENST00000529670 A1BGP04217 495 aa6.59□□□□□ -1.35
LRP8-212ENST00000529670 MAP2K1Q02750 393 aaPredicted RBP6.59□□□□□ -1.35
LRP8-212ENST00000529670 DIEXFQ68CQ4 756 aaKnown RBP6.59□□□□□ -1.35
LRP8-212ENST00000529670 GPC2Q8N158 579 aa6.59□□□□□ -1.35
LRP8-212ENST00000529670 JDP2Q8WYK2 163 aa6.59□□□□□ -1.35
LRP8-212ENST00000529670 RTF1Q92541 710 aaKnown RBP6.59□□□□□ -1.35
LRP8-212ENST00000529670 NYXQ9GZU5 481 aa6.59□□□□□ -1.35
LRP8-212ENST00000529670 MKRN1Q9UHC7 482 aaKnown RBP6.59□□□□□ -1.35
LRP8-212ENST00000529670 SLX4Q8IY92 1834 aa6.59□□□□□ -1.35
LRP8-212ENST00000529670 RIC1Q4ADV7 1423 aa6.59□□□□□ -1.36
LRP8-212ENST00000529670 PCNTO95613 3336 aa6.58□□□□□ -1.36
LRP8-212ENST00000529670 FZD9O00144 591 aa6.58□□□□□ -1.36
LRP8-212ENST00000529670 FOXN1O15353 648 aa6.58□□□□□ -1.36
LRP8-212ENST00000529670 GTF2E1P29083 439 aaPredicted RBP6.58□□□□□ -1.36
LRP8-212ENST00000529670 EPHX2P34913 555 aa6.58□□□□□ -1.36
LRP8-212ENST00000529670 VEGFBP49765 207 aa6.58□□□□□ -1.36
LRP8-212ENST00000529670 CC2D1BQ5T0F9 858 aaKnown RBP6.58□□□□□ -1.36
LRP8-212ENST00000529670 PSMD1Q99460 953 aa6.58□□□□□ -1.36
LRP8-212ENST00000529670 IBTKQ9P2D0 1353 aaPredicted RBP6.57□□□□□ -1.36
LRP8-212ENST00000529670 ERVV-1B6SEH8 477 aa6.57□□□□□ -1.36
LRP8-212ENST00000529670 NEFMP07197 916 aa6.57□□□□□ -1.36
LRP8-212ENST00000529670 FECHP22830 423 aa6.57□□□□□ -1.36
LRP8-212ENST00000529670 LMOD1P29536 600 aaPredicted RBP6.57□□□□□ -1.36
LRP8-212ENST00000529670 PRKAR2BP31323 418 aa6.57□□□□□ -1.36
LRP8-212ENST00000529670 IARSP41252 1262 aaKnown RBP6.57□□□□□ -1.36
LRP8-212ENST00000529670 ECE1P42892 770 aa6.57□□□□□ -1.36
LRP8-212ENST00000529670 EIF6P56537 245 aaKnown RBP6.57□□□□□ -1.36
LRP8-212ENST00000529670 DEFB115Q30KQ5 88 aa6.57□□□□□ -1.36
LRP8-212ENST00000529670 KMT5BQ4FZB7 885 aa6.57□□□□□ -1.36
LRP8-212ENST00000529670 EAPPQ56P03 285 aaPredicted RBP6.57□□□□□ -1.36
LRP8-212ENST00000529670 CNTROBQ8N137 903 aa6.57□□□□□ -1.36
LRP8-212ENST00000529670 CCDC24Q8N4L8 307 aa6.57□□□□□ -1.36
LRP8-212ENST00000529670 PNISRQ8TF01 805 aaKnown RBP6.57□□□□□ -1.36
LRP8-212ENST00000529670 BEGAINQ9BUH8 593 aa6.57□□□□□ -1.36
LRP8-212ENST00000529670 RSPH6AQ9H0K4 717 aa6.57□□□□□ -1.36
LRP8-212ENST00000529670 VPS33BQ9H267 617 aa6.57□□□□□ -1.36
LRP8-212ENST00000529670 NIP7Q9Y221 180 aaKnown RBP eCLIP6.57□□□□□ -1.36
LRP8-212ENST00000529670 USP16Q9Y5T5 823 aa6.57□□□□□ -1.36
LRP8-212ENST00000529670 ADAMTSL1Q8N6G6 1762 aa6.57□□□□□ -1.36
LRP8-212ENST00000529670 HOXA10P31260 410 aaPredicted RBP6.56□□□□□ -1.36
LRP8-212ENST00000529670 MAP2K5Q13163 448 aa6.56□□□□□ -1.36
LRP8-212ENST00000529670 TAF7Q15545 349 aaPredicted RBP6.56□□□□□ -1.36
LRP8-212ENST00000529670 CRY2Q49AN0 593 aa6.56□□□□□ -1.36
LRP8-212ENST00000529670 USP50Q70EL3 339 aaPredicted RBP6.56□□□□□ -1.36
LRP8-212ENST00000529670 SYNE4Q8N205 404 aa6.56□□□□□ -1.36
LRP8-212ENST00000529670 TMX4Q9H1E5 349 aaPredicted RBP6.56□□□□□ -1.36
LRP8-212ENST00000529670 IL21Q9HBE4 155 aa6.56□□□□□ -1.36
LRP8-212ENST00000529670 ZNF277Q9NRM2 450 aaPredicted RBP6.56□□□□□ -1.36
LRP8-212ENST00000529670 WDR33Q9C0J8 1336 aaKnown RBP6.55□□□□□ -1.36
LRP8-212ENST00000529670 ZNF541Q9H0D2 1346 aa6.55□□□□□ -1.36
LRP8-212ENST00000529670 KCNQ3O43525 872 aa6.55□□□□□ -1.36
LRP8-212ENST00000529670 CA12O43570 354 aa6.55□□□□□ -1.36
LRP8-212ENST00000529670 RGS20O76081 388 aa6.55□□□□□ -1.36
LRP8-212ENST00000529670 U2AF1L5P0DN76 240 aaPredicted RBP6.55□□□□□ -1.36
LRP8-212ENST00000529670 U2AF1Q01081 240 aaKnown RBP eCLIP6.55□□□□□ -1.36
LRP8-212ENST00000529670 NBPF10Q6P3W6 841 aaKnown RBP6.55□□□□□ -1.36
LRP8-212ENST00000529670 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms