RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 KSR2Q6VAB6 950 aa9.3□□□□□ -0.92
CTNND1-220ENST00000529526 HOOK3Q86VS8 718 aa9.3□□□□□ -0.92
CTNND1-220ENST00000529526 AKAP4Q5JQC9 854 aa9.3□□□□□ -0.92
CTNND1-220ENST00000529526 URB2Q14146 1524 aaKnown RBP9.3□□□□□ -0.92
CTNND1-220ENST00000529526 F13A1P00488 732 aa9.3□□□□□ -0.92
CTNND1-220ENST00000529526 C8orf34Q49A92 452 aa9.3□□□□□ -0.92
CTNND1-220ENST00000529526 MIGA1Q8NAN2 632 aa9.3□□□□□ -0.92
CTNND1-220ENST00000529526 ZBTB9Q96C00 473 aa9.3□□□□□ -0.92
CTNND1-220ENST00000529526 SETDB2Q96T68 719 aa9.3□□□□□ -0.92
CTNND1-220ENST00000529526 NIP7Q9Y221 180 aaKnown RBP eCLIP9.3□□□□□ -0.92
CTNND1-220ENST00000529526 NAA16Q6N069 864 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-220ENST00000529526 HELBQ8NG08 1087 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-220ENST00000529526 ESR2Q92731 530 aa9.3□□□□□ -0.92
CTNND1-220ENST00000529526 DACT1Q9NYF0 836 aa9.3□□□□□ -0.92
CTNND1-220ENST00000529526 RLBP1P12271 317 aa9.29□□□□□ -0.92
CTNND1-220ENST00000529526 RXRAP19793 462 aa9.29□□□□□ -0.92
CTNND1-220ENST00000529526 APOBRQ0VD83 1088 aa9.29□□□□□ -0.92
CTNND1-220ENST00000529526 TFCP2Q12800 502 aa9.29□□□□□ -0.92
CTNND1-220ENST00000529526 DHX58Q96C10 678 aa9.29□□□□□ -0.92
CTNND1-220ENST00000529526 PYM1Q9BRP8 204 aaKnown RBP9.29□□□□□ -0.92
CTNND1-220ENST00000529526 NAA15Q9BXJ9 866 aaKnown RBP9.29□□□□□ -0.92
CTNND1-220ENST00000529526 WWC3Q9ULE0 1092 aa9.29□□□□□ -0.92
CTNND1-220ENST00000529526 JAG2Q9Y219 1238 aa9.29□□□□□ -0.92
CTNND1-220ENST00000529526 TTC21AQ8NDW8 1320 aa9.29□□□□□ -0.92
CTNND1-220ENST00000529526 PTPRKQ15262 1439 aa9.29□□□□□ -0.92
CTNND1-220ENST00000529526 PTGS1P23219 599 aa9.29□□□□□ -0.92
CTNND1-220ENST00000529526 HMGB2P26583 209 aaKnown RBP9.29□□□□□ -0.92
CTNND1-220ENST00000529526 STXBP4Q6ZWJ1 553 aa9.29□□□□□ -0.92
CTNND1-220ENST00000529526 NFATC2IPQ8NCF5 419 aa9.29□□□□□ -0.92
CTNND1-220ENST00000529526 SMARCC1Q92922 1105 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-220ENST00000529526 RMND1Q9NWS8 449 aa9.29□□□□□ -0.92
CTNND1-220ENST00000529526 MAGEB6P1A0A0J9YX57 407 aa9.29□□□□□ -0.92
CTNND1-220ENST00000529526 MRPS27Q92552 414 aaKnown RBP9.29□□□□□ -0.92
CTNND1-220ENST00000529526 ZFYP08048 801 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-220ENST00000529526 AK2P54819 239 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 NAPAP54920 295 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 CEP85Q6P2H3 762 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 MAGEB6Q8N7X4 407 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 RGS22Q8NE09 1264 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 KCNG4Q8TDN1 519 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 CNNM2Q9H8M5 875 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 POLKQ9UBT6 870 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 POTEB2H3BUK9 544 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 RAPGEF6Q8TEU7 1601 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 SYCP2Q9BX26 1530 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 IL15P40933 162 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-220ENST00000529526 CCDC186Q7Z3E2 898 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 SIRT1Q96EB6 747 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 UTP14AQ9BVJ6 771 aaKnown RBP9.28□□□□□ -0.92
CTNND1-220ENST00000529526 FAM107BQ9H098 131 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 TAOK3Q9H2K8 898 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 INCENPQ9NQS7 918 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 RTL1A6NKG5 1358 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 MAPKBP1O60336 1514 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 AKR1B10O60218 316 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 ALDH1L1O75891 902 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 CALM1P0DP23 149 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 CALM2P0DP24 149 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 CALM3P0DP25 149 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 TERF1P54274 439 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 SMC1AQ14683 1233 aaKnown RBP9.28□□□□□ -0.92
CTNND1-220ENST00000529526 GOLGA6L9A6NEM1 432 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 NBPF7P0C2Y1 421 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-220ENST00000529526 SKILP12757 684 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 CADPS2Q86UW7 1296 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 ZGPATQ8N5A5 531 aaKnown RBP9.28□□□□□ -0.92
CTNND1-220ENST00000529526 PSMD1Q99460 953 aa9.28□□□□□ -0.92
CTNND1-220ENST00000529526 LMAN1P49257 510 aa9.27□□□□□ -0.92
CTNND1-220ENST00000529526 ASIC1P78348 528 aa9.27□□□□□ -0.92
CTNND1-220ENST00000529526 DZIP3Q86Y13 1208 aaKnown RBP9.27□□□□□ -0.92
CTNND1-220ENST00000529526 LRRC27Q9C0I9 530 aa9.27□□□□□ -0.92
CTNND1-220ENST00000529526 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.27□□□□□ -0.924e-9■□□□□ 9.9
CTNND1-220ENST00000529526 MSH6P52701 1360 aa9.27□□□□□ -0.92
CTNND1-220ENST00000529526 RIMS2Q9UQ26 1411 aa9.27□□□□□ -0.93
CTNND1-220ENST00000529526 CCDC174Q6PII3 467 aa9.27□□□□□ -0.93
CTNND1-220ENST00000529526 PRAG1Q86YV5 1406 aa9.27□□□□□ -0.93
CTNND1-220ENST00000529526 RNF113AO15541 343 aaKnown RBP9.27□□□□□ -0.93
CTNND1-220ENST00000529526 ARID5AQ03989 594 aa9.27□□□□□ -0.93
CTNND1-220ENST00000529526 CREB3L3Q68CJ9 461 aa9.27□□□□□ -0.93
CTNND1-220ENST00000529526 DNAI1Q9UI46 699 aa9.27□□□□□ -0.93
CTNND1-220ENST00000529526 ERMNQ8TAM6 284 aa9.27□□□□□ -0.93
CTNND1-220ENST00000529526 PLIN2Q99541 437 aa9.27□□□□□ -0.93
CTNND1-220ENST00000529526 BICC1Q9H694 974 aaKnown RBP9.27□□□□□ -0.93
CTNND1-220ENST00000529526 NCKAP5LQ9HCH0 1330 aa9.27□□□□□ -0.93
CTNND1-220ENST00000529526 PPM1FP49593 454 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-220ENST00000529526 TICAM2Q86XR7 235 aa9.27□□□□□ -0.93
CTNND1-220ENST00000529526 TTC16Q8NEE8 873 aa9.27□□□□□ -0.93
CTNND1-220ENST00000529526 TBC1D5Q92609 795 aa9.27□□□□□ -0.93
CTNND1-220ENST00000529526 PHACTR3Q96KR7 559 aa9.27□□□□□ -0.93
CTNND1-220ENST00000529526 DUOX2Q9NRD8 1548 aa9.26□□□□□ -0.93
CTNND1-220ENST00000529526 MCM7P33993 719 aa9.26□□□□□ -0.93
CTNND1-220ENST00000529526 PRIM1P49642 420 aaKnown RBP9.26□□□□□ -0.93
CTNND1-220ENST00000529526 GIMAP7Q8NHV1 300 aa9.26□□□□□ -0.93
CTNND1-220ENST00000529526 NLRP3Q96P20 1036 aa9.26□□□□□ -0.93
CTNND1-220ENST00000529526 ZKSCAN3Q9BRR0 538 aa9.26□□□□□ -0.93
CTNND1-220ENST00000529526 PAXBP1Q9Y5B6 917 aa9.26□□□□□ -0.93
CTNND1-220ENST00000529526 TMEM110-MUSTN1A8MSY1 372 aa9.26□□□□□ -0.93
CTNND1-220ENST00000529526 WDHD1O75717 1129 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-220ENST00000529526 STX17P56962 302 aa9.26□□□□□ -0.93
CTNND1-220ENST00000529526 TMTC2Q8N394 836 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms