RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 DPF2Q92785 391 aa8.1□□□□□ -1.11
CHRNA6-202ENST00000529467 ZIC5Q96T25 663 aa8.1□□□□□ -1.11
CHRNA6-202ENST00000529467 PSMD14O00487 310 aa8.09□□□□□ -1.11
CHRNA6-202ENST00000529467 MLLT1Q03111 559 aaPredicted RBP8.09□□□□□ -1.11
CHRNA6-202ENST00000529467 LMOD3Q0VAK6 560 aa8.09□□□□□ -1.11
CHRNA6-202ENST00000529467 WASHC4Q2M389 1173 aa8.09□□□□□ -1.11
CHRNA6-202ENST00000529467 ANKRD13DQ6ZTN6 518 aa8.09□□□□□ -1.11
CHRNA6-202ENST00000529467 SAMD7Q7Z3H4 446 aa8.09□□□□□ -1.11
CHRNA6-202ENST00000529467 MICALL2Q8IY33 904 aa8.09□□□□□ -1.11
CHRNA6-202ENST00000529467 MIER1Q8N108 512 aa8.09□□□□□ -1.11
CHRNA6-202ENST00000529467 CELF1Q92879 486 aaKnown RBP8.09□□□□□ -1.11
CHRNA6-202ENST00000529467 ZNF428Q96B54 188 aa8.09□□□□□ -1.11
CHRNA6-202ENST00000529467 ISCA1Q9BUE6 129 aa8.09□□□□□ -1.11
CHRNA6-202ENST00000529467 MCOLN1Q9GZU1 580 aa8.09□□□□□ -1.11
CHRNA6-202ENST00000529467 ZNF408Q9H9D4 720 aa8.09□□□□□ -1.11
CHRNA6-202ENST00000529467 KCNQ5Q9NR82 932 aa8.09□□□□□ -1.11
CHRNA6-202ENST00000529467 POLLQ9UGP5 575 aa8.09□□□□□ -1.11
CHRNA6-202ENST00000529467 DUOX1Q9NRD9 1551 aa8.09□□□□□ -1.11
CHRNA6-202ENST00000529467 DDX60Q8IY21 1712 aaKnown RBP8.09□□□□□ -1.11
CHRNA6-202ENST00000529467 SLC34A2O95436 690 aa8.08□□□□□ -1.12
CHRNA6-202ENST00000529467 EGFRP00533 1210 aa8.08□□□□□ -1.12
CHRNA6-202ENST00000529467 HUNKP57058 714 aa8.08□□□□□ -1.12
CHRNA6-202ENST00000529467 NOGQ13253 232 aa8.08□□□□□ -1.12
CHRNA6-202ENST00000529467 RALBP1Q15311 655 aa8.08□□□□□ -1.12
CHRNA6-202ENST00000529467 PLBD2Q8NHP8 589 aa8.08□□□□□ -1.12
CHRNA6-202ENST00000529467 FAM89AQ96GI7 184 aa8.08□□□□□ -1.12
CHRNA6-202ENST00000529467 DBNDD1Q9H9R9 158 aa8.08□□□□□ -1.12
CHRNA6-202ENST00000529467 CHPF2Q9P2E5 772 aa8.08□□□□□ -1.12
CHRNA6-202ENST00000529467 NSFL1CQ9UNZ2 370 aaKnown RBP8.08□□□□□ -1.12
CHRNA6-202ENST00000529467 TRIM35Q9UPQ4 493 aa8.08□□□□□ -1.12
CHRNA6-202ENST00000529467 LRRC37AA6NMS7 1700 aa8.08□□□□□ -1.12
CHRNA6-202ENST00000529467 FAM155AB1AL88 458 aaPredicted RBP8.07□□□□□ -1.12
CHRNA6-202ENST00000529467 ATP5J2-PTCD1G3V325 749 aa8.07□□□□□ -1.12
CHRNA6-202ENST00000529467 C6orf229H3BNL8 230 aa8.07□□□□□ -1.12
CHRNA6-202ENST00000529467 RIMBP2O15034 1052 aa8.07□□□□□ -1.12
CHRNA6-202ENST00000529467 RPS12P25398 132 aaKnown RBP8.07□□□□□ -1.12
CHRNA6-202ENST00000529467 MNX1P50219 401 aaPredicted RBP8.07□□□□□ -1.12
CHRNA6-202ENST00000529467 RPS8P62241 208 aaKnown RBP8.07□□□□□ -1.12
CHRNA6-202ENST00000529467 GPSM2P81274 684 aa8.07□□□□□ -1.12
CHRNA6-202ENST00000529467 TRIM28Q13263 835 aaKnown RBP8.07□□□□□ -1.12
CHRNA6-202ENST00000529467 NEUROD2Q15784 382 aa8.07□□□□□ -1.12
CHRNA6-202ENST00000529467 TBC1D10BQ4KMP7 808 aaPredicted RBP8.07□□□□□ -1.12
CHRNA6-202ENST00000529467 RBM26Q5T8P6 1007 aaKnown RBP8.07□□□□□ -1.12
CHRNA6-202ENST00000529467 LHX8Q68G74 356 aa8.07□□□□□ -1.12
CHRNA6-202ENST00000529467 RGMBQ6NW40 437 aa8.07□□□□□ -1.12
CHRNA6-202ENST00000529467 SCN9AQ15858 1988 aa8.07□□□□□ -1.12
CHRNA6-202ENST00000529467 COL4A1P02462 1669 aa8.07□□□□□ -1.12
CHRNA6-202ENST00000529467 RTL9Q8NET4 1388 aa8.07□□□□□ -1.12
CHRNA6-202ENST00000529467 AKAP11Q9UKA4 1901 aa8.06□□□□□ -1.12
CHRNA6-202ENST00000529467 ECE2O60344 883 aa8.06□□□□□ -1.12
CHRNA6-202ENST00000529467 VIL1P09327 827 aaKnown RBP8.06□□□□□ -1.12
CHRNA6-202ENST00000529467 HOXB7P09629 217 aa8.06□□□□□ -1.12
CHRNA6-202ENST00000529467 DGKZQ13574 1117 aa8.06□□□□□ -1.12
CHRNA6-202ENST00000529467 DOK7Q18PE1 504 aa8.06□□□□□ -1.12
CHRNA6-202ENST00000529467 RTL5Q5HYW3 569 aaPredicted RBP8.06□□□□□ -1.12
CHRNA6-202ENST00000529467 HDGFL1Q5TGJ6 251 aa8.06□□□□□ -1.12
CHRNA6-202ENST00000529467 KRT26Q7Z3Y9 468 aa8.06□□□□□ -1.12
CHRNA6-202ENST00000529467 CCDC146Q8IYE0 955 aa8.06□□□□□ -1.12
CHRNA6-202ENST00000529467 C2orf69Q8N8R5 385 aa8.06□□□□□ -1.12
CHRNA6-202ENST00000529467 TBC1D16Q8TBP0 767 aa8.06□□□□□ -1.12
CHRNA6-202ENST00000529467 DCPSQ96C86 337 aaKnown RBP8.06□□□□□ -1.12
CHRNA6-202ENST00000529467 EYA3Q99504 573 aa8.06□□□□□ -1.12
CHRNA6-202ENST00000529467 GBA2Q9HCG7 927 aaPredicted RBP8.06□□□□□ -1.12
CHRNA6-202ENST00000529467 PODXL2Q9NZ53 605 aa8.06□□□□□ -1.12
CHRNA6-202ENST00000529467 DBF4Q9UBU7 674 aaPredicted RBP8.06□□□□□ -1.12
CHRNA6-202ENST00000529467 LAS1LQ9Y4W2 734 aaKnown RBP8.06□□□□□ -1.12
CHRNA6-202ENST00000529467 ADM5C9JUS6 153 aa8.05□□□□□ -1.12
CHRNA6-202ENST00000529467 IRS4O14654 1257 aaPredicted RBP8.05□□□□□ -1.12
CHRNA6-202ENST00000529467 CENPBP07199 599 aaPredicted RBP8.05□□□□□ -1.12
CHRNA6-202ENST00000529467 KIF23Q02241 960 aaPredicted RBP8.05□□□□□ -1.12
CHRNA6-202ENST00000529467 DUSP27Q5VZP5 1158 aa8.05□□□□□ -1.12
CHRNA6-202ENST00000529467 CCDC102AQ96A19 550 aa8.05□□□□□ -1.12
CHRNA6-202ENST00000529467 RUNDC1Q96C34 613 aa8.05□□□□□ -1.12
CHRNA6-202ENST00000529467 CFAP44Q96MT7 982 aa8.05□□□□□ -1.12
CHRNA6-202ENST00000529467 ZC3H12CQ9C0D7 883 aaKnown RBP8.05□□□□□ -1.12
CHRNA6-202ENST00000529467 HYPKQ9NX55 129 aa8.05□□□□□ -1.12
CHRNA6-202ENST00000529467 ZNF157P51786 506 aaPredicted RBP8.04□□□□□ -1.12
CHRNA6-202ENST00000529467 KIF4BQ2VIQ3 1234 aa8.04□□□□□ -1.12
CHRNA6-202ENST00000529467 ZBTB38Q8NAP3 1195 aaPredicted RBP8.04□□□□□ -1.12
CHRNA6-202ENST00000529467 CSRNP1Q96S65 589 aa8.04□□□□□ -1.12
CHRNA6-202ENST00000529467 SEC31BQ9NQW1 1179 aa8.04□□□□□ -1.12
CHRNA6-202ENST00000529467 RNF186Q9NXI6 227 aa8.04□□□□□ -1.12
CHRNA6-202ENST00000529467 SAGE1Q9NXZ1 904 aa8.04□□□□□ -1.12
CHRNA6-202ENST00000529467 ADAMTS8Q9UP79 889 aa8.04□□□□□ -1.12
CHRNA6-202ENST00000529467 ASTN2O75129 1339 aaPredicted RBP8.03□□□□□ -1.12
CHRNA6-202ENST00000529467 TRPA1O75762 1119 aa8.03□□□□□ -1.12
CHRNA6-202ENST00000529467 SLC10A3P09131 477 aa8.03□□□□□ -1.12
CHRNA6-202ENST00000529467 ZNF853P0CG23 659 aa8.03□□□□□ -1.12
CHRNA6-202ENST00000529467 ZNF280AP59817 542 aaPredicted RBP8.03□□□□□ -1.12
CHRNA6-202ENST00000529467 RIC3Q7Z5B4 369 aa8.03□□□□□ -1.12
CHRNA6-202ENST00000529467 AGBL3Q8NEM8 1001 aa8.03□□□□□ -1.12
CHRNA6-202ENST00000529467 GMLQ99445 158 aa8.03□□□□□ -1.12
CHRNA6-202ENST00000529467 PHAXQ9H814 394 aaKnown RBP8.03□□□□□ -1.12
CHRNA6-202ENST00000529467 PRKRIP1Q9H875 184 aaPredicted RBP8.03□□□□□ -1.12
CHRNA6-202ENST00000529467 MBIPQ9NS73 344 aa8.03□□□□□ -1.12
CHRNA6-202ENST00000529467 PSME4Q14997 1843 aa8.03□□□□□ -1.12
CHRNA6-202ENST00000529467 PDE8AO60658 829 aa8.02□□□□□ -1.13
CHRNA6-202ENST00000529467 UFL1O94874 794 aa8.02□□□□□ -1.13
CHRNA6-202ENST00000529467 PCCAP05165 728 aaPredicted RBP8.02□□□□□ -1.13
CHRNA6-202ENST00000529467 SCARF1Q14162 830 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms