RNA–Protein interactions for RNA: ENST00000529173.5

RPS3-212, Transcript of ribosomal protein S3, humanhuman

TSL 5

Gene RPS3, Length 1,373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-212ENST00000529173 FOXD4L1Q9NU39 408 aa15.88■□□□□ 0.13
RPS3-212ENST00000529173 MROH5Q6ZUA9 1318 aa15.88■□□□□ 0.13
RPS3-212ENST00000529173 RPAP1Q9BWH6 1393 aaPredicted RBP15.88■□□□□ 0.13
RPS3-212ENST00000529173 CASTP20810 708 aaKnown RBP15.87■□□□□ 0.13
RPS3-212ENST00000529173 HMGB2P26583 209 aaKnown RBP15.87■□□□□ 0.13
RPS3-212ENST00000529173 SSFA2P28290 1259 aa15.87■□□□□ 0.13
RPS3-212ENST00000529173 ATP2B3Q16720 1220 aa15.87■□□□□ 0.13
RPS3-212ENST00000529173 USPL1Q5W0Q7 1092 aa15.87■□□□□ 0.13
RPS3-212ENST00000529173 ZSCAN25Q6NSZ9 544 aa15.87■□□□□ 0.13
RPS3-212ENST00000529173 LDHAL6AQ6ZMR3 332 aa15.87■□□□□ 0.13
RPS3-212ENST00000529173 JAKMIP1Q96N16 626 aaKnown RBP15.87■□□□□ 0.13
RPS3-212ENST00000529173 UPF3BQ9BZI7 483 aaKnown RBP15.87■□□□□ 0.13
RPS3-212ENST00000529173 ALDH8A1Q9H2A2 487 aaPredicted RBP15.87■□□□□ 0.13
RPS3-212ENST00000529173 TBC1D2BQ9UPU7 963 aa15.87■□□□□ 0.13
RPS3-212ENST00000529173 RIC1Q4ADV7 1423 aa15.87■□□□□ 0.13
RPS3-212ENST00000529173 TRAK2O60296 914 aa15.87■□□□□ 0.13
RPS3-212ENST00000529173 PTH1RQ03431 593 aa15.87■□□□□ 0.13
RPS3-212ENST00000529173 TTF1Q15361 905 aaPredicted RBP15.87■□□□□ 0.13
RPS3-212ENST00000529173 CCDC152Q4G0S7 254 aa15.87■□□□□ 0.13
RPS3-212ENST00000529173 L1TD1Q5T7N2 865 aaKnown RBP15.87■□□□□ 0.13
RPS3-212ENST00000529173 RUFY3Q7L099 469 aa15.87■□□□□ 0.13
RPS3-212ENST00000529173 ZNF594Q96JF6 807 aaPredicted RBP15.87■□□□□ 0.13
RPS3-212ENST00000529173 PDRG1Q9NUG6 133 aa15.87■□□□□ 0.13
RPS3-212ENST00000529173 USP21Q9UK80 565 aa15.87■□□□□ 0.13
RPS3-212ENST00000529173 SCN7AQ01118 1682 aa15.86■□□□□ 0.13
RPS3-212ENST00000529173 ARAP2Q8WZ64 1704 aa15.86■□□□□ 0.13
RPS3-212ENST00000529173 GOLIM4O00461 696 aa15.86■□□□□ 0.13
RPS3-212ENST00000529173 SLC27A2O14975 620 aa15.86■□□□□ 0.13
RPS3-212ENST00000529173 TAF5LO75529 589 aa15.86■□□□□ 0.13
RPS3-212ENST00000529173 CAMTA2O94983 1202 aa15.86■□□□□ 0.13
RPS3-212ENST00000529173 HMGB1P09429 215 aaKnown RBP15.86■□□□□ 0.13
RPS3-212ENST00000529173 UQCRFS1P1P0C7P4 283 aa15.86■□□□□ 0.13
RPS3-212ENST00000529173 RC3H1Q5TC82 1133 aaKnown RBP15.86■□□□□ 0.13
RPS3-212ENST00000529173 BLOC1S2Q6QNY1 142 aa15.86■□□□□ 0.13
RPS3-212ENST00000529173 CHMP4CQ96CF2 233 aa15.86■□□□□ 0.13
RPS3-212ENST00000529173 DSCC1Q9BVC3 393 aa15.86■□□□□ 0.13
RPS3-212ENST00000529173 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.86■□□□□ 0.132e-11■□□□□ 9.4
RPS3-212ENST00000529173 UBN2Q6ZU65 1347 aa15.86■□□□□ 0.13
RPS3-212ENST00000529173 RNF113AO15541 343 aaKnown RBP15.85■□□□□ 0.13
RPS3-212ENST00000529173 AK2P54819 239 aa15.85■□□□□ 0.13
RPS3-212ENST00000529173 ITPK1Q13572 414 aa15.85■□□□□ 0.13
RPS3-212ENST00000529173 ZMYM1Q5SVZ6 1142 aa15.85■□□□□ 0.13
RPS3-212ENST00000529173 DDX46Q7L014 1031 aaKnown RBP15.85■□□□□ 0.13
RPS3-212ENST00000529173 XAGE2Q96GT9 111 aa15.85■□□□□ 0.13
RPS3-212ENST00000529173 GREM2Q9H772 168 aa15.85■□□□□ 0.13
RPS3-212ENST00000529173 RIPOR2Q9Y4F9 1068 aa15.85■□□□□ 0.13
RPS3-212ENST00000529173 WDR33Q9C0J8 1336 aaKnown RBP15.85■□□□□ 0.13
RPS3-212ENST00000529173 BAG4O95429 457 aaKnown RBP15.84■□□□□ 0.13
RPS3-212ENST00000529173 TIMM10P62072 90 aa15.84■□□□□ 0.13
RPS3-212ENST00000529173 PUM3Q15397 648 aaKnown RBP15.84■□□□□ 0.13
RPS3-212ENST00000529173 MEX3CQ5U5Q3 659 aaKnown RBP15.84■□□□□ 0.13
RPS3-212ENST00000529173 RASEFQ8IZ41 740 aa15.84■□□□□ 0.13
RPS3-212ENST00000529173 PUS3Q9BZE2 481 aaKnown RBP15.84■□□□□ 0.13
RPS3-212ENST00000529173 PDE8BO95263 885 aa15.83■□□□□ 0.12
RPS3-212ENST00000529173 IGHMBP2P38935 993 aaKnown RBP15.83■□□□□ 0.12
RPS3-212ENST00000529173 ZGPATQ8N5A5 531 aaKnown RBP15.83■□□□□ 0.12
RPS3-212ENST00000529173 CDC5LQ99459 802 aaKnown RBP15.83■□□□□ 0.12
RPS3-212ENST00000529173 CTNNA3Q9UI47 895 aa15.83■□□□□ 0.12
RPS3-212ENST00000529173 NIP7Q9Y221 180 aaKnown RBP eCLIP15.83■□□□□ 0.129e-40■■■■□ 25.2
RPS3-212ENST00000529173 ATP6V1DQ9Y5K8 247 aa15.83■□□□□ 0.12
RPS3-212ENST00000529173 BTAF1O14981 1849 aa15.82■□□□□ 0.12
RPS3-212ENST00000529173 SLC5A1P13866 664 aa15.82■□□□□ 0.12
RPS3-212ENST00000529173 LPIN2Q92539 896 aa15.82■□□□□ 0.12
RPS3-212ENST00000529173 MPHOSPH8Q99549 860 aa15.82■□□□□ 0.12
RPS3-212ENST00000529173 NYXQ9GZU5 481 aa15.82■□□□□ 0.12
RPS3-212ENST00000529173 SMC3Q9UQE7 1217 aa15.82■□□□□ 0.12
RPS3-212ENST00000529173 DDX60Q8IY21 1712 aaKnown RBP15.82■□□□□ 0.12
RPS3-212ENST00000529173 MYH14Q7Z406 1995 aaKnown RBP15.82■□□□□ 0.12
RPS3-212ENST00000529173 MYH7P12883 1935 aa15.81■□□□□ 0.12
RPS3-212ENST00000529173 NTSR2O95665 410 aa15.81■□□□□ 0.12
RPS3-212ENST00000529173 BRD1O95696 1058 aa15.81■□□□□ 0.12
RPS3-212ENST00000529173 RPS6KB1P23443 525 aa15.81■□□□□ 0.12
RPS3-212ENST00000529173 SUSD4Q5VX71 490 aa15.81■□□□□ 0.12
RPS3-212ENST00000529173 ZNF589Q86UQ0 364 aaPredicted RBP15.81■□□□□ 0.12
RPS3-212ENST00000529173 PDCP20941 246 aa15.8■□□□□ 0.12
RPS3-212ENST00000529173 VGLL2Q8N8G2 317 aa15.8■□□□□ 0.12
RPS3-212ENST00000529173 CERKQ8TCT0 537 aa15.8■□□□□ 0.12
RPS3-212ENST00000529173 APPBP2Q92624 585 aa15.8■□□□□ 0.12
RPS3-212ENST00000529173 EDC3Q96F86 508 aaKnown RBP15.8■□□□□ 0.12
RPS3-212ENST00000529173 ARID4AP29374 1257 aaPredicted RBP15.79■□□□□ 0.12
RPS3-212ENST00000529173 FKBP4Q02790 459 aaKnown RBP eCLIP15.79■□□□□ 0.12
RPS3-212ENST00000529173 KLHL40Q2TBA0 621 aa15.79■□□□□ 0.12
RPS3-212ENST00000529173 NOL8Q76FK4 1167 aaKnown RBP15.79■□□□□ 0.12
RPS3-212ENST00000529173 CCDC85AQ96PX6 553 aaPredicted RBP15.79■□□□□ 0.12
RPS3-212ENST00000529173 NEK1Q96PY6 1258 aa15.79■□□□□ 0.12
RPS3-212ENST00000529173 TRPC5Q9UL62 973 aaPredicted RBP15.79■□□□□ 0.12
RPS3-212ENST00000529173 ATRNO75882 1429 aa15.79■□□□□ 0.12
RPS3-212ENST00000529173 MBD3O95983 291 aa15.78■□□□□ 0.12
RPS3-212ENST00000529173 CSPP1Q1MSJ5 1256 aa15.78■□□□□ 0.12
RPS3-212ENST00000529173 GJD4Q96KN9 370 aaPredicted RBP15.78■□□□□ 0.12
RPS3-212ENST00000529173 LY75O60449 1722 aa15.78■□□□□ 0.12
RPS3-212ENST00000529173 MAST3O60307 1309 aa15.78■□□□□ 0.12
RPS3-212ENST00000529173 KCNQ2O43526 872 aa15.77■□□□□ 0.12
RPS3-212ENST00000529173 RPS6KA4O75676 772 aa15.77■□□□□ 0.12
RPS3-212ENST00000529173 ADORA1P30542 326 aa15.77■□□□□ 0.12
RPS3-212ENST00000529173 ADCK5Q3MIX3 580 aa15.77■□□□□ 0.12
RPS3-212ENST00000529173 LINC00116Q8NCU8 138 aa15.77■□□□□ 0.12
RPS3-212ENST00000529173 COL24A1Q17RW2 1714 aa15.77■□□□□ 0.12
RPS3-212ENST00000529173 GOLGA6L3A6NEY3 463 aa15.76■□□□□ 0.11
RPS3-212ENST00000529173 FGFR2P21802 821 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms