RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 EIF6P56537 245 aaKnown RBP21.24■□□□□ 0.99
HIF3A-211ENST00000528563 GPC2Q8N158 579 aa21.24■□□□□ 0.99
HIF3A-211ENST00000528563 LTBP1Q14766 1721 aa21.24■□□□□ 0.99
HIF3A-211ENST00000528563 IFIT5Q13325 482 aaKnown RBP21.23■□□□□ 0.99
HIF3A-211ENST00000528563 XDHP47989 1333 aa21.23■□□□□ 0.99
HIF3A-211ENST00000528563 IPO8O15397 1037 aaKnown RBP21.22■□□□□ 0.99
HIF3A-211ENST00000528563 EYA3Q99504 573 aa21.22■□□□□ 0.99
HIF3A-211ENST00000528563 GGA1Q9UJY5 639 aa21.22■□□□□ 0.99
HIF3A-211ENST00000528563 WTIPA6NIX2 430 aaPredicted RBP21.21■□□□□ 0.99
HIF3A-211ENST00000528563 CXCL9Q07325 125 aa21.21■□□□□ 0.99
HIF3A-211ENST00000528563 C16orf71Q8IYS4 520 aaPredicted RBP21.21■□□□□ 0.99
HIF3A-211ENST00000528563 RBM46Q8TBY0 533 aaKnown RBP21.21■□□□□ 0.99
HIF3A-211ENST00000528563 MPHOSPH8Q99549 860 aa21.21■□□□□ 0.99
HIF3A-211ENST00000528563 RIMBP2O15034 1052 aa21.2■□□□□ 0.98
HIF3A-211ENST00000528563 UFL1O94874 794 aa21.2■□□□□ 0.98
HIF3A-211ENST00000528563 CCDC57Q2TAC2 916 aa21.2■□□□□ 0.98
HIF3A-211ENST00000528563 RABL6Q3YEC7 729 aaPredicted RBP21.2■□□□□ 0.98
HIF3A-211ENST00000528563 INTS3Q68E01 1043 aaKnown RBP21.2■□□□□ 0.98
HIF3A-211ENST00000528563 GPR101Q96P66 508 aaPredicted RBP21.2■□□□□ 0.98
HIF3A-211ENST00000528563 ZC3H12CQ9C0D7 883 aaKnown RBP21.2■□□□□ 0.98
HIF3A-211ENST00000528563 CHMP3Q9Y3E7 222 aa21.2■□□□□ 0.98
HIF3A-211ENST00000528563 YDJCA8MPS7 323 aa21.2■□□□□ 0.98
HIF3A-211ENST00000528563 ATP2B4P23634 1241 aa21.2■□□□□ 0.98
HIF3A-211ENST00000528563 ANKRD44Q8N8A2 993 aa21.2■□□□□ 0.98
HIF3A-211ENST00000528563 BICC1Q9H694 974 aaKnown RBP21.2■□□□□ 0.98
HIF3A-211ENST00000528563 IQCA1LA6NCM1 817 aa21.19■□□□□ 0.98
HIF3A-211ENST00000528563 TRIM27P14373 513 aa21.19■□□□□ 0.98
HIF3A-211ENST00000528563 ATF7IPQ6VMQ6 1270 aa21.19■□□□□ 0.98
HIF3A-211ENST00000528563 FRAT1Q92837 279 aaPredicted RBP21.19■□□□□ 0.98
HIF3A-211ENST00000528563 GJA3Q9Y6H8 435 aa21.19■□□□□ 0.98
HIF3A-211ENST00000528563 ZNF594Q96JF6 807 aaPredicted RBP21.18■□□□□ 0.98
HIF3A-211ENST00000528563 ANKRD2Q9GZV1 360 aa21.18■□□□□ 0.98
HIF3A-211ENST00000528563 DOK7Q18PE1 504 aa21.17■□□□□ 0.98
HIF3A-211ENST00000528563 TAF1DQ9H5J8 278 aaPredicted RBP21.17■□□□□ 0.98
HIF3A-211ENST00000528563 DBNDD1Q9H9R9 158 aa21.17■□□□□ 0.98
HIF3A-211ENST00000528563 LEMD3Q9Y2U8 911 aa21.17■□□□□ 0.98
HIF3A-211ENST00000528563 RAD17O75943 681 aa21.16■□□□□ 0.98
HIF3A-211ENST00000528563 CHRNDQ07001 517 aa21.16■□□□□ 0.98
HIF3A-211ENST00000528563 TNIP1Q15025 636 aa21.16■□□□□ 0.98
HIF3A-211ENST00000528563 CIAPIN1Q6FI81 312 aa21.16■□□□□ 0.98
HIF3A-211ENST00000528563 LDHAL6AQ6ZMR3 332 aa21.16■□□□□ 0.98
HIF3A-211ENST00000528563 HACL1Q9UJ83 578 aa21.16■□□□□ 0.98
HIF3A-211ENST00000528563 TNNQ9UQP3 1299 aa21.16■□□□□ 0.98
HIF3A-211ENST00000528563 SCN4AP35499 1836 aa21.15■□□□□ 0.98
HIF3A-211ENST00000528563 SPEF2Q9C093 1822 aa21.15■□□□□ 0.98
HIF3A-211ENST00000528563 FSTL1Q12841 308 aa21.15■□□□□ 0.98
HIF3A-211ENST00000528563 ZKSCAN2Q63HK3 967 aa21.15■□□□□ 0.98
HIF3A-211ENST00000528563 KCNQ5Q9NR82 932 aa21.15■□□□□ 0.98
HIF3A-211ENST00000528563 ECE2O60344 883 aa21.14■□□□□ 0.98
HIF3A-211ENST00000528563 UBTFL1P0CB47 393 aaPredicted RBP21.14■□□□□ 0.98
HIF3A-211ENST00000528563 SCNN1DP51172 638 aa21.14■□□□□ 0.98
HIF3A-211ENST00000528563 TAF7LQ5H9L4 462 aa21.13■□□□□ 0.97
HIF3A-211ENST00000528563 SMC1BQ8NDV3 1235 aa21.13■□□□□ 0.97
HIF3A-211ENST00000528563 CLUAP1Q96AJ1 413 aa21.13■□□□□ 0.97
HIF3A-211ENST00000528563 ZNF804BA4D1E1 1349 aa21.13■□□□□ 0.97
HIF3A-211ENST00000528563 EPHX2P34913 555 aa21.13■□□□□ 0.97
HIF3A-211ENST00000528563 EPS15P42566 896 aa21.13■□□□□ 0.97
HIF3A-211ENST00000528563 TXNRD3Q86VQ6 643 aa21.13■□□□□ 0.97
HIF3A-211ENST00000528563 HELBQ8NG08 1087 aaPredicted RBP21.13■□□□□ 0.97
HIF3A-211ENST00000528563 MEIS3Q99687 375 aa21.13■□□□□ 0.97
HIF3A-211ENST00000528563 PUS3Q9BZE2 481 aaKnown RBP21.13■□□□□ 0.97
HIF3A-211ENST00000528563 HDAC5Q9UQL6 1122 aa21.13■□□□□ 0.97
HIF3A-211ENST00000528563 RIPOR2Q9Y4F9 1068 aa21.13■□□□□ 0.97
HIF3A-211ENST00000528563 MED23Q9ULK4 1368 aa21.12■□□□□ 0.97
HIF3A-211ENST00000528563 G3V3G9 751 aa21.12■□□□□ 0.97
HIF3A-211ENST00000528563 TAF5LO75529 589 aa21.12■□□□□ 0.97
HIF3A-211ENST00000528563 POTEIP0CG38 1075 aa21.12■□□□□ 0.97
HIF3A-211ENST00000528563 POTEJP0CG39 1038 aa21.12■□□□□ 0.97
HIF3A-211ENST00000528563 DCAF8Q5TAQ9 597 aa21.12■□□□□ 0.97
HIF3A-211ENST00000528563 CNNM1Q9NRU3 951 aa21.12■□□□□ 0.97
HIF3A-211ENST00000528563 GPRC5DQ9NZD1 345 aa21.12■□□□□ 0.97
HIF3A-211ENST00000528563 PSMD14O00487 310 aa21.11■□□□□ 0.97
HIF3A-211ENST00000528563 LMOD1P29536 600 aaPredicted RBP21.11■□□□□ 0.97
HIF3A-211ENST00000528563 GMPSP49915 693 aaPredicted RBP21.11■□□□□ 0.97
HIF3A-211ENST00000528563 PODNQ7Z5L7 613 aa21.11■□□□□ 0.97
HIF3A-211ENST00000528563 PNMA8AQ86V59 439 aaPredicted RBP21.11■□□□□ 0.97
HIF3A-211ENST00000528563 SNAP23O00161 211 aa21.1■□□□□ 0.97
HIF3A-211ENST00000528563 HSPA6P17066 643 aa21.1■□□□□ 0.97
HIF3A-211ENST00000528563 GNAI3P08754 354 aa21.09■□□□□ 0.97
HIF3A-211ENST00000528563 VIL1P09327 827 aaKnown RBP21.09■□□□□ 0.97
HIF3A-211ENST00000528563 RFX5P48382 616 aaPredicted RBP21.09■□□□□ 0.97
HIF3A-211ENST00000528563 CHADLQ6NUI6 762 aa21.09■□□□□ 0.97
HIF3A-211ENST00000528563 C15orf52Q6ZUT6 534 aaKnown RBP21.09■□□□□ 0.97
HIF3A-211ENST00000528563 LRRFIP2Q9Y608 721 aaKnown RBP21.09■□□□□ 0.97
HIF3A-211ENST00000528563 IRS2Q9Y4H2 1338 aa21.09■□□□□ 0.97
HIF3A-211ENST00000528563 KLRK1P26718 216 aa21.08■□□□□ 0.97
HIF3A-211ENST00000528563 KCNJ4P48050 445 aa21.08■□□□□ 0.97
HIF3A-211ENST00000528563 LDHDQ86WU2 507 aa21.08■□□□□ 0.97
HIF3A-211ENST00000528563 TMEM57Q8N5G2 664 aa21.08■□□□□ 0.97
HIF3A-211ENST00000528563 DPF2Q92785 391 aa21.08■□□□□ 0.97
HIF3A-211ENST00000528563 COA1Q9GZY4 146 aa21.08■□□□□ 0.97
HIF3A-211ENST00000528563 ZBTB12Q9Y330 459 aaPredicted RBP21.08■□□□□ 0.97
HIF3A-211ENST00000528563 SCN9AQ15858 1988 aa21.08■□□□□ 0.96
HIF3A-211ENST00000528563 PLIN1O60240 522 aa21.07■□□□□ 0.96
HIF3A-211ENST00000528563 LRRC24Q50LG9 513 aa21.07■□□□□ 0.96
HIF3A-211ENST00000528563 EAPPQ56P03 285 aaPredicted RBP21.07■□□□□ 0.96
HIF3A-211ENST00000528563 KLHDC4Q8TBB5 520 aa21.07■□□□□ 0.96
HIF3A-211ENST00000528563 CNOT7Q9UIV1 285 aaKnown RBP21.07■□□□□ 0.96
HIF3A-211ENST00000528563 PTPN12Q05209 780 aaKnown RBP21.07■□□□□ 0.96
HIF3A-211ENST00000528563 DZIP1LQ8IYY4 767 aaKnown RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms