RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	DBNDD1	Q9H9R9	158 aa		14.92	□□□□□ -0.02
PSMC3-205	ENST00000528362	BSDC1	Q9NW68	430 aa	Predicted RBP	14.92	□□□□□ -0.02
PSMC3-205	ENST00000528362	GGA1	Q9UJY5	639 aa		14.92	□□□□□ -0.02
PSMC3-205	ENST00000528362	TAF1	P21675	1872 aa		14.92	□□□□□ -0.02
PSMC3-205	ENST00000528362	PTPRC	P08575	1304 aa		14.92	□□□□□ -0.02
PSMC3-205	ENST00000528362	XDH	P47989	1333 aa		14.92	□□□□□ -0.02
PSMC3-205	ENST00000528362	LMOD1	P29536	600 aa	Predicted RBP	14.91	□□□□□ -0.02
PSMC3-205	ENST00000528362	GMPS	P49915	693 aa	Predicted RBP	14.91	□□□□□ -0.02
PSMC3-205	ENST00000528362	ALDH1L2	Q3SY69	923 aa		14.91	□□□□□ -0.02
PSMC3-205	ENST00000528362	EAPP	Q56P03	285 aa	Predicted RBP	14.91	□□□□□ -0.02
PSMC3-205	ENST00000528362	CIAPIN1	Q6FI81	312 aa		14.91	□□□□□ -0.02
PSMC3-205	ENST00000528362	DNAJC5G	Q8N7S2	189 aa		14.91	□□□□□ -0.02
PSMC3-205	ENST00000528362	SMC4	Q9NTJ3	1288 aa		14.91	□□□□□ -0.02
PSMC3-205	ENST00000528362	MINPP1	Q9UNW1	487 aa		14.91	□□□□□ -0.02
PSMC3-205	ENST00000528362	LTBP1	Q14766	1721 aa		14.91	□□□□□ -0.02
PSMC3-205	ENST00000528362	WTIP	A6NIX2	430 aa	Predicted RBP	14.9	□□□□□ -0.02
PSMC3-205	ENST00000528362	ECE2	O60344	883 aa		14.9	□□□□□ -0.02
PSMC3-205	ENST00000528362	CT47B1	P0C2W7	299 aa	Predicted RBP	14.9	□□□□□ -0.02
PSMC3-205	ENST00000528362	DOK7	Q18PE1	504 aa		14.9	□□□□□ -0.02
PSMC3-205	ENST00000528362	EPHA10	Q5JZY3	1008 aa		14.9	□□□□□ -0.02
PSMC3-205	ENST00000528362	PNMA8A	Q86V59	439 aa	Predicted RBP	14.9	□□□□□ -0.02
PSMC3-205	ENST00000528362	ATP2B4	P23634	1241 aa		14.89	□□□□□ -0.03
PSMC3-205	ENST00000528362	IGHMBP2	P38935	993 aa	Known RBP	14.89	□□□□□ -0.03
PSMC3-205	ENST00000528362	TNIP1	Q15025	636 aa		14.89	□□□□□ -0.03
PSMC3-205	ENST00000528362	ZC3H12C	Q9C0D7	883 aa	Known RBP	14.89	□□□□□ -0.03
PSMC3-205	ENST00000528362	KCNQ5	Q9NR82	932 aa		14.89	□□□□□ -0.03
PSMC3-205	ENST00000528362	C9orf78	Q9NZ63	289 aa	Predicted RBP	14.89	□□□□□ -0.03
PSMC3-205	ENST00000528362	GPRC5D	Q9NZD1	345 aa		14.89	□□□□□ -0.03
PSMC3-205	ENST00000528362	PSMD14	O00487	310 aa		14.88	□□□□□ -0.03
PSMC3-205	ENST00000528362	NBPF7	P0C2Y1	421 aa	Predicted RBP	14.88	□□□□□ -0.03
PSMC3-205	ENST00000528362	LMBR1L	Q6UX01	489 aa		14.88	□□□□□ -0.03
PSMC3-205	ENST00000528362	KAZALD1	Q96I82	304 aa		14.88	□□□□□ -0.03
PSMC3-205	ENST00000528362	SUCLG2	Q96I99	432 aa		14.88	□□□□□ -0.03
PSMC3-205	ENST00000528362	UTY	O14607	1347 aa		14.88	□□□□□ -0.03
PSMC3-205	ENST00000528362	ANKRD18B	A2A2Z9	1011 aa		14.87	□□□□□ -0.03
PSMC3-205	ENST00000528362	CCT4	P50991	539 aa	Known RBP	14.87	□□□□□ -0.03
PSMC3-205	ENST00000528362	ADARB2	Q9NS39	739 aa	Known RBP	14.87	□□□□□ -0.03
PSMC3-205	ENST00000528362	CHMP3	Q9Y3E7	222 aa		14.87	□□□□□ -0.03
PSMC3-205	ENST00000528362	PASK	Q96RG2	1323 aa		14.87	□□□□□ -0.03
PSMC3-205	ENST00000528362	SHTN1	A0MZ66	631 aa		14.86	□□□□□ -0.03
PSMC3-205	ENST00000528362	ITGBL1	O95965	494 aa	Predicted RBP	14.86	□□□□□ -0.03
PSMC3-205	ENST00000528362	RARS	P54136	660 aa	Known RBP	14.86	□□□□□ -0.03
PSMC3-205	ENST00000528362	BRPF1	P55201	1214 aa	Predicted RBP	14.86	□□□□□ -0.03
PSMC3-205	ENST00000528362	HNRNPU	Q00839	825 aa	Known RBP eCLIP	14.86	□□□□□ -0.03
PSMC3-205	ENST00000528362	IFIT5	Q13325	482 aa	Known RBP	14.86	□□□□□ -0.03
PSMC3-205	ENST00000528362	MAP1S	Q66K74	1059 aa	Predicted RBP	14.86	□□□□□ -0.03
PSMC3-205	ENST00000528362	USP50	Q70EL3	339 aa	Predicted RBP	14.86	□□□□□ -0.03
PSMC3-205	ENST00000528362	MPHOSPH8	Q99549	860 aa		14.86	□□□□□ -0.03
PSMC3-205	ENST00000528362	CLEC11A	Q9Y240	323 aa		14.86	□□□□□ -0.03
PSMC3-205	ENST00000528362	ZBTB12	Q9Y330	459 aa	Predicted RBP	14.86	□□□□□ -0.03
PSMC3-205	ENST00000528362	SCN4A	P35499	1836 aa		14.86	□□□□□ -0.03
PSMC3-205	ENST00000528362	MED23	Q9ULK4	1368 aa		14.85	□□□□□ -0.03
PSMC3-205	ENST00000528362	ADAMTSL1	Q8N6G6	1762 aa		14.85	□□□□□ -0.03
PSMC3-205	ENST00000528362	CACNA1F	O60840	1977 aa		14.85	□□□□□ -0.03
PSMC3-205	ENST00000528362	CHRND	Q07001	517 aa		14.85	□□□□□ -0.03
PSMC3-205	ENST00000528362	CNTROB	Q8N137	903 aa		14.85	□□□□□ -0.03
PSMC3-205	ENST00000528362	TRPM4	Q8TD43	1214 aa		14.85	□□□□□ -0.03
PSMC3-205	ENST00000528362	NOB1	Q9ULX3	412 aa	Known RBP	14.85	□□□□□ -0.03
PSMC3-205	ENST00000528362	VIL1	P09327	827 aa	Known RBP	14.84	□□□□□ -0.03
PSMC3-205	ENST00000528362	KLRK1	P26718	216 aa		14.84	□□□□□ -0.03
PSMC3-205	ENST00000528362	CCDC57	Q2TAC2	916 aa		14.84	□□□□□ -0.03
PSMC3-205	ENST00000528362	TXNRD3	Q86VQ6	643 aa		14.84	□□□□□ -0.03
PSMC3-205	ENST00000528362	MICALL2	Q8IY33	904 aa		14.84	□□□□□ -0.03
PSMC3-205	ENST00000528362	DPF2	Q92785	391 aa		14.84	□□□□□ -0.03
PSMC3-205	ENST00000528362	ZNF594	Q96JF6	807 aa	Predicted RBP	14.84	□□□□□ -0.03
PSMC3-205	ENST00000528362	ANKRD2	Q9GZV1	360 aa		14.84	□□□□□ -0.03
PSMC3-205	ENST00000528362	USP44	Q9H0E7	712 aa		14.84	□□□□□ -0.03
PSMC3-205	ENST00000528362	LEMD3	Q9Y2U8	911 aa		14.84	□□□□□ -0.03
PSMC3-205	ENST00000528362		G3V3G9	751 aa		14.83	□□□□□ -0.04
PSMC3-205	ENST00000528362	RPS12	P25398	132 aa	Known RBP	14.83	□□□□□ -0.04
PSMC3-205	ENST00000528362	HIRA	P54198	1017 aa	Predicted RBP	14.83	□□□□□ -0.04
PSMC3-205	ENST00000528362	RABL6	Q3YEC7	729 aa	Predicted RBP	14.83	□□□□□ -0.04
PSMC3-205	ENST00000528362	DCAF8	Q5TAQ9	597 aa		14.83	□□□□□ -0.04
PSMC3-205	ENST00000528362	ANKRD44	Q8N8A2	993 aa		14.83	□□□□□ -0.04
PSMC3-205	ENST00000528362	KLRG1	Q96E93	195 aa		14.83	□□□□□ -0.04
PSMC3-205	ENST00000528362	BICC1	Q9H694	974 aa	Known RBP	14.83	□□□□□ -0.04
PSMC3-205	ENST00000528362	CNOT7	Q9UIV1	285 aa	Known RBP	14.83	□□□□□ -0.04
PSMC3-205	ENST00000528362	ZNF804B	A4D1E1	1349 aa		14.83	□□□□□ -0.04
PSMC3-205	ENST00000528362	SNAP23	O00161	211 aa		14.82	□□□□□ -0.04
PSMC3-205	ENST00000528362	TAF7L	Q5H9L4	462 aa		14.82	□□□□□ -0.04
PSMC3-205	ENST00000528362	PODN	Q7Z5L7	613 aa		14.82	□□□□□ -0.04
PSMC3-205	ENST00000528362	HELB	Q8NG08	1087 aa	Predicted RBP	14.82	□□□□□ -0.04
PSMC3-205	ENST00000528362	API5	Q9BZZ5	524 aa	Known RBP	14.82	□□□□□ -0.04
PSMC3-205	ENST00000528362	CREBZF	Q9NS37	354 aa		14.82	□□□□□ -0.04
PSMC3-205	ENST00000528362		H7C1D1	291 aa		14.81	□□□□□ -0.04
PSMC3-205	ENST00000528362	TAF5L	O75529	589 aa		14.81	□□□□□ -0.04
PSMC3-205	ENST00000528362	EGFR	P00533	1210 aa		14.81	□□□□□ -0.04
PSMC3-205	ENST00000528362	RSBN1L	Q6PCB5	846 aa	Predicted RBP	14.81	□□□□□ -0.04
PSMC3-205	ENST00000528362	LDHAL6A	Q6ZMR3	332 aa		14.81	□□□□□ -0.04
PSMC3-205	ENST00000528362	JMY	Q8N9B5	988 aa		14.81	□□□□□ -0.04
PSMC3-205	ENST00000528362	COA1	Q9GZY4	146 aa		14.81	□□□□□ -0.04
PSMC3-205	ENST00000528362	KIF16B	Q96L93	1317 aa		14.81	□□□□□ -0.04
PSMC3-205	ENST00000528362	IRS2	Q9Y4H2	1338 aa		14.81	□□□□□ -0.04
PSMC3-205	ENST00000528362	ZNF609	O15014	1411 aa		14.81	□□□□□ -0.04
PSMC3-205	ENST00000528362	USP17L3	A6NCW0	530 aa		14.8	□□□□□ -0.04
PSMC3-205	ENST00000528362	USP17L4	A6NCW7	530 aa		14.8	□□□□□ -0.04
PSMC3-205	ENST00000528362	KCNJ4	P48050	445 aa		14.8	□□□□□ -0.04
PSMC3-205	ENST00000528362	FMR1	Q06787	632 aa	Known RBP eCLIP	14.8	□□□□□ -0.04
PSMC3-205	ENST00000528362	USP17L1	Q7RTZ2	530 aa		14.8	□□□□□ -0.04
PSMC3-205	ENST00000528362	SAMD7	Q7Z3H4	446 aa		14.8	□□□□□ -0.04

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms