RNA–Protein interactions for RNA: ENST00000528253.3

PTP4A2-210, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-210ENST00000528253 TWISTNBQ3B726 338 aaPredicted RBP9.22□□□□□ -0.93
PTP4A2-210ENST00000528253 ERFEQ4G0M1 354 aa9.22□□□□□ -0.93
PTP4A2-210ENST00000528253 SUSD4Q5VX71 490 aa9.22□□□□□ -0.93
PTP4A2-210ENST00000528253 DIEXFQ68CQ4 756 aaKnown RBP9.22□□□□□ -0.93
PTP4A2-210ENST00000528253 RIC3Q7Z5B4 369 aa9.22□□□□□ -0.93
PTP4A2-210ENST00000528253 NUTM1Q86Y26 1132 aa9.22□□□□□ -0.93
PTP4A2-210ENST00000528253 UTP14AQ9BVJ6 771 aaKnown RBP9.22□□□□□ -0.93
PTP4A2-210ENST00000528253 DICER1Q9UPY3 1922 aaKnown RBP9.22□□□□□ -0.93
PTP4A2-210ENST00000528253 FER1L6Q2WGJ9 1857 aa9.21□□□□□ -0.93
PTP4A2-210ENST00000528253 KLRG2A4D1S0 409 aaPredicted RBP9.21□□□□□ -0.94
PTP4A2-210ENST00000528253 GPR37O15354 613 aa9.21□□□□□ -0.94
PTP4A2-210ENST00000528253 SOGA3Q5TF21 947 aa9.21□□□□□ -0.94
PTP4A2-210ENST00000528253 TSPYL6Q8N831 410 aa9.21□□□□□ -0.94
PTP4A2-210ENST00000528253 RPGRQ92834 1020 aaKnown RBP9.21□□□□□ -0.94
PTP4A2-210ENST00000528253 NLRP3Q96P20 1036 aa9.21□□□□□ -0.94
PTP4A2-210ENST00000528253 MYH16Q9H6N6 1097 aa9.21□□□□□ -0.94
PTP4A2-210ENST00000528253 TRMT112Q9UI30 125 aaKnown RBP9.21□□□□□ -0.94
PTP4A2-210ENST00000528253 UBN2Q6ZU65 1347 aa9.21□□□□□ -0.94
PTP4A2-210ENST00000528253 IBTKQ9P2D0 1353 aaPredicted RBP9.21□□□□□ -0.94
PTP4A2-210ENST00000528253 LAMB2P55268 1798 aa9.2□□□□□ -0.94
PTP4A2-210ENST00000528253 C21orf2O43822 256 aa9.2□□□□□ -0.94
PTP4A2-210ENST00000528253 NTSR2O95665 410 aa9.2□□□□□ -0.94
PTP4A2-210ENST00000528253 HIC1Q14526 733 aa9.2□□□□□ -0.94
PTP4A2-210ENST00000528253 NLRP10Q86W26 655 aa9.2□□□□□ -0.94
PTP4A2-210ENST00000528253 PHAXQ9H814 394 aaKnown RBP9.2□□□□□ -0.94
PTP4A2-210ENST00000528253 RNF123Q5XPI4 1314 aa9.2□□□□□ -0.94
PTP4A2-210ENST00000528253 FANCIQ9NVI1 1328 aa9.2□□□□□ -0.94
PTP4A2-210ENST00000528253 ATP5J2-PTCD1G3V325 749 aa9.19□□□□□ -0.94
PTP4A2-210ENST00000528253 EXOSC9Q06265 439 aaKnown RBP9.19□□□□□ -0.94
PTP4A2-210ENST00000528253 MAP2K5Q13163 448 aa9.19□□□□□ -0.94
PTP4A2-210ENST00000528253 SLC10A5Q5PT55 438 aa9.19□□□□□ -0.94
PTP4A2-210ENST00000528253 C9orf131Q5VYM1 1079 aa9.19□□□□□ -0.94
PTP4A2-210ENST00000528253 PRPF40BQ6NWY9 871 aaKnown RBP9.19□□□□□ -0.94
PTP4A2-210ENST00000528253 RBM17Q96I25 401 aaKnown RBP9.19□□□□□ -0.94
PTP4A2-210ENST00000528253 GPBP1L1Q9HC44 474 aaPredicted RBP9.19□□□□□ -0.94
PTP4A2-210ENST00000528253 SH3TC1Q8TE82 1336 aa9.19□□□□□ -0.94
PTP4A2-210ENST00000528253 TCERG1O14776 1098 aaKnown RBP9.18□□□□□ -0.94
PTP4A2-210ENST00000528253 TRIM66O15016 1216 aa9.18□□□□□ -0.94
PTP4A2-210ENST00000528253 VAMP4O75379 141 aa9.18□□□□□ -0.94
PTP4A2-210ENST00000528253 HSP90B1P14625 803 aaKnown RBP9.18□□□□□ -0.94
PTP4A2-210ENST00000528253 LMNB1P20700 586 aa9.18□□□□□ -0.94
PTP4A2-210ENST00000528253 TAF1P21675 1872 aa9.18□□□□□ -0.94
PTP4A2-210ENST00000528253 TRIM28Q13263 835 aaKnown RBP9.18□□□□□ -0.94
PTP4A2-210ENST00000528253 CRY2Q49AN0 593 aa9.18□□□□□ -0.94
PTP4A2-210ENST00000528253 RIC1Q4ADV7 1423 aa9.18□□□□□ -0.94
PTP4A2-210ENST00000528253 EPAS1Q99814 870 aa9.18□□□□□ -0.94
PTP4A2-210ENST00000528253 MYD88Q99836 296 aa9.18□□□□□ -0.94
PTP4A2-210ENST00000528253 ISCA1Q9BUE6 129 aa9.18□□□□□ -0.94
PTP4A2-210ENST00000528253 TMX4Q9H1E5 349 aaPredicted RBP9.18□□□□□ -0.94
PTP4A2-210ENST00000528253 TNRC6CQ9HCJ0 1690 aaKnown RBP9.18□□□□□ -0.94
PTP4A2-210ENST00000528253 RNF181Q9P0P0 153 aa9.18□□□□□ -0.94
PTP4A2-210ENST00000528253 MYH3P11055 1940 aa9.17□□□□□ -0.94
PTP4A2-210ENST00000528253 ABCC12Q96J65 1359 aa9.17□□□□□ -0.94
PTP4A2-210ENST00000528253 HCLS1P14317 486 aaPredicted RBP9.17□□□□□ -0.94
PTP4A2-210ENST00000528253 HOXA10P31260 410 aaPredicted RBP9.17□□□□□ -0.94
PTP4A2-210ENST00000528253 RASSF7Q02833 373 aa9.17□□□□□ -0.94
PTP4A2-210ENST00000528253 NEXNQ0ZGT2 675 aa9.17□□□□□ -0.94
PTP4A2-210ENST00000528253 CCDC93Q567U6 631 aa9.17□□□□□ -0.94
PTP4A2-210ENST00000528253 KSR2Q6VAB6 950 aa9.17□□□□□ -0.94
PTP4A2-210ENST00000528253 RTKN2Q8IZC4 609 aa9.17□□□□□ -0.94
PTP4A2-210ENST00000528253 CCDC191Q8NCU4 936 aa9.17□□□□□ -0.94
PTP4A2-210ENST00000528253 ZNF526Q8TF50 670 aaPredicted RBP9.17□□□□□ -0.94
PTP4A2-210ENST00000528253 CRAMP1Q96RY5 1269 aa9.17□□□□□ -0.94
PTP4A2-210ENST00000528253 MAP3K2Q9Y2U5 619 aa9.17□□□□□ -0.94
PTP4A2-210ENST00000528253 DDX60Q8IY21 1712 aaKnown RBP9.17□□□□□ -0.94
PTP4A2-210ENST00000528253 ADCY9O60503 1353 aa9.16□□□□□ -0.94
PTP4A2-210ENST00000528253 PI4KAP2A4QPH2 592 aa9.16□□□□□ -0.94
PTP4A2-210ENST00000528253 E9PSI1 815 aa9.16□□□□□ -0.94
PTP4A2-210ENST00000528253 GRIPAP1Q4V328 841 aa9.16□□□□□ -0.94
PTP4A2-210ENST00000528253 CC2D2BQ6DHV5 1058 aa9.16□□□□□ -0.94
PTP4A2-210ENST00000528253 DDX46Q7L014 1031 aaKnown RBP9.16□□□□□ -0.94
PTP4A2-210ENST00000528253 PI4KAP1Q8N8J0 262 aa9.16□□□□□ -0.94
PTP4A2-210ENST00000528253 C7orf43Q8WVR3 580 aa9.16□□□□□ -0.94
PTP4A2-210ENST00000528253 ZNF428Q96B54 188 aa9.16□□□□□ -0.94
PTP4A2-210ENST00000528253 FAM89AQ96GI7 184 aa9.16□□□□□ -0.94
PTP4A2-210ENST00000528253 METTL22Q9BUU2 404 aaPredicted RBP9.16□□□□□ -0.94
PTP4A2-210ENST00000528253 TAOK3Q9H2K8 898 aa9.16□□□□□ -0.94
PTP4A2-210ENST00000528253 CWC25Q9NXE8 425 aaPredicted RBP9.16□□□□□ -0.94
PTP4A2-210ENST00000528253 KDM2BQ8NHM5 1336 aa9.15□□□□□ -0.94
PTP4A2-210ENST00000528253 ZNF521Q96K83 1311 aa9.15□□□□□ -0.94
PTP4A2-210ENST00000528253 LTBP3Q9NS15 1303 aa9.15□□□□□ -0.94
PTP4A2-210ENST00000528253 ZC3H4Q9UPT8 1303 aaKnown RBP9.15□□□□□ -0.94
PTP4A2-210ENST00000528253 NFKBIEO00221 500 aa9.15□□□□□ -0.94
PTP4A2-210ENST00000528253 BBOX1O75936 387 aa9.15□□□□□ -0.94
PTP4A2-210ENST00000528253 PDE4DQ08499 809 aa9.15□□□□□ -0.94
PTP4A2-210ENST00000528253 FLIIQ13045 1269 aa9.15□□□□□ -0.94
PTP4A2-210ENST00000528253 FKBP5Q13451 457 aaPredicted RBP9.15□□□□□ -0.94
PTP4A2-210ENST00000528253 RTL5Q5HYW3 569 aaPredicted RBP9.15□□□□□ -0.94
PTP4A2-210ENST00000528253 G2E3Q7L622 706 aa9.15□□□□□ -0.94
PTP4A2-210ENST00000528253 SYNE4Q8N205 404 aa9.15□□□□□ -0.94
PTP4A2-210ENST00000528253 ZBTB38Q8NAP3 1195 aaPredicted RBP9.15□□□□□ -0.94
PTP4A2-210ENST00000528253 PCDHGA4Q9Y5G9 962 aa9.15□□□□□ -0.94
PTP4A2-210ENST00000528253 TIAM2Q8IVF5 1701 aa9.14□□□□□ -0.95
PTP4A2-210ENST00000528253 IRS4O14654 1257 aaPredicted RBP9.14□□□□□ -0.95
PTP4A2-210ENST00000528253 PPEF1O14829 653 aaPredicted RBP9.14□□□□□ -0.95
PTP4A2-210ENST00000528253 IRF6O14896 467 aa9.14□□□□□ -0.95
PTP4A2-210ENST00000528253 FKBP4Q02790 459 aaKnown RBP eCLIP9.14□□□□□ -0.95
PTP4A2-210ENST00000528253 CCDC102AQ96A19 550 aa9.14□□□□□ -0.95
PTP4A2-210ENST00000528253 MAP3K7O43318 606 aa9.13□□□□□ -0.95
PTP4A2-210ENST00000528253 PCCAP05165 728 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms