RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 CAPNS2Q96L46 248 aa33.27■■■□□ 2.92
TRIM3-206ENST00000528227 RTL9Q8NET4 1388 aa33.26■■■□□ 2.92
TRIM3-206ENST00000528227 PI4KAP2A4QPH2 592 aa33.26■■■□□ 2.91
TRIM3-206ENST00000528227 IGKV5-2P06315 115 aa33.26■■■□□ 2.91
TRIM3-206ENST00000528227 MAP2K1Q02750 393 aaPredicted RBP33.26■■■□□ 2.91
TRIM3-206ENST00000528227 PI4KAP1Q8N8J0 262 aa33.26■■■□□ 2.91
TRIM3-206ENST00000528227 CCDC85AQ96PX6 553 aaPredicted RBP33.26■■■□□ 2.91
TRIM3-206ENST00000528227 STK31Q9BXU1 1019 aa33.26■■■□□ 2.91
TRIM3-206ENST00000528227 KCNQ5Q9NR82 932 aa33.26■■■□□ 2.91
TRIM3-206ENST00000528227 CELF2O95319 508 aaKnown RBP33.25■■■□□ 2.91
TRIM3-206ENST00000528227 ECE1P42892 770 aa33.25■■■□□ 2.91
TRIM3-206ENST00000528227 CYP4F22Q6NT55 531 aa33.25■■■□□ 2.91
TRIM3-206ENST00000528227 PAXIP1Q6ZW49 1069 aaPredicted RBP33.25■■■□□ 2.91
TRIM3-206ENST00000528227 ZC3H12CQ9C0D7 883 aaKnown RBP33.25■■■□□ 2.91
TRIM3-206ENST00000528227 ANKIB1Q9P2G1 1089 aa33.25■■■□□ 2.91
TRIM3-206ENST00000528227 UFL1O94874 794 aa33.24■■■□□ 2.91
TRIM3-206ENST00000528227 RPS12P25398 132 aaKnown RBP33.24■■■□□ 2.91
TRIM3-206ENST00000528227 TWISTNBQ3B726 338 aaPredicted RBP33.24■■■□□ 2.91
TRIM3-206ENST00000528227 CDC37L1Q7L3B6 337 aa33.24■■■□□ 2.91
TRIM3-206ENST00000528227 IL16Q14005 1332 aa33.24■■■□□ 2.91
TRIM3-206ENST00000528227 NCBP3Q53F19 620 aaKnown RBP33.23■■■□□ 2.91
TRIM3-206ENST00000528227 SAMD7Q7Z3H4 446 aa33.23■■■□□ 2.91
TRIM3-206ENST00000528227 GGA1Q9UJY5 639 aa33.23■■■□□ 2.91
TRIM3-206ENST00000528227 SCN9AQ15858 1988 aa33.22■■■□□ 2.91
TRIM3-206ENST00000528227 SAPCD2Q86UD0 394 aa33.22■■■□□ 2.91
TRIM3-206ENST00000528227 LBX1P52954 281 aa33.21■■■□□ 2.91
TRIM3-206ENST00000528227 CTSWP56202 376 aa33.21■■■□□ 2.91
TRIM3-206ENST00000528227 NEXNQ0ZGT2 675 aa33.21■■■□□ 2.91
TRIM3-206ENST00000528227 GRM1Q13255 1194 aa33.21■■■□□ 2.91
TRIM3-206ENST00000528227 ANKRD18AQ8IVF6 992 aa33.21■■■□□ 2.91
TRIM3-206ENST00000528227 G2E3Q7L622 706 aa33.2■■■□□ 2.91
TRIM3-206ENST00000528227 MRS2Q9HD23 443 aa33.2■■■□□ 2.91
TRIM3-206ENST00000528227 EGFRP00533 1210 aa33.19■■■□□ 2.9
TRIM3-206ENST00000528227 HSPA8P11142 646 aaKnown RBP33.19■■■□□ 2.9
TRIM3-206ENST00000528227 CWF19L2Q2TBE0 894 aaKnown RBP33.19■■■□□ 2.9
TRIM3-206ENST00000528227 TBC1D10BQ4KMP7 808 aaPredicted RBP33.19■■■□□ 2.9
TRIM3-206ENST00000528227 MYH3P11055 1940 aa33.19■■■□□ 2.9
TRIM3-206ENST00000528227 SLC4A2P04920 1241 aa33.18■■■□□ 2.9
TRIM3-206ENST00000528227 VIL1P09327 827 aaKnown RBP33.18■■■□□ 2.9
TRIM3-206ENST00000528227 ZNF408Q9H9D4 720 aa33.18■■■□□ 2.9
TRIM3-206ENST00000528227 XDHP47989 1333 aa33.18■■■□□ 2.9
TRIM3-206ENST00000528227 NEURL1BA8MQ27 555 aa33.17■■■□□ 2.9
TRIM3-206ENST00000528227 G3V3G9 751 aa33.17■■■□□ 2.9
TRIM3-206ENST00000528227 DCAF8Q5TAQ9 597 aa33.17■■■□□ 2.9
TRIM3-206ENST00000528227 USP48Q86UV5 1035 aa33.17■■■□□ 2.9
TRIM3-206ENST00000528227 TTLL11Q8NHH1 800 aa33.17■■■□□ 2.9
TRIM3-206ENST00000528227 HHIPL1Q96JK4 782 aa33.17■■■□□ 2.9
TRIM3-206ENST00000528227 ZEB1P37275 1124 aaPredicted RBP33.16■■■□□ 2.9
TRIM3-206ENST00000528227 CDC5LQ99459 802 aaKnown RBP33.16■■■□□ 2.9
TRIM3-206ENST00000528227 FANCIQ9NVI1 1328 aa33.15■■■□□ 2.9
TRIM3-206ENST00000528227 PSME4Q14997 1843 aa33.14■■■□□ 2.9
TRIM3-206ENST00000528227 AOC2O75106 756 aa33.14■■■□□ 2.9
TRIM3-206ENST00000528227 RBM26Q5T8P6 1007 aaKnown RBP33.14■■■□□ 2.9
TRIM3-206ENST00000528227 GREM2Q9H772 168 aa33.14■■■□□ 2.9
TRIM3-206ENST00000528227 SPEF2Q9C093 1822 aa33.14■■■□□ 2.9
TRIM3-206ENST00000528227 ZNF609O15014 1411 aa33.13■■■□□ 2.89
TRIM3-206ENST00000528227 ANP32CO43423 234 aa33.13■■■□□ 2.89
TRIM3-206ENST00000528227 ATP2B4P23634 1241 aa33.13■■■□□ 2.89
TRIM3-206ENST00000528227 MAP2K2P36507 400 aa33.13■■■□□ 2.89
TRIM3-206ENST00000528227 DLK2Q6UY11 383 aa33.13■■■□□ 2.89
TRIM3-206ENST00000528227 H7C1W4 665 aa33.12■■■□□ 2.89
TRIM3-206ENST00000528227 FLIIQ13045 1269 aa33.12■■■□□ 2.89
TRIM3-206ENST00000528227 KRT26Q7Z3Y9 468 aa33.12■■■□□ 2.89
TRIM3-206ENST00000528227 KIF4BQ2VIQ3 1234 aa33.11■■■□□ 2.89
TRIM3-206ENST00000528227 UBE3BQ7Z3V4 1068 aa33.11■■■□□ 2.89
TRIM3-206ENST00000528227 BEGAINQ9BUH8 593 aa33.11■■■□□ 2.89
TRIM3-206ENST00000528227 BSDC1Q9NW68 430 aaPredicted RBP33.11■■■□□ 2.89
TRIM3-206ENST00000528227 WDR63Q8IWG1 891 aa33.1■■■□□ 2.89
TRIM3-206ENST00000528227 DCPSQ96C86 337 aaKnown RBP33.1■■■□□ 2.89
TRIM3-206ENST00000528227 MINPP1Q9UNW1 487 aa33.1■■■□□ 2.89
TRIM3-206ENST00000528227 POLR2AP24928 1970 aaKnown RBP33.1■■■□□ 2.89
TRIM3-206ENST00000528227 RSBN1LQ6PCB5 846 aaPredicted RBP33.09■■■□□ 2.89
TRIM3-206ENST00000528227 AGBL3Q8NEM8 1001 aa33.09■■■□□ 2.89
TRIM3-206ENST00000528227 SALL2Q9Y467 1007 aaPredicted RBP33.09■■■□□ 2.89
TRIM3-206ENST00000528227 ZNF316A6NFI3 1004 aaPredicted RBP33.08■■■□□ 2.89
TRIM3-206ENST00000528227 GCKRQ14397 625 aa33.08■■■□□ 2.89
TRIM3-206ENST00000528227 CACNA1FO60840 1977 aa33.08■■■□□ 2.89
TRIM3-206ENST00000528227 WTIPA6NIX2 430 aaPredicted RBP33.07■■■□□ 2.88
TRIM3-206ENST00000528227 ADM5C9JUS6 153 aa33.07■■■□□ 2.88
TRIM3-206ENST00000528227 ZNF280AP59817 542 aaPredicted RBP33.07■■■□□ 2.88
TRIM3-206ENST00000528227 FKBP5Q13451 457 aaPredicted RBP33.07■■■□□ 2.88
TRIM3-206ENST00000528227 PODNQ7Z5L7 613 aa33.07■■■□□ 2.88
TRIM3-206ENST00000528227 PLA2G12BQ9BX93 195 aa33.07■■■□□ 2.88
TRIM3-206ENST00000528227 MED23Q9ULK4 1368 aa33.07■■■□□ 2.88
TRIM3-206ENST00000528227 VAMP4O75379 141 aa33.06■■■□□ 2.88
TRIM3-206ENST00000528227 DNAAF4Q8WXU2 420 aa33.06■■■□□ 2.88
TRIM3-206ENST00000528227 GGA3Q9NZ52 723 aa33.06■■■□□ 2.88
TRIM3-206ENST00000528227 CASP7P55210 303 aa33.05■■■□□ 2.88
TRIM3-206ENST00000528227 HUNKP57058 714 aa33.05■■■□□ 2.88
TRIM3-206ENST00000528227 GMLQ99445 158 aa33.05■■■□□ 2.88
TRIM3-206ENST00000528227 ASTN2O75129 1339 aaPredicted RBP33.04■■■□□ 2.88
TRIM3-206ENST00000528227 CCT4P50991 539 aaKnown RBP33.04■■■□□ 2.88
TRIM3-206ENST00000528227 LINS1Q8NG48 757 aa33.04■■■□□ 2.88
TRIM3-206ENST00000528227 MYH16Q9H6N6 1097 aa33.04■■■□□ 2.88
TRIM3-206ENST00000528227 USP17L3A6NCW0 530 aa33.03■■■□□ 2.88
TRIM3-206ENST00000528227 USP17L4A6NCW7 530 aa33.03■■■□□ 2.88
TRIM3-206ENST00000528227 BRPF1P55201 1214 aaPredicted RBP33.03■■■□□ 2.88
TRIM3-206ENST00000528227 EXOSC9Q06265 439 aaKnown RBP33.03■■■□□ 2.88
TRIM3-206ENST00000528227 USP17L1Q7RTZ2 530 aa33.03■■■□□ 2.88
TRIM3-206ENST00000528227 GBA2Q9HCG7 927 aaPredicted RBP33.03■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms