RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 ZC3H12CQ9C0D7 883 aaKnown RBP19.72■□□□□ 0.75
CAPN1-213ENST00000527897 CHMP3Q9Y3E7 222 aa19.72■□□□□ 0.75
CAPN1-213ENST00000527897 YDJCA8MPS7 323 aa19.71■□□□□ 0.75
CAPN1-213ENST00000527897 GMPSP49915 693 aaPredicted RBP19.71■□□□□ 0.75
CAPN1-213ENST00000527897 CASP7P55210 303 aa19.71■□□□□ 0.75
CAPN1-213ENST00000527897 TNIP1Q15025 636 aa19.71■□□□□ 0.75
CAPN1-213ENST00000527897 FAM161AQ3B820 660 aa19.71■□□□□ 0.75
CAPN1-213ENST00000527897 ECE2O60344 883 aa19.7■□□□□ 0.74
CAPN1-213ENST00000527897 ITGA6P23229 1130 aa19.7■□□□□ 0.74
CAPN1-213ENST00000527897 IGHMBP2P38935 993 aaKnown RBP19.7■□□□□ 0.74
CAPN1-213ENST00000527897 MAP1SQ66K74 1059 aaPredicted RBP19.7■□□□□ 0.74
CAPN1-213ENST00000527897 MRPL50Q8N5N7 158 aaKnown RBP19.7■□□□□ 0.74
CAPN1-213ENST00000527897 SSH1Q8WYL5 1049 aa19.7■□□□□ 0.74
CAPN1-213ENST00000527897 PODXL2Q9NZ53 605 aa19.7■□□□□ 0.74
CAPN1-213ENST00000527897 C9orf78Q9NZ63 289 aaPredicted RBP19.7■□□□□ 0.74
CAPN1-213ENST00000527897 PLA2G12BQ9BX93 195 aa19.69■□□□□ 0.74
CAPN1-213ENST00000527897 SRCIN1Q9C0H9 1055 aa19.69■□□□□ 0.74
CAPN1-213ENST00000527897 GPRC5DQ9NZD1 345 aa19.69■□□□□ 0.74
CAPN1-213ENST00000527897 XDHP47989 1333 aa19.69■□□□□ 0.74
CAPN1-213ENST00000527897 GRM8O00222 908 aa19.68■□□□□ 0.74
CAPN1-213ENST00000527897 MPHOSPH8Q99549 860 aa19.68■□□□□ 0.74
CAPN1-213ENST00000527897 BSDC1Q9NW68 430 aaPredicted RBP19.68■□□□□ 0.74
CAPN1-213ENST00000527897 MINPP1Q9UNW1 487 aa19.68■□□□□ 0.74
CAPN1-213ENST00000527897 ZBTB12Q9Y330 459 aaPredicted RBP19.68■□□□□ 0.74
CAPN1-213ENST00000527897 RTL9Q8NET4 1388 aa19.68■□□□□ 0.74
CAPN1-213ENST00000527897 PSMD14O00487 310 aa19.67■□□□□ 0.74
CAPN1-213ENST00000527897 ATP2B4P23634 1241 aa19.67■□□□□ 0.74
CAPN1-213ENST00000527897 DNAJC5GQ8N7S2 189 aa19.67■□□□□ 0.74
CAPN1-213ENST00000527897 KCNQ5Q9NR82 932 aa19.67■□□□□ 0.74
CAPN1-213ENST00000527897 ADARB2Q9NS39 739 aaKnown RBP19.67■□□□□ 0.74
CAPN1-213ENST00000527897 SMC4Q9NTJ3 1288 aa19.67■□□□□ 0.74
CAPN1-213ENST00000527897 ADAMTSL1Q8N6G6 1762 aa19.66■□□□□ 0.74
CAPN1-213ENST00000527897 ANKRD18BA2A2Z9 1011 aa19.66■□□□□ 0.74
CAPN1-213ENST00000527897 ALDH1L1O75891 902 aa19.66■□□□□ 0.74
CAPN1-213ENST00000527897 CSF1RP07333 972 aa19.66■□□□□ 0.74
CAPN1-213ENST00000527897 USP50Q70EL3 339 aaPredicted RBP19.66■□□□□ 0.74
CAPN1-213ENST00000527897 CNTROBQ8N137 903 aa19.66■□□□□ 0.74
CAPN1-213ENST00000527897 WTIPA6NIX2 430 aaPredicted RBP19.65■□□□□ 0.74
CAPN1-213ENST00000527897 FOXO4P98177 505 aa19.65■□□□□ 0.74
CAPN1-213ENST00000527897 IFIT5Q13325 482 aaKnown RBP19.65■□□□□ 0.74
CAPN1-213ENST00000527897 LMBR1LQ6UX01 489 aa19.65■□□□□ 0.74
CAPN1-213ENST00000527897 KLRG1Q96E93 195 aa19.65■□□□□ 0.74
CAPN1-213ENST00000527897 SHTN1A0MZ66 631 aa19.64■□□□□ 0.73
CAPN1-213ENST00000527897 CCT4P50991 539 aaKnown RBP19.64■□□□□ 0.73
CAPN1-213ENST00000527897 TAF7LQ5H9L4 462 aa19.64■□□□□ 0.73
CAPN1-213ENST00000527897 EPHA10Q5JZY3 1008 aa19.64■□□□□ 0.73
CAPN1-213ENST00000527897 CNOT7Q9UIV1 285 aaKnown RBP19.64■□□□□ 0.73
CAPN1-213ENST00000527897 PTPRCP08575 1304 aa19.64■□□□□ 0.73
CAPN1-213ENST00000527897 SCN9AQ15858 1988 aa19.63■□□□□ 0.73
CAPN1-213ENST00000527897 H7C1D1 291 aa19.63■□□□□ 0.73
CAPN1-213ENST00000527897 ITGBL1O95965 494 aaPredicted RBP19.63■□□□□ 0.73
CAPN1-213ENST00000527897 MICALL2Q8IY33 904 aa19.63■□□□□ 0.73
CAPN1-213ENST00000527897 TRMT2AQ8IZ69 625 aaKnown RBP19.63■□□□□ 0.73
CAPN1-213ENST00000527897 PASKQ96RG2 1323 aa19.62■□□□□ 0.73
CAPN1-213ENST00000527897 KCNJ4P48050 445 aa19.62■□□□□ 0.73
CAPN1-213ENST00000527897 CCDC57Q2TAC2 916 aa19.62■□□□□ 0.73
CAPN1-213ENST00000527897 ALDH1L2Q3SY69 923 aa19.62■□□□□ 0.73
CAPN1-213ENST00000527897 SUCLG2Q96I99 432 aa19.62■□□□□ 0.73
CAPN1-213ENST00000527897 CREBZFQ9NS37 354 aa19.62■□□□□ 0.73
CAPN1-213ENST00000527897 TRPM4Q8TD43 1214 aa19.61■□□□□ 0.73
CAPN1-213ENST00000527897 FBXW7Q969H0 707 aa19.61■□□□□ 0.73
CAPN1-213ENST00000527897 ZNF594Q96JF6 807 aaPredicted RBP19.61■□□□□ 0.73
CAPN1-213ENST00000527897 ANKRD2Q9GZV1 360 aa19.61■□□□□ 0.73
CAPN1-213ENST00000527897 MKRN1Q9UHC7 482 aaKnown RBP19.61■□□□□ 0.73
CAPN1-213ENST00000527897 NBPF7P0C2Y1 421 aaPredicted RBP19.6■□□□□ 0.73
CAPN1-213ENST00000527897 HNRNPUQ00839 825 aaKnown RBP eCLIP19.6■□□□□ 0.73
CAPN1-213ENST00000527897 CHRNDQ07001 517 aa19.6■□□□□ 0.73
CAPN1-213ENST00000527897 RBM26Q5T8P6 1007 aaKnown RBP19.6■□□□□ 0.73
CAPN1-213ENST00000527897 HELBQ8NG08 1087 aaPredicted RBP19.6■□□□□ 0.73
CAPN1-213ENST00000527897 MED23Q9ULK4 1368 aa19.59■□□□□ 0.73
CAPN1-213ENST00000527897 ZNF804BA4D1E1 1349 aa19.59■□□□□ 0.73
CAPN1-213ENST00000527897 PCNTO95613 3336 aa19.59■□□□□ 0.73
CAPN1-213ENST00000527897 TMEM88BA6NKF7 163 aa19.59■□□□□ 0.73
CAPN1-213ENST00000527897 PLIN1O60240 522 aa19.59■□□□□ 0.73
CAPN1-213ENST00000527897 FMR1Q06787 632 aaKnown RBP eCLIP19.59■□□□□ 0.732e-6■■■□□ 15.1
CAPN1-213ENST00000527897 TBC1D10BQ4KMP7 808 aaPredicted RBP19.59■□□□□ 0.73
CAPN1-213ENST00000527897 SAMD7Q7Z3H4 446 aa19.59■□□□□ 0.73
CAPN1-213ENST00000527897 DPF2Q92785 391 aa19.59■□□□□ 0.73
CAPN1-213ENST00000527897 LEMD3Q9Y2U8 911 aa19.59■□□□□ 0.73
CAPN1-213ENST00000527897 TRAF5O00463 557 aa19.58■□□□□ 0.72
CAPN1-213ENST00000527897 TAF5LO75529 589 aa19.58■□□□□ 0.72
CAPN1-213ENST00000527897 VIL1P09327 827 aaKnown RBP19.58■□□□□ 0.72
CAPN1-213ENST00000527897 CT47B1P0C2W7 299 aaPredicted RBP19.58■□□□□ 0.72
CAPN1-213ENST00000527897 RPS12P25398 132 aaKnown RBP19.58■□□□□ 0.72
CAPN1-213ENST00000527897 HIRAP54198 1017 aaPredicted RBP19.58■□□□□ 0.72
CAPN1-213ENST00000527897 LDHAL6AQ6ZMR3 332 aa19.58■□□□□ 0.72
CAPN1-213ENST00000527897 CNNM1Q9NRU3 951 aa19.58■□□□□ 0.72
CAPN1-213ENST00000527897 NOB1Q9ULX3 412 aaKnown RBP19.58■□□□□ 0.72
CAPN1-213ENST00000527897 SNAP23O00161 211 aa19.57■□□□□ 0.72
CAPN1-213ENST00000527897 KLRK1P26718 216 aa19.57■□□□□ 0.72
CAPN1-213ENST00000527897 TXNRD3Q86VQ6 643 aa19.57■□□□□ 0.72
CAPN1-213ENST00000527897 BICC1Q9H694 974 aaKnown RBP19.57■□□□□ 0.72
CAPN1-213ENST00000527897 USP17L3A6NCW0 530 aa19.56■□□□□ 0.72
CAPN1-213ENST00000527897 USP17L4A6NCW7 530 aa19.56■□□□□ 0.72
CAPN1-213ENST00000527897 RSBN1LQ6PCB5 846 aaPredicted RBP19.56■□□□□ 0.72
CAPN1-213ENST00000527897 USP17L1Q7RTZ2 530 aa19.56■□□□□ 0.72
CAPN1-213ENST00000527897 PODNQ7Z5L7 613 aa19.56■□□□□ 0.72
CAPN1-213ENST00000527897 KAZALD1Q96I82 304 aa19.56■□□□□ 0.72
CAPN1-213ENST00000527897 GLIS2Q9BZE0 524 aaPredicted RBP19.56■□□□□ 0.72
CAPN1-213ENST00000527897 ABT1Q9ULW3 272 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms