RNA–Protein interactions for RNA: ENST00000527821.2

SSH3-205, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 3

Gene SSH3, Length 656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-205ENST00000527821 DUOX1Q9NRD9 1551 aa20.73■□□□□ 0.91
SSH3-205ENST00000527821 ZNF594Q96JF6 807 aaPredicted RBP20.73■□□□□ 0.91
SSH3-205ENST00000527821 VPS33BQ9H267 617 aa20.73■□□□□ 0.91
SSH3-205ENST00000527821 GPBP1L1Q9HC44 474 aaPredicted RBP20.73■□□□□ 0.91
SSH3-205ENST00000527821 PODXL2Q9NZ53 605 aa20.73■□□□□ 0.91
SSH3-205ENST00000527821 XDHP47989 1333 aa20.73■□□□□ 0.91
SSH3-205ENST00000527821 DPY19L2Q6NUT2 758 aa20.72■□□□□ 0.91
SSH3-205ENST00000527821 ITPRIPQ8IWB1 547 aa20.72■□□□□ 0.91
SSH3-205ENST00000527821 TBC1D16Q8TBP0 767 aa20.72■□□□□ 0.91
SSH3-205ENST00000527821 POLLQ9UGP5 575 aa20.72■□□□□ 0.91
SSH3-205ENST00000527821 GGA1Q9UJY5 639 aa20.72■□□□□ 0.91
SSH3-205ENST00000527821 LRRFIP2Q9Y608 721 aaKnown RBP20.72■□□□□ 0.91
SSH3-205ENST00000527821 LTBP1Q14766 1721 aa20.72■□□□□ 0.91
SSH3-205ENST00000527821 KDM2BQ8NHM5 1336 aa20.72■□□□□ 0.91
SSH3-205ENST00000527821 PLIN1O60240 522 aa20.71■□□□□ 0.91
SSH3-205ENST00000527821 UFL1O94874 794 aa20.71■□□□□ 0.91
SSH3-205ENST00000527821 MS4A1P11836 297 aa20.71■□□□□ 0.91
SSH3-205ENST00000527821 RLBP1P12271 317 aa20.71■□□□□ 0.91
SSH3-205ENST00000527821 WASHC4Q2M389 1173 aa20.71■□□□□ 0.91
SSH3-205ENST00000527821 LDHAL6AQ6ZMR3 332 aa20.71■□□□□ 0.91
SSH3-205ENST00000527821 NIM1KQ8IY84 436 aa20.71■□□□□ 0.91
SSH3-205ENST00000527821 EYA3Q99504 573 aa20.71■□□□□ 0.91
SSH3-205ENST00000527821 GLTPD2A6NH11 291 aa20.7■□□□□ 0.9
SSH3-205ENST00000527821 KIAA2012Q0VF49 1180 aa20.7■□□□□ 0.9
SSH3-205ENST00000527821 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.7■□□□□ 0.9
SSH3-205ENST00000527821 PANK1Q8TE04 598 aa20.7■□□□□ 0.9
SSH3-205ENST00000527821 CNNM1Q9NRU3 951 aa20.7■□□□□ 0.9
SSH3-205ENST00000527821 COL4A5P29400 1685 aa20.7■□□□□ 0.9
SSH3-205ENST00000527821 RIMBP2O15034 1052 aa20.69■□□□□ 0.9
SSH3-205ENST00000527821 ATP2B4P23634 1241 aa20.69■□□□□ 0.9
SSH3-205ENST00000527821 CHRNDQ07001 517 aa20.69■□□□□ 0.9
SSH3-205ENST00000527821 GPR101Q96P66 508 aaPredicted RBP20.69■□□□□ 0.9
SSH3-205ENST00000527821 ANKRD2Q9GZV1 360 aa20.69■□□□□ 0.9
SSH3-205ENST00000527821 FZD9O00144 591 aa20.68■□□□□ 0.9
SSH3-205ENST00000527821 GNAI2P04899 355 aa20.68■□□□□ 0.9
SSH3-205ENST00000527821 EIF6P56537 245 aaKnown RBP20.68■□□□□ 0.9
SSH3-205ENST00000527821 ZC3H12CQ9C0D7 883 aaKnown RBP20.68■□□□□ 0.9
SSH3-205ENST00000527821 G3V3G9 751 aa20.66■□□□□ 0.9
SSH3-205ENST00000527821 DDNO94850 711 aaPredicted RBP20.66■□□□□ 0.9
SSH3-205ENST00000527821 KCNJ4P48050 445 aa20.66■□□□□ 0.9
SSH3-205ENST00000527821 DCAF8Q5TAQ9 597 aa20.66■□□□□ 0.9
SSH3-205ENST00000527821 HELBQ8NG08 1087 aaPredicted RBP20.66■□□□□ 0.9
SSH3-205ENST00000527821 KLHDC4Q8TBB5 520 aa20.66■□□□□ 0.9
SSH3-205ENST00000527821 PUS3Q9BZE2 481 aaKnown RBP20.66■□□□□ 0.9
SSH3-205ENST00000527821 ZNRF3Q9ULT6 936 aa20.66■□□□□ 0.9
SSH3-205ENST00000527821 LEMD3Q9Y2U8 911 aa20.66■□□□□ 0.9
SSH3-205ENST00000527821 ZNF541Q9H0D2 1346 aa20.66■□□□□ 0.9
SSH3-205ENST00000527821 NMRK2Q9NPI5 230 aa20.65■□□□□ 0.9
SSH3-205ENST00000527821 ZNF804BA4D1E1 1349 aa20.64■□□□□ 0.89
SSH3-205ENST00000527821 WTIPA6NIX2 430 aaPredicted RBP20.64■□□□□ 0.89
SSH3-205ENST00000527821 ZBTB7BO15156 539 aaPredicted RBP20.64■□□□□ 0.89
SSH3-205ENST00000527821 TAF5LO75529 589 aa20.64■□□□□ 0.89
SSH3-205ENST00000527821 DOK7Q18PE1 504 aa20.64■□□□□ 0.89
SSH3-205ENST00000527821 DBNDD1Q9H9R9 158 aa20.64■□□□□ 0.89
SSH3-205ENST00000527821 RRAGCQ9HB90 399 aa20.64■□□□□ 0.89
SSH3-205ENST00000527821 A0A1B0GUL6 1792 aa20.64■□□□□ 0.89
SSH3-205ENST00000527821 RFX5P48382 616 aaPredicted RBP20.63■□□□□ 0.89
SSH3-205ENST00000527821 LRRC24Q50LG9 513 aa20.63■□□□□ 0.89
SSH3-205ENST00000527821 COG6Q9Y2V7 657 aa20.63■□□□□ 0.89
SSH3-205ENST00000527821 GJA3Q9Y6H8 435 aa20.63■□□□□ 0.89
SSH3-205ENST00000527821 MED23Q9ULK4 1368 aa20.62■□□□□ 0.89
SSH3-205ENST00000527821 SRGAP3O43295 1099 aa20.62■□□□□ 0.89
SSH3-205ENST00000527821 ECE2O60344 883 aa20.62■□□□□ 0.89
SSH3-205ENST00000527821 PTPN12Q05209 780 aaKnown RBP20.62■□□□□ 0.89
SSH3-205ENST00000527821 MVPQ14764 893 aaKnown RBP20.62■□□□□ 0.89
SSH3-205ENST00000527821 RIPOR2Q9Y4F9 1068 aa20.62■□□□□ 0.89
SSH3-205ENST00000527821 WDR90Q96KV7 1748 aa20.61■□□□□ 0.89
SSH3-205ENST00000527821 MROH5Q6ZUA9 1318 aa20.61■□□□□ 0.89
SSH3-205ENST00000527821 PDE3AQ14432 1141 aa20.61■□□□□ 0.89
SSH3-205ENST00000527821 METTL24Q5JXM2 366 aa20.61■□□□□ 0.89
SSH3-205ENST00000527821 GPC2Q8N158 579 aa20.61■□□□□ 0.89
SSH3-205ENST00000527821 C1orf115Q9H7X2 142 aa20.61■□□□□ 0.89
SSH3-205ENST00000527821 YDJCA8MPS7 323 aa20.6■□□□□ 0.89
SSH3-205ENST00000527821 SNAP23O00161 211 aa20.6■□□□□ 0.89
SSH3-205ENST00000527821 EYA2O00167 538 aa20.6■□□□□ 0.89
SSH3-205ENST00000527821 RAD17O75943 681 aa20.6■□□□□ 0.89
SSH3-205ENST00000527821 VEGFAP15692 232 aaPredicted RBP20.6■□□□□ 0.89
SSH3-205ENST00000527821 CXCL9Q07325 125 aa20.6■□□□□ 0.89
SSH3-205ENST00000527821 MTX1Q13505 466 aa20.6■□□□□ 0.89
SSH3-205ENST00000527821 CIAPIN1Q6FI81 312 aa20.6■□□□□ 0.89
SSH3-205ENST00000527821 SIL1Q9H173 461 aa20.6■□□□□ 0.89
SSH3-205ENST00000527821 DDX19BQ9UMR2 479 aa20.6■□□□□ 0.89
SSH3-205ENST00000527821 KIF3CO14782 793 aa20.59■□□□□ 0.89
SSH3-205ENST00000527821 TNIP1Q15025 636 aa20.59■□□□□ 0.89
SSH3-205ENST00000527821 C20orf194Q5TEA3 1177 aa20.59■□□□□ 0.89
SSH3-205ENST00000527821 PA2G4Q9UQ80 394 aaKnown RBP20.59■□□□□ 0.89
SSH3-205ENST00000527821 KLRK1P26718 216 aa20.58■□□□□ 0.89
SSH3-205ENST00000527821 TXNRD3Q86VQ6 643 aa20.58■□□□□ 0.89
SSH3-205ENST00000527821 C16orf71Q8IYS4 520 aaPredicted RBP20.58■□□□□ 0.89
SSH3-205ENST00000527821 L3MBTL3Q96JM7 780 aaPredicted RBP20.58■□□□□ 0.89
SSH3-205ENST00000527821 FBXO3Q9UK99 471 aa20.58■□□□□ 0.89
SSH3-205ENST00000527821 PNMA6EA0A0J9YXQ4 647 aa20.57■□□□□ 0.88
SSH3-205ENST00000527821 CHMP4BQ9H444 224 aaKnown RBP20.57■□□□□ 0.88
SSH3-205ENST00000527821 COPRSQ9NQ92 184 aa20.57■□□□□ 0.88
SSH3-205ENST00000527821 IQCA1LA6NCM1 817 aa20.56■□□□□ 0.88
SSH3-205ENST00000527821 POTECB2RU33 542 aa20.56■□□□□ 0.88
SSH3-205ENST00000527821 CIAO1O76071 339 aa20.56■□□□□ 0.88
SSH3-205ENST00000527821 PDE8BO95263 885 aa20.56■□□□□ 0.88
SSH3-205ENST00000527821 RRP1P56182 461 aaKnown RBP20.56■□□□□ 0.88
SSH3-205ENST00000527821 UBE4AQ14139 1066 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms