RNA–Protein interactions for RNA: ENST00000527718.1

PABPC4-222, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-222	ENST00000527718	BRWD3	Q6RI45	1802 aa		7.61	□□□□□ -1.19
PABPC4-222	ENST00000527718	LAMB4	A4D0S4	1761 aa		7.61	□□□□□ -1.19
PABPC4-222	ENST00000527718	CIAO1	O76071	339 aa		7.6	□□□□□ -1.19
PABPC4-222	ENST00000527718	ANXA1	P04083	346 aa		7.6	□□□□□ -1.19
PABPC4-222	ENST00000527718	PCCA	P05165	728 aa	Predicted RBP	7.6	□□□□□ -1.19
PABPC4-222	ENST00000527718	PDIA4	P13667	645 aa	Known RBP	7.6	□□□□□ -1.19
PABPC4-222	ENST00000527718	ATP6V1A	P38606	617 aa		7.6	□□□□□ -1.19
PABPC4-222	ENST00000527718	RBM25	P49756	843 aa	Known RBP	7.6	□□□□□ -1.19
PABPC4-222	ENST00000527718	ANAPC15	P60006	121 aa		7.6	□□□□□ -1.19
PABPC4-222	ENST00000527718	RABEP1	Q15276	862 aa		7.6	□□□□□ -1.19
PABPC4-222	ENST00000527718	PROSER3	Q2NL68	480 aa		7.6	□□□□□ -1.19
PABPC4-222	ENST00000527718	CWF19L2	Q2TBE0	894 aa	Known RBP	7.6	□□□□□ -1.19
PABPC4-222	ENST00000527718	RABL6	Q3YEC7	729 aa	Predicted RBP	7.6	□□□□□ -1.19
PABPC4-222	ENST00000527718	PPP1R15B	Q5SWA1	713 aa		7.6	□□□□□ -1.19
PABPC4-222	ENST00000527718	UBE3B	Q7Z3V4	1068 aa		7.6	□□□□□ -1.19
PABPC4-222	ENST00000527718	SEPT12	Q8IYM1	358 aa		7.6	□□□□□ -1.19
PABPC4-222	ENST00000527718	WNT2B	Q93097	391 aa		7.6	□□□□□ -1.19
PABPC4-222	ENST00000527718	EVI5L	Q96CN4	794 aa		7.6	□□□□□ -1.19
PABPC4-222	ENST00000527718	NYX	Q9GZU5	481 aa		7.6	□□□□□ -1.19
PABPC4-222	ENST00000527718	BICC1	Q9H694	974 aa	Known RBP	7.6	□□□□□ -1.19
PABPC4-222	ENST00000527718	DIAPH3	Q9NSV4	1193 aa		7.6	□□□□□ -1.19
PABPC4-222	ENST00000527718	CCDC87	Q9NVE4	849 aa		7.6	□□□□□ -1.19
PABPC4-222	ENST00000527718	CHMP3	Q9Y3E7	222 aa		7.6	□□□□□ -1.19
PABPC4-222	ENST00000527718	RAD50	Q92878	1312 aa		7.59	□□□□□ -1.19
PABPC4-222	ENST00000527718	CDHR2	Q9BYE9	1310 aa		7.59	□□□□□ -1.19
PABPC4-222	ENST00000527718	USP42	Q9H9J4	1324 aa	Known RBP	7.59	□□□□□ -1.19
PABPC4-222	ENST00000527718	KCP	Q6ZWJ8	1503 aa		7.59	□□□□□ -1.19
PABPC4-222	ENST00000527718	LOC102724428	A0A0B4J2F2	783 aa		7.59	□□□□□ -1.19
PABPC4-222	ENST00000527718	PNMA6E	A0A0J9YXQ4	647 aa		7.59	□□□□□ -1.19
PABPC4-222	ENST00000527718		H7C1W4	665 aa		7.59	□□□□□ -1.19
PABPC4-222	ENST00000527718	SOCS7	O14512	581 aa		7.59	□□□□□ -1.19
PABPC4-222	ENST00000527718	IGKV5-2	P06315	115 aa		7.59	□□□□□ -1.19
PABPC4-222	ENST00000527718	CYP19A1	P11511	503 aa	Predicted RBP	7.59	□□□□□ -1.19
PABPC4-222	ENST00000527718	SIK1	P57059	783 aa		7.59	□□□□□ -1.19
PABPC4-222	ENST00000527718	IFIT5	Q13325	482 aa	Known RBP	7.59	□□□□□ -1.19
PABPC4-222	ENST00000527718	RC3H1	Q5TC82	1133 aa	Known RBP	7.59	□□□□□ -1.19
PABPC4-222	ENST00000527718	RNF20	Q5VTR2	975 aa		7.59	□□□□□ -1.19
PABPC4-222	ENST00000527718	TBC1D9	Q6ZT07	1266 aa		7.59	□□□□□ -1.19
PABPC4-222	ENST00000527718	DZIP3	Q86Y13	1208 aa	Known RBP	7.59	□□□□□ -1.19
PABPC4-222	ENST00000527718	DNAJC10	Q8IXB1	793 aa		7.59	□□□□□ -1.19
PABPC4-222	ENST00000527718	RILPL2	Q969X0	211 aa		7.59	□□□□□ -1.19
PABPC4-222	ENST00000527718	PLA2G12B	Q9BX93	195 aa		7.59	□□□□□ -1.19
PABPC4-222	ENST00000527718	NBPF3	Q9H094	633 aa		7.59	□□□□□ -1.19
PABPC4-222	ENST00000527718	CEP126	Q9P2H0	1117 aa		7.59	□□□□□ -1.19
PABPC4-222	ENST00000527718	ASAP1	Q9ULH1	1129 aa		7.59	□□□□□ -1.19
PABPC4-222	ENST00000527718	THSD7A	Q9UPZ6	1657 aa		7.59	□□□□□ -1.19
PABPC4-222	ENST00000527718	RFX7	Q2KHR2	1363 aa		7.59	□□□□□ -1.2
PABPC4-222	ENST00000527718	PALLD	Q8WX93	1383 aa		7.59	□□□□□ -1.2
PABPC4-222	ENST00000527718	ANKRD18B	A2A2Z9	1011 aa		7.58	□□□□□ -1.2
PABPC4-222	ENST00000527718	A1BG	P04217	495 aa		7.58	□□□□□ -1.2
PABPC4-222	ENST00000527718	CCDC158	Q5M9N0	1113 aa		7.58	□□□□□ -1.2
PABPC4-222	ENST00000527718	GORAB	Q5T7V8	394 aa		7.58	□□□□□ -1.2
PABPC4-222	ENST00000527718	AACS	Q86V21	672 aa		7.58	□□□□□ -1.2
PABPC4-222	ENST00000527718	UPF1	Q92900	1129 aa	Known RBP eCLIP	7.58	□□□□□ -1.2
PABPC4-222	ENST00000527718	SNX21	Q969T3	373 aa		7.58	□□□□□ -1.2
PABPC4-222	ENST00000527718	SUCLG2	Q96I99	432 aa		7.58	□□□□□ -1.2
PABPC4-222	ENST00000527718	ISCA1	Q9BUE6	129 aa		7.58	□□□□□ -1.2
PABPC4-222	ENST00000527718	ADAM33	Q9BZ11	813 aa		7.58	□□□□□ -1.2
PABPC4-222	ENST00000527718	ZBTB3	Q9H5J0	574 aa		7.58	□□□□□ -1.2
PABPC4-222	ENST00000527718	PAPPA	Q13219	1627 aa		7.58	□□□□□ -1.2
PABPC4-222	ENST00000527718	UBR2	Q8IWV8	1755 aa		7.57	□□□□□ -1.2
PABPC4-222	ENST00000527718	PRAMEF22	A3QJZ6	481 aa		7.57	□□□□□ -1.2
PABPC4-222	ENST00000527718	NBPF26	B4DH59	902 aa		7.57	□□□□□ -1.2
PABPC4-222	ENST00000527718	PDE8A	O60658	829 aa		7.57	□□□□□ -1.2
PABPC4-222	ENST00000527718	IGSF3	O75054	1194 aa		7.57	□□□□□ -1.2
PABPC4-222	ENST00000527718	ZPR1	O75312	459 aa		7.57	□□□□□ -1.2
PABPC4-222	ENST00000527718	ZKSCAN1	P17029	563 aa	Predicted RBP	7.57	□□□□□ -1.2
PABPC4-222	ENST00000527718	SDS	P20132	328 aa		7.57	□□□□□ -1.2
PABPC4-222	ENST00000527718	GTF2E1	P29083	439 aa	Predicted RBP	7.57	□□□□□ -1.2
PABPC4-222	ENST00000527718	CCDC152	Q4G0S7	254 aa		7.57	□□□□□ -1.2
PABPC4-222	ENST00000527718	NBPF14	Q5TI25	921 aa		7.57	□□□□□ -1.2
PABPC4-222	ENST00000527718	ZSCAN25	Q6NSZ9	544 aa		7.57	□□□□□ -1.2
PABPC4-222	ENST00000527718	NBPF10	Q6P3W6	841 aa	Known RBP	7.57	□□□□□ -1.2
PABPC4-222	ENST00000527718	FAM196A	Q6ZSG2	479 aa		7.57	□□□□□ -1.2
PABPC4-222	ENST00000527718	LRP10	Q7Z4F1	713 aa		7.57	□□□□□ -1.2
PABPC4-222	ENST00000527718	NBPF15	Q8N660	670 aa		7.57	□□□□□ -1.2
PABPC4-222	ENST00000527718	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	7.57	□□□□□ -1.2
PABPC4-222	ENST00000527718	ZDHHC16	Q969W1	377 aa		7.57	□□□□□ -1.2
PABPC4-222	ENST00000527718	UTP14A	Q9BVJ6	771 aa	Known RBP	7.57	□□□□□ -1.2
PABPC4-222	ENST00000527718	TRMT112	Q9UI30	125 aa	Known RBP	7.57	□□□□□ -1.2
PABPC4-222	ENST00000527718	ABCC12	Q96J65	1359 aa		7.57	□□□□□ -1.2
PABPC4-222	ENST00000527718	WNK3	Q9BYP7	1800 aa		7.57	□□□□□ -1.2
PABPC4-222	ENST00000527718	SH3TC1	Q8TE82	1336 aa		7.56	□□□□□ -1.2
PABPC4-222	ENST00000527718	CNTNAP4	Q9C0A0	1308 aa		7.56	□□□□□ -1.2
PABPC4-222	ENST00000527718	ATP5J2-PTCD1	G3V325	749 aa		7.56	□□□□□ -1.2
PABPC4-222	ENST00000527718	EYA2	O00167	538 aa		7.56	□□□□□ -1.2
PABPC4-222	ENST00000527718	NPHP1	O15259	732 aa		7.56	□□□□□ -1.2
PABPC4-222	ENST00000527718	IGHMBP2	P38935	993 aa	Known RBP	7.56	□□□□□ -1.2
PABPC4-222	ENST00000527718	TTF1	Q15361	905 aa	Predicted RBP	7.56	□□□□□ -1.2
PABPC4-222	ENST00000527718	SLC27A3	Q5K4L6	730 aa		7.56	□□□□□ -1.2
PABPC4-222	ENST00000527718	TMED8	Q6PL24	325 aa	Predicted RBP	7.56	□□□□□ -1.2
PABPC4-222	ENST00000527718	LMBR1L	Q6UX01	489 aa		7.56	□□□□□ -1.2
PABPC4-222	ENST00000527718	KRT27	Q7Z3Y8	459 aa		7.56	□□□□□ -1.2
PABPC4-222	ENST00000527718	MARCH10	Q8NA82	808 aa	Predicted RBP	7.56	□□□□□ -1.2
PABPC4-222	ENST00000527718	CDC5L	Q99459	802 aa	Known RBP	7.56	□□□□□ -1.2
PABPC4-222	ENST00000527718	IL1RAPL2	Q9NP60	686 aa		7.56	□□□□□ -1.2
PABPC4-222	ENST00000527718	RYDEN	Q9NUL5	291 aa	Known RBP	7.56	□□□□□ -1.2
PABPC4-222	ENST00000527718	EP400	Q96L91	3159 aa		7.56	□□□□□ -1.2
PABPC4-222	ENST00000527718	MROH5	Q6ZUA9	1318 aa		7.55	□□□□□ -1.2
PABPC4-222	ENST00000527718	PPP1R3G	B7ZBB8	358 aa		7.55	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms