RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 GPR101Q96P66 508 aaPredicted RBP28.78■■■□□ 2.2
TRAPPC4-208ENST00000527680 ZNF408Q9H9D4 720 aa28.78■■■□□ 2.2
TRAPPC4-208ENST00000527680 PRDM10Q9NQV6 1147 aa28.78■■■□□ 2.2
TRAPPC4-208ENST00000527680 PGAP2Q9UHJ9 254 aa28.78■■■□□ 2.2
TRAPPC4-208ENST00000527680 LRRC37AA6NMS7 1700 aa28.77■■■□□ 2.2
TRAPPC4-208ENST00000527680 DUOX1Q9NRD9 1551 aa28.77■■■□□ 2.2
TRAPPC4-208ENST00000527680 KSR2Q6VAB6 950 aa28.77■■■□□ 2.2
TRAPPC4-208ENST00000527680 CDC37L1Q7L3B6 337 aa28.77■■■□□ 2.2
TRAPPC4-208ENST00000527680 DPF2Q92785 391 aa28.77■■■□□ 2.2
TRAPPC4-208ENST00000527680 TLL2Q9Y6L7 1015 aa28.77■■■□□ 2.2
TRAPPC4-208ENST00000527680 PI4KAP2A4QPH2 592 aa28.76■■■□□ 2.19
TRAPPC4-208ENST00000527680 LBX1P52954 281 aa28.76■■■□□ 2.19
TRAPPC4-208ENST00000527680 NEXNQ0ZGT2 675 aa28.76■■■□□ 2.19
TRAPPC4-208ENST00000527680 WWC1Q8IX03 1113 aa28.76■■■□□ 2.19
TRAPPC4-208ENST00000527680 PI4KAP1Q8N8J0 262 aa28.76■■■□□ 2.19
TRAPPC4-208ENST00000527680 BEGAINQ9BUH8 593 aa28.76■■■□□ 2.19
TRAPPC4-208ENST00000527680 KCNQ5Q9NR82 932 aa28.76■■■□□ 2.19
TRAPPC4-208ENST00000527680 UFL1O94874 794 aa28.75■■■□□ 2.19
TRAPPC4-208ENST00000527680 RBM26Q5T8P6 1007 aaKnown RBP28.75■■■□□ 2.19
TRAPPC4-208ENST00000527680 SAMD7Q7Z3H4 446 aa28.75■■■□□ 2.19
TRAPPC4-208ENST00000527680 GGA1Q9UJY5 639 aa28.75■■■□□ 2.19
TRAPPC4-208ENST00000527680 CCDC27Q2M243 656 aa28.74■■■□□ 2.19
TRAPPC4-208ENST00000527680 TWISTNBQ3B726 338 aaPredicted RBP28.74■■■□□ 2.19
TRAPPC4-208ENST00000527680 ANKRD18AQ8IVF6 992 aa28.74■■■□□ 2.19
TRAPPC4-208ENST00000527680 PODXL2Q9NZ53 605 aa28.74■■■□□ 2.19
TRAPPC4-208ENST00000527680 TBC1D10BQ4KMP7 808 aaPredicted RBP28.73■■■□□ 2.19
TRAPPC4-208ENST00000527680 USP48Q86UV5 1035 aa28.73■■■□□ 2.19
TRAPPC4-208ENST00000527680 COL4A1P02462 1669 aa28.73■■■□□ 2.19
TRAPPC4-208ENST00000527680 SLC4A2P04920 1241 aa28.72■■■□□ 2.19
TRAPPC4-208ENST00000527680 RPS12P25398 132 aaKnown RBP28.72■■■□□ 2.19
TRAPPC4-208ENST00000527680 MRS2Q9HD23 443 aa28.72■■■□□ 2.19
TRAPPC4-208ENST00000527680 SAPCD2Q86UD0 394 aa28.71■■■□□ 2.19
TRAPPC4-208ENST00000527680 SALL2Q9Y467 1007 aaPredicted RBP28.71■■■□□ 2.19
TRAPPC4-208ENST00000527680 IGKV5-2P06315 115 aa28.7■■■□□ 2.18
TRAPPC4-208ENST00000527680 ANP32CO43423 234 aa28.69■■■□□ 2.18
TRAPPC4-208ENST00000527680 ZEB1P37275 1124 aaPredicted RBP28.69■■■□□ 2.18
TRAPPC4-208ENST00000527680 CDC5LQ99459 802 aaKnown RBP28.69■■■□□ 2.18
TRAPPC4-208ENST00000527680 RTL9Q8NET4 1388 aa28.68■■■□□ 2.18
TRAPPC4-208ENST00000527680 HSPA8P11142 646 aaKnown RBP28.68■■■□□ 2.18
TRAPPC4-208ENST00000527680 CTSWP56202 376 aa28.68■■■□□ 2.18
TRAPPC4-208ENST00000527680 CWF19L2Q2TBE0 894 aaKnown RBP28.68■■■□□ 2.18
TRAPPC4-208ENST00000527680 G2E3Q7L622 706 aa28.68■■■□□ 2.18
TRAPPC4-208ENST00000527680 DCPSQ96C86 337 aaKnown RBP28.68■■■□□ 2.18
TRAPPC4-208ENST00000527680 AOC2O75106 756 aa28.67■■■□□ 2.18
TRAPPC4-208ENST00000527680 VIL1P09327 827 aaKnown RBP28.67■■■□□ 2.18
TRAPPC4-208ENST00000527680 MAP2K2P36507 400 aa28.67■■■□□ 2.18
TRAPPC4-208ENST00000527680 KRT26Q7Z3Y9 468 aa28.67■■■□□ 2.18
TRAPPC4-208ENST00000527680 XDHP47989 1333 aa28.67■■■□□ 2.18
TRAPPC4-208ENST00000527680 EGFRP00533 1210 aa28.66■■■□□ 2.18
TRAPPC4-208ENST00000527680 ATP2B4P23634 1241 aa28.66■■■□□ 2.18
TRAPPC4-208ENST00000527680 TTLL11Q8NHH1 800 aa28.66■■■□□ 2.18
TRAPPC4-208ENST00000527680 IL16Q14005 1332 aa28.66■■■□□ 2.18
TRAPPC4-208ENST00000527680 POLR2AP24928 1970 aaKnown RBP28.65■■■□□ 2.18
TRAPPC4-208ENST00000527680 NEURL1BA8MQ27 555 aa28.65■■■□□ 2.18
TRAPPC4-208ENST00000527680 DLK2Q6UY11 383 aa28.65■■■□□ 2.18
TRAPPC4-208ENST00000527680 UBE3BQ7Z3V4 1068 aa28.64■■■□□ 2.18
TRAPPC4-208ENST00000527680 HHIPL1Q96JK4 782 aa28.64■■■□□ 2.18
TRAPPC4-208ENST00000527680 GREM2Q9H772 168 aa28.64■■■□□ 2.18
TRAPPC4-208ENST00000527680 KIF4BQ2VIQ3 1234 aa28.63■■■□□ 2.17
TRAPPC4-208ENST00000527680 FKBP5Q13451 457 aaPredicted RBP28.62■■■□□ 2.17
TRAPPC4-208ENST00000527680 BSDC1Q9NW68 430 aaPredicted RBP28.62■■■□□ 2.17
TRAPPC4-208ENST00000527680 H7C1W4 665 aa28.61■■■□□ 2.17
TRAPPC4-208ENST00000527680 HUNKP57058 714 aa28.61■■■□□ 2.17
TRAPPC4-208ENST00000527680 FLIIQ13045 1269 aa28.61■■■□□ 2.17
TRAPPC4-208ENST00000527680 NCBP3Q53F19 620 aaKnown RBP28.61■■■□□ 2.17
TRAPPC4-208ENST00000527680 RSBN1LQ6PCB5 846 aaPredicted RBP28.61■■■□□ 2.17
TRAPPC4-208ENST00000527680 MINPP1Q9UNW1 487 aa28.61■■■□□ 2.17
TRAPPC4-208ENST00000527680 ZNF316A6NFI3 1004 aaPredicted RBP28.6■■■□□ 2.17
TRAPPC4-208ENST00000527680 PODNQ7Z5L7 613 aa28.6■■■□□ 2.17
TRAPPC4-208ENST00000527680 SULF1Q8IWU6 871 aa28.6■■■□□ 2.17
TRAPPC4-208ENST00000527680 C2orf69Q8N8R5 385 aa28.6■■■□□ 2.17
TRAPPC4-208ENST00000527680 AGBL3Q8NEM8 1001 aa28.6■■■□□ 2.17
TRAPPC4-208ENST00000527680 SCN9AQ15858 1988 aa28.6■■■□□ 2.17
TRAPPC4-208ENST00000527680 ADM5C9JUS6 153 aa28.59■■■□□ 2.17
TRAPPC4-208ENST00000527680 IGHMBP2P38935 993 aaKnown RBP28.59■■■□□ 2.17
TRAPPC4-208ENST00000527680 WDR63Q8IWG1 891 aa28.59■■■□□ 2.17
TRAPPC4-208ENST00000527680 MYH16Q9H6N6 1097 aa28.59■■■□□ 2.17
TRAPPC4-208ENST00000527680 TSKSQ9UJT2 592 aa28.59■■■□□ 2.17
TRAPPC4-208ENST00000527680 FANCIQ9NVI1 1328 aa28.59■■■□□ 2.17
TRAPPC4-208ENST00000527680 USP17L3A6NCW0 530 aa28.58■■■□□ 2.17
TRAPPC4-208ENST00000527680 USP17L4A6NCW7 530 aa28.58■■■□□ 2.17
TRAPPC4-208ENST00000527680 GCKRQ14397 625 aa28.58■■■□□ 2.17
TRAPPC4-208ENST00000527680 USP17L1Q7RTZ2 530 aa28.58■■■□□ 2.17
TRAPPC4-208ENST00000527680 DNAAF4Q8WXU2 420 aa28.58■■■□□ 2.17
TRAPPC4-208ENST00000527680 GBA2Q9HCG7 927 aaPredicted RBP28.58■■■□□ 2.17
TRAPPC4-208ENST00000527680 WTIPA6NIX2 430 aaPredicted RBP28.57■■■□□ 2.16
TRAPPC4-208ENST00000527680 GGA3Q9NZ52 723 aa28.57■■■□□ 2.16
TRAPPC4-208ENST00000527680 MYH3P11055 1940 aa28.57■■■□□ 2.16
TRAPPC4-208ENST00000527680 VAMP4O75379 141 aa28.56■■■□□ 2.16
TRAPPC4-208ENST00000527680 USP17L8P0C7I0 530 aa28.56■■■□□ 2.16
TRAPPC4-208ENST00000527680 CCT4P50991 539 aaKnown RBP28.56■■■□□ 2.16
TRAPPC4-208ENST00000527680 EXOSC9Q06265 439 aaKnown RBP28.56■■■□□ 2.16
TRAPPC4-208ENST00000527680 SCARF1Q14162 830 aa28.56■■■□□ 2.16
TRAPPC4-208ENST00000527680 FBXW7Q969H0 707 aa28.56■■■□□ 2.16
TRAPPC4-208ENST00000527680 NOGQ13253 232 aa28.55■■■□□ 2.16
TRAPPC4-208ENST00000527680 MPHOSPH8Q99549 860 aa28.55■■■□□ 2.16
TRAPPC4-208ENST00000527680 ASTN2O75129 1339 aaPredicted RBP28.54■■■□□ 2.16
TRAPPC4-208ENST00000527680 ITGA6P23229 1130 aa28.54■■■□□ 2.16
TRAPPC4-208ENST00000527680 BRPF1P55201 1214 aaPredicted RBP28.54■■■□□ 2.16
TRAPPC4-208ENST00000527680 ZNF280AP59817 542 aaPredicted RBP28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms