RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 TNIP1Q15025 636 aa24.41■■□□□ 1.5
PKP3-204ENST00000526971 G2E3Q7L622 706 aa24.41■■□□□ 1.5
PKP3-204ENST00000526971 FAM89AQ96GI7 184 aa24.41■■□□□ 1.5
PKP3-204ENST00000526971 KSR2Q6VAB6 950 aa24.4■■□□□ 1.5
PKP3-204ENST00000526971 CNOT7Q9UIV1 285 aaKnown RBP24.4■■□□□ 1.5
PKP3-204ENST00000526971 ZBTB12Q9Y330 459 aaPredicted RBP24.4■■□□□ 1.5
PKP3-204ENST00000526971 SF3B3Q15393 1217 aaKnown RBP24.39■■□□□ 1.49
PKP3-204ENST00000526971 DLK2Q6UY11 383 aa24.39■■□□□ 1.49
PKP3-204ENST00000526971 TMC4Q7Z404 712 aa24.39■■□□□ 1.49
PKP3-204ENST00000526971 MICALL2Q8IY33 904 aa24.39■■□□□ 1.49
PKP3-204ENST00000526971 CDCA7LQ96GN5 454 aa24.39■■□□□ 1.49
PKP3-204ENST00000526971 MYD88Q99836 296 aa24.39■■□□□ 1.49
PKP3-204ENST00000526971 METTL22Q9BUU2 404 aaPredicted RBP24.39■■□□□ 1.49
PKP3-204ENST00000526971 MAP3K2Q9Y2U5 619 aa24.39■■□□□ 1.49
PKP3-204ENST00000526971 PI4KAP2A4QPH2 592 aa24.38■■□□□ 1.49
PKP3-204ENST00000526971 RTL5Q5HYW3 569 aaPredicted RBP24.38■■□□□ 1.49
PKP3-204ENST00000526971 PI4KAP1Q8N8J0 262 aa24.38■■□□□ 1.49
PKP3-204ENST00000526971 ZC3H15Q8WU90 426 aaKnown RBP24.38■■□□□ 1.49
PKP3-204ENST00000526971 ZNF408Q9H9D4 720 aa24.38■■□□□ 1.49
PKP3-204ENST00000526971 DBNDD1Q9H9R9 158 aa24.38■■□□□ 1.49
PKP3-204ENST00000526971 PSMD14O00487 310 aa24.37■■□□□ 1.49
PKP3-204ENST00000526971 EGFRP00533 1210 aa24.37■■□□□ 1.49
PKP3-204ENST00000526971 MAP2K2P36507 400 aa24.37■■□□□ 1.49
PKP3-204ENST00000526971 GPSM2P81274 684 aa24.37■■□□□ 1.49
PKP3-204ENST00000526971 FLIIQ13045 1269 aa24.37■■□□□ 1.49
PKP3-204ENST00000526971 POLLQ9UGP5 575 aa24.37■■□□□ 1.49
PKP3-204ENST00000526971 TRMT2AQ8IZ69 625 aaKnown RBP24.36■■□□□ 1.49
PKP3-204ENST00000526971 BEGAINQ9BUH8 593 aa24.36■■□□□ 1.49
PKP3-204ENST00000526971 NSFL1CQ9UNZ2 370 aaKnown RBP24.36■■□□□ 1.49
PKP3-204ENST00000526971 RTL9Q8NET4 1388 aa24.36■■□□□ 1.49
PKP3-204ENST00000526971 PSME4Q14997 1843 aa24.35■■□□□ 1.49
PKP3-204ENST00000526971 RIMBP2O15034 1052 aa24.35■■□□□ 1.49
PKP3-204ENST00000526971 WASHC4Q2M389 1173 aa24.35■■□□□ 1.49
PKP3-204ENST00000526971 CDC37L1Q7L3B6 337 aa24.35■■□□□ 1.49
PKP3-204ENST00000526971 SAMD7Q7Z3H4 446 aa24.35■■□□□ 1.49
PKP3-204ENST00000526971 HHIPL1Q96JK4 782 aa24.35■■□□□ 1.49
PKP3-204ENST00000526971 KCNQ5Q9NR82 932 aa24.35■■□□□ 1.49
PKP3-204ENST00000526971 USP48Q86UV5 1035 aa24.34■■□□□ 1.49
PKP3-204ENST00000526971 CCDC191Q8NCU4 936 aa24.34■■□□□ 1.49
PKP3-204ENST00000526971 ZIC5Q96T25 663 aa24.34■■□□□ 1.49
PKP3-204ENST00000526971 H7C1D1 291 aa24.33■■□□□ 1.49
PKP3-204ENST00000526971 IRS4O14654 1257 aaPredicted RBP24.33■■□□□ 1.49
PKP3-204ENST00000526971 FKBP5Q13451 457 aaPredicted RBP24.33■■□□□ 1.49
PKP3-204ENST00000526971 DPF2Q92785 391 aa24.33■■□□□ 1.49
PKP3-204ENST00000526971 C6orf229H3BNL8 230 aa24.32■■□□□ 1.48
PKP3-204ENST00000526971 ECE2O60344 883 aa24.32■■□□□ 1.48
PKP3-204ENST00000526971 NEXNQ0ZGT2 675 aa24.32■■□□□ 1.48
PKP3-204ENST00000526971 DOK7Q18PE1 504 aa24.32■■□□□ 1.48
PKP3-204ENST00000526971 TBC1D10BQ4KMP7 808 aaPredicted RBP24.32■■□□□ 1.48
PKP3-204ENST00000526971 ZBTB38Q8NAP3 1195 aaPredicted RBP24.32■■□□□ 1.48
PKP3-204ENST00000526971 CWC25Q9NXE8 425 aaPredicted RBP24.32■■□□□ 1.48
PKP3-204ENST00000526971 IGKV5-2P06315 115 aa24.31■■□□□ 1.48
PKP3-204ENST00000526971 BRPF1P55201 1214 aaPredicted RBP24.31■■□□□ 1.48
PKP3-204ENST00000526971 TBC1D16Q8TBP0 767 aa24.31■■□□□ 1.48
PKP3-204ENST00000526971 SEC31BQ9NQW1 1179 aa24.3■■□□□ 1.48
PKP3-204ENST00000526971 SPEF2Q9C093 1822 aa24.29■■□□□ 1.48
PKP3-204ENST00000526971 ADM5C9JUS6 153 aa24.29■■□□□ 1.48
PKP3-204ENST00000526971 PCCAP05165 728 aaPredicted RBP24.29■■□□□ 1.48
PKP3-204ENST00000526971 HNRNPUQ00839 825 aaKnown RBP eCLIP24.29■■□□□ 1.48
PKP3-204ENST00000526971 FAM161AQ3B820 660 aa24.29■■□□□ 1.48
PKP3-204ENST00000526971 DNAAF4Q8WXU2 420 aa24.29■■□□□ 1.48
PKP3-204ENST00000526971 HUNKP57058 714 aa24.28■■□□□ 1.48
PKP3-204ENST00000526971 RPS8P62241 208 aaKnown RBP24.28■■□□□ 1.48
PKP3-204ENST00000526971 ZNF646O15015 1829 aaPredicted RBP24.27■■□□□ 1.48
PKP3-204ENST00000526971 NEURL1BA8MQ27 555 aa24.27■■□□□ 1.48
PKP3-204ENST00000526971 CWF19L2Q2TBE0 894 aaKnown RBP24.27■■□□□ 1.48
PKP3-204ENST00000526971 KRT26Q7Z3Y9 468 aa24.27■■□□□ 1.48
PKP3-204ENST00000526971 MYH3P11055 1940 aa24.27■■□□□ 1.48
PKP3-204ENST00000526971 CCDC85CA6NKD9 419 aa24.26■■□□□ 1.47
PKP3-204ENST00000526971 CA12O43570 354 aa24.26■■□□□ 1.47
PKP3-204ENST00000526971 HSP90B1P14625 803 aaKnown RBP24.26■■□□□ 1.47
PKP3-204ENST00000526971 RPS12P25398 132 aaKnown RBP24.26■■□□□ 1.47
PKP3-204ENST00000526971 RBM26Q5T8P6 1007 aaKnown RBP24.26■■□□□ 1.47
PKP3-204ENST00000526971 MRPL50Q8N5N7 158 aaKnown RBP24.26■■□□□ 1.47
PKP3-204ENST00000526971 JARID2Q92833 1246 aaPredicted RBP24.26■■□□□ 1.47
PKP3-204ENST00000526971 EYA3Q99504 573 aa24.26■■□□□ 1.47
PKP3-204ENST00000526971 ASTN2O75129 1339 aaPredicted RBP24.26■■□□□ 1.47
PKP3-204ENST00000526971 FAM155AB1AL88 458 aaPredicted RBP24.25■■□□□ 1.47
PKP3-204ENST00000526971 CT47B1P0C2W7 299 aaPredicted RBP24.25■■□□□ 1.47
PKP3-204ENST00000526971 LINS1Q8NG48 757 aa24.25■■□□□ 1.47
PKP3-204ENST00000526971 SSH1Q8WYL5 1049 aa24.25■■□□□ 1.47
PKP3-204ENST00000526971 PODXL2Q9NZ53 605 aa24.25■■□□□ 1.47
PKP3-204ENST00000526971 AKAP11Q9UKA4 1901 aa24.24■■□□□ 1.47
PKP3-204ENST00000526971 F6X3S4 739 aa24.24■■□□□ 1.47
PKP3-204ENST00000526971 UFL1O94874 794 aa24.24■■□□□ 1.47
PKP3-204ENST00000526971 NOGQ13253 232 aa24.24■■□□□ 1.47
PKP3-204ENST00000526971 KIF4BQ2VIQ3 1234 aa24.24■■□□□ 1.47
PKP3-204ENST00000526971 MCOLN1Q9GZU1 580 aa24.24■■□□□ 1.47
PKP3-204ENST00000526971 GBA2Q9HCG7 927 aaPredicted RBP24.24■■□□□ 1.47
PKP3-204ENST00000526971 VIL1P09327 827 aaKnown RBP24.23■■□□□ 1.47
PKP3-204ENST00000526971 GCKRQ14397 625 aa24.23■■□□□ 1.47
PKP3-204ENST00000526971 ALDH1L2Q3SY69 923 aa24.23■■□□□ 1.47
PKP3-204ENST00000526971 CCDC85AQ96PX6 553 aaPredicted RBP24.23■■□□□ 1.47
PKP3-204ENST00000526971 ZNF609O15014 1411 aa24.23■■□□□ 1.47
PKP3-204ENST00000526971 GGA3Q9NZ52 723 aa24.22■■□□□ 1.47
PKP3-204ENST00000526971 H7C1W4 665 aa24.21■■□□□ 1.47
PKP3-204ENST00000526971 PDE8AO60658 829 aa24.21■■□□□ 1.47
PKP3-204ENST00000526971 BEND3Q5T5X7 828 aa24.21■■□□□ 1.47
PKP3-204ENST00000526971 RGMBQ6NW40 437 aa24.21■■□□□ 1.47
PKP3-204ENST00000526971 DCPSQ96C86 337 aaKnown RBP24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms