RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 PHAXQ9H814 394 aaKnown RBP24.3■■□□□ 1.48
CAPN1-206ENST00000526966 TSKSQ9UJT2 592 aa24.3■■□□□ 1.48
CAPN1-206ENST00000526966 PRKRIP1Q9H875 184 aaPredicted RBP24.29■■□□□ 1.48
CAPN1-206ENST00000526966 KCNQ5Q9NR82 932 aa24.29■■□□□ 1.48
CAPN1-206ENST00000526966 ZNF609O15014 1411 aa24.28■■□□□ 1.48
CAPN1-206ENST00000526966 GNAI1P63096 354 aa24.28■■□□□ 1.48
CAPN1-206ENST00000526966 DOK7Q18PE1 504 aa24.28■■□□□ 1.48
CAPN1-206ENST00000526966 TBC1D10BQ4KMP7 808 aaPredicted RBP24.28■■□□□ 1.48
CAPN1-206ENST00000526966 SEC31BQ9NQW1 1179 aa24.28■■□□□ 1.48
CAPN1-206ENST00000526966 MYH3P11055 1940 aa24.27■■□□□ 1.48
CAPN1-206ENST00000526966 HSP90B1P14625 803 aaKnown RBP24.27■■□□□ 1.48
CAPN1-206ENST00000526966 DLK2Q6UY11 383 aa24.27■■□□□ 1.48
CAPN1-206ENST00000526966 CCDC191Q8NCU4 936 aa24.27■■□□□ 1.48
CAPN1-206ENST00000526966 APAF1O14727 1248 aa24.26■■□□□ 1.47
CAPN1-206ENST00000526966 PCCAP05165 728 aaPredicted RBP24.26■■□□□ 1.47
CAPN1-206ENST00000526966 HUNKP57058 714 aa24.26■■□□□ 1.47
CAPN1-206ENST00000526966 CALD1Q05682 793 aaKnown RBP24.26■■□□□ 1.47
CAPN1-206ENST00000526966 NOGQ13253 232 aa24.26■■□□□ 1.47
CAPN1-206ENST00000526966 KRT26Q7Z3Y9 468 aa24.26■■□□□ 1.47
CAPN1-206ENST00000526966 MYD88Q99836 296 aa24.26■■□□□ 1.47
CAPN1-206ENST00000526966 VIL1P09327 827 aaKnown RBP24.25■■□□□ 1.47
CAPN1-206ENST00000526966 ZC3H12CQ9C0D7 883 aaKnown RBP24.25■■□□□ 1.47
CAPN1-206ENST00000526966 ELL2O00472 640 aaPredicted RBP24.24■■□□□ 1.47
CAPN1-206ENST00000526966 UFL1O94874 794 aa24.24■■□□□ 1.47
CAPN1-206ENST00000526966 CCDC152Q4G0S7 254 aa24.24■■□□□ 1.47
CAPN1-206ENST00000526966 ZIC5Q96T25 663 aa24.24■■□□□ 1.47
CAPN1-206ENST00000526966 PDE8AO60658 829 aa24.23■■□□□ 1.47
CAPN1-206ENST00000526966 KIF4BQ2VIQ3 1234 aa24.23■■□□□ 1.47
CAPN1-206ENST00000526966 C8orf58Q8NAV2 365 aa24.23■■□□□ 1.47
CAPN1-206ENST00000526966 DCPSQ96C86 337 aaKnown RBP24.23■■□□□ 1.47
CAPN1-206ENST00000526966 GBA2Q9HCG7 927 aaPredicted RBP24.23■■□□□ 1.47
CAPN1-206ENST00000526966 CWC25Q9NXE8 425 aaPredicted RBP24.23■■□□□ 1.47
CAPN1-206ENST00000526966 GGA1Q9UJY5 639 aa24.23■■□□□ 1.47
CAPN1-206ENST00000526966 SPEF2Q9C093 1822 aa24.22■■□□□ 1.47
CAPN1-206ENST00000526966 FAM155AB1AL88 458 aaPredicted RBP24.22■■□□□ 1.47
CAPN1-206ENST00000526966 ADM5C9JUS6 153 aa24.22■■□□□ 1.47
CAPN1-206ENST00000526966 METTL22Q9BUU2 404 aaPredicted RBP24.22■■□□□ 1.47
CAPN1-206ENST00000526966 ANKIB1Q9P2G1 1089 aa24.22■■□□□ 1.47
CAPN1-206ENST00000526966 ZNF646O15015 1829 aaPredicted RBP24.21■■□□□ 1.47
CAPN1-206ENST00000526966 RBM26Q5T8P6 1007 aaKnown RBP24.21■■□□□ 1.47
CAPN1-206ENST00000526966 RGMBQ6NW40 437 aa24.21■■□□□ 1.47
CAPN1-206ENST00000526966 AKAP11Q9UKA4 1901 aa24.21■■□□□ 1.47
CAPN1-206ENST00000526966 GGA3Q9NZ52 723 aa24.2■■□□□ 1.46
CAPN1-206ENST00000526966 XDHP47989 1333 aa24.19■■□□□ 1.46
CAPN1-206ENST00000526966 DDX58O95786 925 aaKnown RBP24.19■■□□□ 1.46
CAPN1-206ENST00000526966 ZNF280AP59817 542 aaPredicted RBP24.19■■□□□ 1.46
CAPN1-206ENST00000526966 CCDC30Q5VVM6 783 aa24.19■■□□□ 1.46
CAPN1-206ENST00000526966 C2orf69Q8N8R5 385 aa24.19■■□□□ 1.46
CAPN1-206ENST00000526966 AGBL3Q8NEM8 1001 aa24.19■■□□□ 1.46
CAPN1-206ENST00000526966 CHMP4AQ9BY43 222 aa24.19■■□□□ 1.46
CAPN1-206ENST00000526966 ASTN2O75129 1339 aaPredicted RBP24.18■■□□□ 1.46
CAPN1-206ENST00000526966 CCDC85CA6NKD9 419 aa24.18■■□□□ 1.46
CAPN1-206ENST00000526966 RGS19P49795 217 aa24.18■■□□□ 1.46
CAPN1-206ENST00000526966 FAM161AQ3B820 660 aa24.18■■□□□ 1.46
CAPN1-206ENST00000526966 RSBN1LQ6PCB5 846 aaPredicted RBP24.18■■□□□ 1.46
CAPN1-206ENST00000526966 JARID2Q92833 1246 aaPredicted RBP24.18■■□□□ 1.46
CAPN1-206ENST00000526966 MCOLN1Q9GZU1 580 aa24.18■■□□□ 1.46
CAPN1-206ENST00000526966 G3V3G9 751 aa24.17■■□□□ 1.46
CAPN1-206ENST00000526966 DCAF8Q5TAQ9 597 aa24.17■■□□□ 1.46
CAPN1-206ENST00000526966 ANKRD18AQ8IVF6 992 aa24.17■■□□□ 1.46
CAPN1-206ENST00000526966 SULF1Q8IWU6 871 aa24.17■■□□□ 1.46
CAPN1-206ENST00000526966 CCDC102AQ96A19 550 aa24.17■■□□□ 1.46
CAPN1-206ENST00000526966 CCDC85AQ96PX6 553 aaPredicted RBP24.17■■□□□ 1.46
CAPN1-206ENST00000526966 GMLQ99445 158 aa24.17■■□□□ 1.46
CAPN1-206ENST00000526966 TSPYL6Q8N831 410 aa24.16■■□□□ 1.46
CAPN1-206ENST00000526966 MAP3K2Q9Y2U5 619 aa24.16■■□□□ 1.46
CAPN1-206ENST00000526966 IGKV5-2P06315 115 aa24.15■■□□□ 1.46
CAPN1-206ENST00000526966 ATP2B4P23634 1241 aa24.15■■□□□ 1.46
CAPN1-206ENST00000526966 CTSWP56202 376 aa24.15■■□□□ 1.46
CAPN1-206ENST00000526966 CDCA5Q96FF9 252 aa24.15■■□□□ 1.46
CAPN1-206ENST00000526966 SAGE1Q9NXZ1 904 aa24.15■■□□□ 1.46
CAPN1-206ENST00000526966 PAPPA2Q9BXP8 1791 aa24.15■■□□□ 1.46
CAPN1-206ENST00000526966 SLC10A3P09131 477 aa24.14■■□□□ 1.45
CAPN1-206ENST00000526966 ZNF157P51786 506 aaPredicted RBP24.14■■□□□ 1.45
CAPN1-206ENST00000526966 KSR2Q6VAB6 950 aa24.14■■□□□ 1.45
CAPN1-206ENST00000526966 PODNQ7Z5L7 613 aa24.14■■□□□ 1.45
CAPN1-206ENST00000526966 CDC5LQ99459 802 aaKnown RBP24.14■■□□□ 1.45
CAPN1-206ENST00000526966 MED23Q9ULK4 1368 aa24.14■■□□□ 1.45
CAPN1-206ENST00000526966 PI4KAP2A4QPH2 592 aa24.13■■□□□ 1.45
CAPN1-206ENST00000526966 KIF23Q02241 960 aaPredicted RBP24.13■■□□□ 1.45
CAPN1-206ENST00000526966 ANGEL2Q5VTE6 544 aaKnown RBP24.13■■□□□ 1.45
CAPN1-206ENST00000526966 PI4KAP1Q8N8J0 262 aa24.13■■□□□ 1.45
CAPN1-206ENST00000526966 CACNA1FO60840 1977 aa24.12■■□□□ 1.45
CAPN1-206ENST00000526966 PITPNM2Q9BZ72 1349 aa24.12■■□□□ 1.45
CAPN1-206ENST00000526966 DGKZQ13574 1117 aa24.12■■□□□ 1.45
CAPN1-206ENST00000526966 SCARF1Q14162 830 aa24.12■■□□□ 1.45
CAPN1-206ENST00000526966 TTLL11Q8NHH1 800 aa24.12■■□□□ 1.45
CAPN1-206ENST00000526966 USP17L3A6NCW0 530 aa24.11■■□□□ 1.45
CAPN1-206ENST00000526966 USP17L4A6NCW7 530 aa24.11■■□□□ 1.45
CAPN1-206ENST00000526966 USP17L8P0C7I0 530 aa24.11■■□□□ 1.45
CAPN1-206ENST00000526966 MLLT1Q03111 559 aaPredicted RBP24.11■■□□□ 1.45
CAPN1-206ENST00000526966 USP17L1Q7RTZ2 530 aa24.11■■□□□ 1.45
CAPN1-206ENST00000526966 MYOZ2Q9NPC6 264 aa24.11■■□□□ 1.45
CAPN1-206ENST00000526966 BSDC1Q9NW68 430 aaPredicted RBP24.11■■□□□ 1.45
CAPN1-206ENST00000526966 TSR2Q969E8 191 aaKnown RBP24.1■■□□□ 1.45
CAPN1-206ENST00000526966 GREM2Q9H772 168 aa24.1■■□□□ 1.45
CAPN1-206ENST00000526966 MINPP1Q9UNW1 487 aa24.1■■□□□ 1.45
CAPN1-206ENST00000526966 WTIPA6NIX2 430 aaPredicted RBP24.09■■□□□ 1.45
CAPN1-206ENST00000526966 FKBP1BP68106 108 aa24.09■■□□□ 1.45
CAPN1-206ENST00000526966 NEXNQ0ZGT2 675 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms