RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 ADGRB1O14514 1584 aa8.54□□□□□ -1.04
ATPAF1-208ENST00000526821 NLRP1Q9C000 1473 aa8.54□□□□□ -1.04
ATPAF1-208ENST00000526821 A0A1W2PNR3 127 aa8.54□□□□□ -1.04
ATPAF1-208ENST00000526821 BMP4P12644 408 aa8.54□□□□□ -1.04
ATPAF1-208ENST00000526821 NOS2P35228 1153 aa8.54□□□□□ -1.04
ATPAF1-208ENST00000526821 DDX10Q13206 875 aaKnown RBP8.54□□□□□ -1.04
ATPAF1-208ENST00000526821 CFAP70Q5T0N1 1121 aa8.54□□□□□ -1.04
ATPAF1-208ENST00000526821 TESK2Q96S53 571 aa8.54□□□□□ -1.04
ATPAF1-208ENST00000526821 GPC6Q9Y625 555 aaPredicted RBP8.54□□□□□ -1.04
ATPAF1-208ENST00000526821 KIF7Q2M1P5 1343 aa8.54□□□□□ -1.04
ATPAF1-208ENST00000526821 ADAMTSL3P82987 1691 aa8.53□□□□□ -1.04
ATPAF1-208ENST00000526821 ATXN7O15265 892 aaPredicted RBP8.53□□□□□ -1.04
ATPAF1-208ENST00000526821 CELA2BP08218 269 aaPredicted RBP8.53□□□□□ -1.04
ATPAF1-208ENST00000526821 BCRP11274 1271 aa8.53□□□□□ -1.04
ATPAF1-208ENST00000526821 FGFR3P22607 806 aa8.53□□□□□ -1.04
ATPAF1-208ENST00000526821 EPHA4P54764 986 aa8.53□□□□□ -1.04
ATPAF1-208ENST00000526821 FOXK2Q01167 660 aa8.53□□□□□ -1.04
ATPAF1-208ENST00000526821 LYPD4Q6UWN0 246 aa8.53□□□□□ -1.04
ATPAF1-208ENST00000526821 NEDD1Q8NHV4 660 aa8.53□□□□□ -1.04
ATPAF1-208ENST00000526821 WHAMMQ8TF30 809 aa8.53□□□□□ -1.04
ATPAF1-208ENST00000526821 SCARF2Q96GP6 870 aaPredicted RBP8.53□□□□□ -1.04
ATPAF1-208ENST00000526821 ABHD17AQ96GS6 310 aa8.53□□□□□ -1.04
ATPAF1-208ENST00000526821 ZCCHC2Q9C0B9 1178 aaKnown RBP8.53□□□□□ -1.04
ATPAF1-208ENST00000526821 LRRC4BQ9NT99 713 aa8.53□□□□□ -1.04
ATPAF1-208ENST00000526821 GDF2Q9UK05 429 aaPredicted RBP8.53□□□□□ -1.04
ATPAF1-208ENST00000526821 PARP3Q9Y6F1 533 aa8.53□□□□□ -1.04
ATPAF1-208ENST00000526821 ZNF295-AS1Q8N0V1 137 aa8.52□□□□□ -1.05
ATPAF1-208ENST00000526821 GAS2L2Q8NHY3 880 aa8.52□□□□□ -1.05
ATPAF1-208ENST00000526821 OXCT2Q9BYC2 517 aaPredicted RBP8.52□□□□□ -1.05
ATPAF1-208ENST00000526821 USP3Q9Y6I4 520 aa8.52□□□□□ -1.05
ATPAF1-208ENST00000526821 FAM196BA6NMK8 535 aa8.51□□□□□ -1.05
ATPAF1-208ENST00000526821 SFI1A8K8P3 1242 aa8.51□□□□□ -1.05
ATPAF1-208ENST00000526821 THBS1P07996 1170 aa8.51□□□□□ -1.05
ATPAF1-208ENST00000526821 CEBPAP49715 358 aaPredicted RBP8.51□□□□□ -1.05
ATPAF1-208ENST00000526821 TBCELQ5QJ74 424 aa8.51□□□□□ -1.05
ATPAF1-208ENST00000526821 PODNQ7Z5L7 613 aa8.51□□□□□ -1.05
ATPAF1-208ENST00000526821 ZIC5Q96T25 663 aa8.51□□□□□ -1.05
ATPAF1-208ENST00000526821 HINFPQ9BQA5 517 aa8.51□□□□□ -1.05
ATPAF1-208ENST00000526821 TSPAN10Q9H1Z9 355 aaPredicted RBP8.51□□□□□ -1.05
ATPAF1-208ENST00000526821 RIMS2Q9UQ26 1411 aa8.51□□□□□ -1.05
ATPAF1-208ENST00000526821 UBR1Q8IWV7 1749 aa8.51□□□□□ -1.05
ATPAF1-208ENST00000526821 ASXL1Q8IXJ9 1541 aa8.5□□□□□ -1.05
ATPAF1-208ENST00000526821 KHNYNO15037 678 aaKnown RBP8.5□□□□□ -1.05
ATPAF1-208ENST00000526821 PPP1R12BO60237 982 aaPredicted RBP8.5□□□□□ -1.05
ATPAF1-208ENST00000526821 BNIP3LO60238 219 aa8.5□□□□□ -1.05
ATPAF1-208ENST00000526821 ARHGEF15O94989 841 aa8.5□□□□□ -1.05
ATPAF1-208ENST00000526821 UBAP2LQ14157 1087 aaKnown RBP8.5□□□□□ -1.05
ATPAF1-208ENST00000526821 GOLGA6L1Q8N7Z2 621 aa8.5□□□□□ -1.05
ATPAF1-208ENST00000526821 TSEN2Q8NCE0 465 aaKnown RBP8.5□□□□□ -1.05
ATPAF1-208ENST00000526821 RHPN1Q8TCX5 695 aa8.5□□□□□ -1.05
ATPAF1-208ENST00000526821 ANKIB1Q9P2G1 1089 aa8.5□□□□□ -1.05
ATPAF1-208ENST00000526821 MYO3AQ8NEV4 1616 aa8.5□□□□□ -1.05
ATPAF1-208ENST00000526821 EIF3AQ14152 1382 aaKnown RBP8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 TMEM2Q9UHN6 1383 aa8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 SBNO2Q9Y2G9 1366 aa8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 DCDC2BA2VCK2 349 aa8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 USP17L15C9J2P7 530 aa8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 USP17L10C9JJH3 530 aa8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 USP17L13C9JLJ4 530 aa8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 USP17L12C9JPN9 530 aa8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 USP17L11C9JVI0 530 aa8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 USP17L21D6R901 530 aa8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 USP17L18D6R9N7 530 aa8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 USP17L22D6RA61 530 aa8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 USP17L17D6RBQ6 530 aa8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 USP17L19D6RCP7 530 aa8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 USP17L20D6RJB6 530 aa8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 TXLNAP40222 546 aa8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 USP17L24Q0WX57 530 aa8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 HIF1AQ16665 826 aa8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 SAMD5Q5TGI4 173 aa8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 C1orf53Q5VUE5 145 aa8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 ZDHHC1Q8WTX9 485 aa8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 ACDQ96AP0 544 aa8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 KLRG1Q96E93 195 aa8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 ZMYND15Q9H091 742 aa8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 NDFIP2Q9NV92 336 aa8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 GTF3C3Q9Y5Q9 886 aa8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 ARHGAP23Q9P227 1491 aa8.49□□□□□ -1.05
ATPAF1-208ENST00000526821 DISP3Q9P2K9 1392 aa8.48□□□□□ -1.05
ATPAF1-208ENST00000526821 ALKQ9UM73 1620 aa8.48□□□□□ -1.05
ATPAF1-208ENST00000526821 PHF20L1A8MW92 1017 aa8.48□□□□□ -1.05
ATPAF1-208ENST00000526821 EML1O00423 815 aa8.48□□□□□ -1.05
ATPAF1-208ENST00000526821 FAM157BP0CG42 384 aa8.48□□□□□ -1.05
ATPAF1-208ENST00000526821 RFX1P22670 979 aa8.48□□□□□ -1.05
ATPAF1-208ENST00000526821 HIRAP54198 1017 aaPredicted RBP8.48□□□□□ -1.05
ATPAF1-208ENST00000526821 KCNMA1Q12791 1236 aa8.48□□□□□ -1.05
ATPAF1-208ENST00000526821 DPYDQ12882 1025 aa8.48□□□□□ -1.05
ATPAF1-208ENST00000526821 PTK7Q13308 1070 aa8.48□□□□□ -1.05
ATPAF1-208ENST00000526821 LAMC2Q13753 1193 aa8.48□□□□□ -1.05
ATPAF1-208ENST00000526821 ANKMY2Q8IV38 441 aa8.48□□□□□ -1.05
ATPAF1-208ENST00000526821 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.48□□□□□ -1.05
ATPAF1-208ENST00000526821 PTPRMP28827 1452 aa8.48□□□□□ -1.05
ATPAF1-208ENST00000526821 RIMS1Q86UR5 1692 aaKnown RBP8.48□□□□□ -1.05
ATPAF1-208ENST00000526821 SETD1AO15047 1707 aaKnown RBP8.48□□□□□ -1.05
ATPAF1-208ENST00000526821 SLIT1O75093 1534 aa8.48□□□□□ -1.05
ATPAF1-208ENST00000526821 NRXN3Q9Y4C0 1643 aa8.47□□□□□ -1.05
ATPAF1-208ENST00000526821 OIP5O43482 229 aa8.47□□□□□ -1.05
ATPAF1-208ENST00000526821 MAPTP10636 758 aaKnown RBP8.47□□□□□ -1.05
ATPAF1-208ENST00000526821 CRTC2Q53ET0 693 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms