RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 ZKSCAN2Q63HK3 967 aa20.41■□□□□ 0.86
SSSCA1-202ENST00000526433 BICC1Q9H694 974 aaKnown RBP20.41■□□□□ 0.86
SSSCA1-202ENST00000526433 GGA1Q9UJY5 639 aa20.41■□□□□ 0.86
SSSCA1-202ENST00000526433 COL4A5P29400 1685 aa20.41■□□□□ 0.86
SSSCA1-202ENST00000526433 SPEF2Q9C093 1822 aa20.41■□□□□ 0.86
SSSCA1-202ENST00000526433 RIMBP2O15034 1052 aa20.4■□□□□ 0.86
SSSCA1-202ENST00000526433 XDHP47989 1333 aa20.4■□□□□ 0.86
SSSCA1-202ENST00000526433 EIF6P56537 245 aaKnown RBP20.4■□□□□ 0.86
SSSCA1-202ENST00000526433 CLUAP1Q96AJ1 413 aa20.4■□□□□ 0.86
SSSCA1-202ENST00000526433 EYA3Q99504 573 aa20.4■□□□□ 0.86
SSSCA1-202ENST00000526433 ZNF541Q9H0D2 1346 aa20.4■□□□□ 0.86
SSSCA1-202ENST00000526433 DUOX1Q9NRD9 1551 aa20.39■□□□□ 0.85
SSSCA1-202ENST00000526433 UFL1O94874 794 aa20.39■□□□□ 0.85
SSSCA1-202ENST00000526433 VEGFAP15692 232 aaPredicted RBP20.39■□□□□ 0.85
SSSCA1-202ENST00000526433 RABL6Q3YEC7 729 aaPredicted RBP20.39■□□□□ 0.85
SSSCA1-202ENST00000526433 ANKRD44Q8N8A2 993 aa20.39■□□□□ 0.85
SSSCA1-202ENST00000526433 ZNF594Q96JF6 807 aaPredicted RBP20.39■□□□□ 0.85
SSSCA1-202ENST00000526433 GPR101Q96P66 508 aaPredicted RBP20.39■□□□□ 0.85
SSSCA1-202ENST00000526433 ZNRF3Q9ULT6 936 aa20.39■□□□□ 0.85
SSSCA1-202ENST00000526433 POTECB2RU33 542 aa20.38■□□□□ 0.85
SSSCA1-202ENST00000526433 ATP2B4P23634 1241 aa20.38■□□□□ 0.85
SSSCA1-202ENST00000526433 TAF7LQ5H9L4 462 aa20.38■□□□□ 0.85
SSSCA1-202ENST00000526433 ZC3H12CQ9C0D7 883 aaKnown RBP20.38■□□□□ 0.85
SSSCA1-202ENST00000526433 LTBP1Q14766 1721 aa20.37■□□□□ 0.85
SSSCA1-202ENST00000526433 WTIPA6NIX2 430 aaPredicted RBP20.37■□□□□ 0.85
SSSCA1-202ENST00000526433 UBTFL1P0CB47 393 aaPredicted RBP20.37■□□□□ 0.85
SSSCA1-202ENST00000526433 ANKRD2Q9GZV1 360 aa20.37■□□□□ 0.85
SSSCA1-202ENST00000526433 GJA3Q9Y6H8 435 aa20.37■□□□□ 0.85
SSSCA1-202ENST00000526433 LDHAL6AQ6ZMR3 332 aa20.36■□□□□ 0.85
SSSCA1-202ENST00000526433 GPC2Q8N158 579 aa20.36■□□□□ 0.85
SSSCA1-202ENST00000526433 C1QTNF8P60827 252 aa20.35■□□□□ 0.85
SSSCA1-202ENST00000526433 CHRNDQ07001 517 aa20.35■□□□□ 0.85
SSSCA1-202ENST00000526433 CXCL9Q07325 125 aa20.35■□□□□ 0.85
SSSCA1-202ENST00000526433 DOK7Q18PE1 504 aa20.35■□□□□ 0.85
SSSCA1-202ENST00000526433 C16orf71Q8IYS4 520 aaPredicted RBP20.35■□□□□ 0.85
SSSCA1-202ENST00000526433 MEIS3Q99687 375 aa20.35■□□□□ 0.85
SSSCA1-202ENST00000526433 CNNM1Q9NRU3 951 aa20.35■□□□□ 0.85
SSSCA1-202ENST00000526433 HDAC5Q9UQL6 1122 aa20.35■□□□□ 0.85
SSSCA1-202ENST00000526433 LEMD3Q9Y2U8 911 aa20.35■□□□□ 0.85
SSSCA1-202ENST00000526433 WDR90Q96KV7 1748 aa20.35■□□□□ 0.85
SSSCA1-202ENST00000526433 YDJCA8MPS7 323 aa20.34■□□□□ 0.85
SSSCA1-202ENST00000526433 TMEM57Q8N5G2 664 aa20.34■□□□□ 0.85
SSSCA1-202ENST00000526433 HELBQ8NG08 1087 aaPredicted RBP20.34■□□□□ 0.85
SSSCA1-202ENST00000526433 L3MBTL3Q96JM7 780 aaPredicted RBP20.34■□□□□ 0.85
SSSCA1-202ENST00000526433 YTHDC1Q96MU7 727 aaKnown RBP20.34■□□□□ 0.85
SSSCA1-202ENST00000526433 DBNDD1Q9H9R9 158 aa20.34■□□□□ 0.85
SSSCA1-202ENST00000526433 G3V3G9 751 aa20.33■□□□□ 0.85
SSSCA1-202ENST00000526433 RAD17O75943 681 aa20.33■□□□□ 0.85
SSSCA1-202ENST00000526433 TOMM70O94826 608 aa20.33■□□□□ 0.85
SSSCA1-202ENST00000526433 GNAI3P08754 354 aa20.33■□□□□ 0.85
SSSCA1-202ENST00000526433 DCAF8Q5TAQ9 597 aa20.33■□□□□ 0.85
SSSCA1-202ENST00000526433 DZIP1LQ8IYY4 767 aaKnown RBP20.33■□□□□ 0.85
SSSCA1-202ENST00000526433 RCAN3Q9UKA8 241 aa20.33■□□□□ 0.85
SSSCA1-202ENST00000526433 LRRFIP2Q9Y608 721 aaKnown RBP20.33■□□□□ 0.85
SSSCA1-202ENST00000526433 TAF5LO75529 589 aa20.32■□□□□ 0.84
SSSCA1-202ENST00000526433 CIAPIN1Q6FI81 312 aa20.32■□□□□ 0.84
SSSCA1-202ENST00000526433 PUS3Q9BZE2 481 aaKnown RBP20.32■□□□□ 0.84
SSSCA1-202ENST00000526433 ZNF804BA4D1E1 1349 aa20.31■□□□□ 0.84
SSSCA1-202ENST00000526433 IQCA1LA6NCM1 817 aa20.31■□□□□ 0.84
SSSCA1-202ENST00000526433 PLIN1O60240 522 aa20.31■□□□□ 0.84
SSSCA1-202ENST00000526433 ECE2O60344 883 aa20.31■□□□□ 0.84
SSSCA1-202ENST00000526433 TNIP1Q15025 636 aa20.31■□□□□ 0.84
SSSCA1-202ENST00000526433 FTSJ3Q8IY81 847 aaKnown RBP20.31■□□□□ 0.84
SSSCA1-202ENST00000526433 KCNQ5Q9NR82 932 aa20.31■□□□□ 0.84
SSSCA1-202ENST00000526433 RIPOR2Q9Y4F9 1068 aa20.31■□□□□ 0.84
SSSCA1-202ENST00000526433 RLBP1P12271 317 aa20.3■□□□□ 0.84
SSSCA1-202ENST00000526433 KCNJ4P48050 445 aa20.3■□□□□ 0.84
SSSCA1-202ENST00000526433 KLHDC4Q8TBB5 520 aa20.3■□□□□ 0.84
SSSCA1-202ENST00000526433 HACL1Q9UJ83 578 aa20.3■□□□□ 0.84
SSSCA1-202ENST00000526433 SCN4AP35499 1836 aa20.3■□□□□ 0.84
SSSCA1-202ENST00000526433 SNAP23O00161 211 aa20.29■□□□□ 0.84
SSSCA1-202ENST00000526433 RFX5P48382 616 aaPredicted RBP20.29■□□□□ 0.84
SSSCA1-202ENST00000526433 LRRC24Q50LG9 513 aa20.29■□□□□ 0.84
SSSCA1-202ENST00000526433 TXNRD3Q86VQ6 643 aa20.29■□□□□ 0.84
SSSCA1-202ENST00000526433 RBM46Q8TBY0 533 aaKnown RBP20.29■□□□□ 0.84
SSSCA1-202ENST00000526433 TAF1DQ9H5J8 278 aaPredicted RBP20.29■□□□□ 0.84
SSSCA1-202ENST00000526433 MED23Q9ULK4 1368 aa20.28■□□□□ 0.84
SSSCA1-202ENST00000526433 PSMD14O00487 310 aa20.27■□□□□ 0.84
SSSCA1-202ENST00000526433 GNAI2P04899 355 aa20.27■□□□□ 0.84
SSSCA1-202ENST00000526433 LMOD1P29536 600 aaPredicted RBP20.27■□□□□ 0.84
SSSCA1-202ENST00000526433 GMPSP49915 693 aaPredicted RBP20.27■□□□□ 0.84
SSSCA1-202ENST00000526433 SCNN1DP51172 638 aa20.27■□□□□ 0.84
SSSCA1-202ENST00000526433 PTPN12Q05209 780 aaKnown RBP20.27■□□□□ 0.84
SSSCA1-202ENST00000526433 PODNQ7Z5L7 613 aa20.27■□□□□ 0.84
SSSCA1-202ENST00000526433 PANK1Q8TE04 598 aa20.27■□□□□ 0.84
SSSCA1-202ENST00000526433 MROH5Q6ZUA9 1318 aa20.27■□□□□ 0.83
SSSCA1-202ENST00000526433 MS4A1P11836 297 aa20.26■□□□□ 0.83
SSSCA1-202ENST00000526433 KLRK1P26718 216 aa20.26■□□□□ 0.83
SSSCA1-202ENST00000526433 EPHX2P34913 555 aa20.26■□□□□ 0.83
SSSCA1-202ENST00000526433 EPS15P42566 896 aa20.26■□□□□ 0.83
SSSCA1-202ENST00000526433 ITPRIPQ8IWB1 547 aa20.26■□□□□ 0.83
SSSCA1-202ENST00000526433 SCN9AQ15858 1988 aa20.25■□□□□ 0.83
SSSCA1-202ENST00000526433 EYA2O00167 538 aa20.25■□□□□ 0.83
SSSCA1-202ENST00000526433 ZBTB7BO15156 539 aaPredicted RBP20.25■□□□□ 0.83
SSSCA1-202ENST00000526433 C15orf52Q6ZUT6 534 aaKnown RBP20.25■□□□□ 0.83
SSSCA1-202ENST00000526433 COA1Q9GZY4 146 aa20.25■□□□□ 0.83
SSSCA1-202ENST00000526433 GPRC5DQ9NZD1 345 aa20.25■□□□□ 0.83
SSSCA1-202ENST00000526433 ZBTB12Q9Y330 459 aaPredicted RBP20.25■□□□□ 0.83
SSSCA1-202ENST00000526433 A0A1B0GUL6 1792 aa20.24■□□□□ 0.83
SSSCA1-202ENST00000526433 VIL1P09327 827 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms