RNA–Protein interactions for RNA: ENST00000526369.3

PPFIA1-208, Transcript of PTPRF interacting protein alpha 1, human

TSL 4

Gene PPFIA1, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-208	ENST00000526369	SLC51A	Q86UW1	340 aa		12.86	□□□□□ -0.35
PPFIA1-208	ENST00000526369	SIRT2	Q8IXJ6	389 aa		12.86	□□□□□ -0.35
PPFIA1-208	ENST00000526369	GPC2	Q8N158	579 aa		12.86	□□□□□ -0.35
PPFIA1-208	ENST00000526369	RPGR	Q92834	1020 aa	Known RBP	12.86	□□□□□ -0.35
PPFIA1-208	ENST00000526369	LNPK	Q9C0E8	428 aa		12.86	□□□□□ -0.35
PPFIA1-208	ENST00000526369	CWC25	Q9NXE8	425 aa	Predicted RBP	12.86	□□□□□ -0.35
PPFIA1-208	ENST00000526369	BCOR	Q6W2J9	1755 aa		12.86	□□□□□ -0.35
PPFIA1-208	ENST00000526369	MAP3K15	Q6ZN16	1313 aa		12.86	□□□□□ -0.35
PPFIA1-208	ENST00000526369	WDR33	Q9C0J8	1336 aa	Known RBP	12.86	□□□□□ -0.35
PPFIA1-208	ENST00000526369	SRGAP3	O43295	1099 aa		12.85	□□□□□ -0.35
PPFIA1-208	ENST00000526369	IGKV5-2	P06315	115 aa		12.85	□□□□□ -0.35
PPFIA1-208	ENST00000526369	NBPF7	P0C2Y1	421 aa	Predicted RBP	12.85	□□□□□ -0.35
PPFIA1-208	ENST00000526369	LMOD1	P29536	600 aa	Predicted RBP	12.85	□□□□□ -0.35
PPFIA1-208	ENST00000526369	ATP8B2	P98198	1209 aa		12.85	□□□□□ -0.35
PPFIA1-208	ENST00000526369	FAM161A	Q3B820	660 aa		12.85	□□□□□ -0.35
PPFIA1-208	ENST00000526369	TTLL7	Q6ZT98	887 aa		12.85	□□□□□ -0.35
PPFIA1-208	ENST00000526369	LARGE2	Q8N3Y3	721 aa		12.85	□□□□□ -0.35
PPFIA1-208	ENST00000526369	NYX	Q9GZU5	481 aa		12.85	□□□□□ -0.35
PPFIA1-208	ENST00000526369	ABCC12	Q96J65	1359 aa		12.84	□□□□□ -0.35
PPFIA1-208	ENST00000526369	RASSF10	A6NK89	507 aa		12.84	□□□□□ -0.35
PPFIA1-208	ENST00000526369	EPS15	P42566	896 aa		12.84	□□□□□ -0.35
PPFIA1-208	ENST00000526369	OS9	Q13438	667 aa	Predicted RBP	12.84	□□□□□ -0.35
PPFIA1-208	ENST00000526369	MTX1	Q13505	466 aa		12.84	□□□□□ -0.35
PPFIA1-208	ENST00000526369	SKAP1	Q86WV1	359 aa		12.84	□□□□□ -0.35
PPFIA1-208	ENST00000526369	CCDC191	Q8NCU4	936 aa		12.84	□□□□□ -0.35
PPFIA1-208	ENST00000526369	PSMD1	Q99460	953 aa		12.84	□□□□□ -0.35
PPFIA1-208	ENST00000526369	RAB11FIP3	O75154	756 aa		12.83	□□□□□ -0.36
PPFIA1-208	ENST00000526369	HSPA8	P11142	646 aa	Known RBP	12.83	□□□□□ -0.36
PPFIA1-208	ENST00000526369	MAP2K1	Q02750	393 aa	Predicted RBP	12.83	□□□□□ -0.36
PPFIA1-208	ENST00000526369	UBE3B	Q7Z3V4	1068 aa		12.83	□□□□□ -0.36
PPFIA1-208	ENST00000526369	PPP1R42	Q7Z4L9	355 aa		12.83	□□□□□ -0.36
PPFIA1-208	ENST00000526369	ERC1	Q8IUD2	1116 aa		12.83	□□□□□ -0.36
PPFIA1-208	ENST00000526369	SSH3	Q8TE77	659 aa		12.83	□□□□□ -0.36
PPFIA1-208	ENST00000526369	RBM17	Q96I25	401 aa	Known RBP	12.83	□□□□□ -0.36
PPFIA1-208	ENST00000526369	LRRCC1	Q9C099	1032 aa		12.83	□□□□□ -0.36
PPFIA1-208	ENST00000526369	DICER1	Q9UPY3	1922 aa	Known RBP	12.83	□□□□□ -0.36
PPFIA1-208	ENST00000526369	CACNA1S	Q13698	1873 aa		12.82	□□□□□ -0.36
PPFIA1-208	ENST00000526369	PNMA6E	A0A0J9YXQ4	647 aa		12.82	□□□□□ -0.36
PPFIA1-208	ENST00000526369	ERVV-1	B6SEH8	477 aa		12.82	□□□□□ -0.36
PPFIA1-208	ENST00000526369	ATP5J2-PTCD1	G3V325	749 aa		12.82	□□□□□ -0.36
PPFIA1-208	ENST00000526369	TRAF5	O00463	557 aa		12.82	□□□□□ -0.36
PPFIA1-208	ENST00000526369	PPEF1	O14829	653 aa	Predicted RBP	12.82	□□□□□ -0.36
PPFIA1-208	ENST00000526369	RGL2	O15211	777 aa		12.82	□□□□□ -0.36
PPFIA1-208	ENST00000526369	POLA2	Q14181	598 aa		12.82	□□□□□ -0.36
PPFIA1-208	ENST00000526369	CRY2	Q49AN0	593 aa		12.82	□□□□□ -0.36
PPFIA1-208	ENST00000526369	SUSD4	Q5VX71	490 aa		12.82	□□□□□ -0.36
PPFIA1-208	ENST00000526369	ABHD8	Q96I13	439 aa		12.82	□□□□□ -0.36
PPFIA1-208	ENST00000526369	SUCLG2	Q96I99	432 aa		12.82	□□□□□ -0.36
PPFIA1-208	ENST00000526369	EXOC6B	Q9Y2D4	811 aa		12.82	□□□□□ -0.36
PPFIA1-208	ENST00000526369	APBB1	O00213	710 aa		12.81	□□□□□ -0.36
PPFIA1-208	ENST00000526369	PDE4A	P27815	886 aa		12.81	□□□□□ -0.36
PPFIA1-208	ENST00000526369	SCNN1D	P51172	638 aa		12.81	□□□□□ -0.36
PPFIA1-208	ENST00000526369	TCIRG1	Q13488	830 aa		12.81	□□□□□ -0.36
PPFIA1-208	ENST00000526369	CC2D2B	Q6DHV5	1058 aa		12.81	□□□□□ -0.36
PPFIA1-208	ENST00000526369	CYP4F22	Q6NT55	531 aa		12.81	□□□□□ -0.36
PPFIA1-208	ENST00000526369	GIGYF2	Q6Y7W6	1299 aa	Known RBP	12.81	□□□□□ -0.36
PPFIA1-208	ENST00000526369	C3orf67	Q6ZVT6	689 aa		12.81	□□□□□ -0.36
PPFIA1-208	ENST00000526369	NIM1K	Q8IY84	436 aa		12.81	□□□□□ -0.36
PPFIA1-208	ENST00000526369	CAPNS2	Q96L46	248 aa		12.81	□□□□□ -0.36
PPFIA1-208	ENST00000526369	BEGAIN	Q9BUH8	593 aa		12.81	□□□□□ -0.36
PPFIA1-208	ENST00000526369	BICC1	Q9H694	974 aa	Known RBP	12.81	□□□□□ -0.36
PPFIA1-208	ENST00000526369	UBN2	Q6ZU65	1347 aa		12.81	□□□□□ -0.36
PPFIA1-208	ENST00000526369	NUP98	P52948	1817 aa		12.81	□□□□□ -0.36
PPFIA1-208	ENST00000526369	PPIP5K2	O43314	1243 aa		12.8	□□□□□ -0.36
PPFIA1-208	ENST00000526369	EIF5B	O60841	1220 aa	Known RBP	12.8	□□□□□ -0.36
PPFIA1-208	ENST00000526369	SURF6	O75683	361 aa	Known RBP	12.8	□□□□□ -0.36
PPFIA1-208	ENST00000526369	HOXA10	P31260	410 aa	Predicted RBP	12.8	□□□□□ -0.36
PPFIA1-208	ENST00000526369	AOC3	Q16853	763 aa		12.8	□□□□□ -0.36
PPFIA1-208	ENST00000526369	KIF1BP	Q96EK5	621 aa		12.8	□□□□□ -0.36
PPFIA1-208	ENST00000526369	GPR101	Q96P66	508 aa	Predicted RBP	12.8	□□□□□ -0.36
PPFIA1-208	ENST00000526369	TMX4	Q9H1E5	349 aa	Predicted RBP	12.8	□□□□□ -0.36
PPFIA1-208	ENST00000526369	TSKS	Q9UJT2	592 aa		12.8	□□□□□ -0.36
PPFIA1-208	ENST00000526369	SCN4A	P35499	1836 aa		12.8	□□□□□ -0.36
PPFIA1-208	ENST00000526369	LAMB2	P55268	1798 aa		12.79	□□□□□ -0.36
PPFIA1-208	ENST00000526369	CCDC85C	A6NKD9	419 aa		12.79	□□□□□ -0.36
PPFIA1-208	ENST00000526369	HSP90B1	P14625	803 aa	Known RBP	12.79	□□□□□ -0.36
PPFIA1-208	ENST00000526369	ECE1	P42892	770 aa		12.79	□□□□□ -0.36
PPFIA1-208	ENST00000526369	CST9	Q5W186	159 aa		12.79	□□□□□ -0.36
PPFIA1-208	ENST00000526369	USP50	Q70EL3	339 aa	Predicted RBP	12.79	□□□□□ -0.36
PPFIA1-208	ENST00000526369	GPATCH3	Q96I76	525 aa		12.79	□□□□□ -0.36
PPFIA1-208	ENST00000526369	ISCA1	Q9BUE6	129 aa		12.79	□□□□□ -0.36
PPFIA1-208	ENST00000526369	BACH2	Q9BYV9	841 aa		12.79	□□□□□ -0.36
PPFIA1-208	ENST00000526369	UPF2	Q9HAU5	1272 aa	Known RBP	12.79	□□□□□ -0.36
PPFIA1-208	ENST00000526369	CHMP3	Q9Y3E7	222 aa		12.79	□□□□□ -0.36
PPFIA1-208	ENST00000526369	COL4A5	P29400	1685 aa		12.78	□□□□□ -0.36
PPFIA1-208	ENST00000526369	AOC2	O75106	756 aa		12.78	□□□□□ -0.36
PPFIA1-208	ENST00000526369	ANP32A	P39687	249 aa	Known RBP	12.78	□□□□□ -0.36
PPFIA1-208	ENST00000526369	TRIM28	Q13263	835 aa	Known RBP	12.78	□□□□□ -0.36
PPFIA1-208	ENST00000526369	BMP2KL	Q5H9B9	411 aa		12.78	□□□□□ -0.36
PPFIA1-208	ENST00000526369	ZNF34	Q8IZ26	560 aa		12.78	□□□□□ -0.36
PPFIA1-208	ENST00000526369	NLRP3	Q96P20	1036 aa		12.78	□□□□□ -0.36
PPFIA1-208	ENST00000526369	CRAMP1	Q96RY5	1269 aa		12.78	□□□□□ -0.36
PPFIA1-208	ENST00000526369	BCL11A	Q9H165	835 aa		12.78	□□□□□ -0.36
PPFIA1-208	ENST00000526369	MYH3	P11055	1940 aa		12.78	□□□□□ -0.36
PPFIA1-208	ENST00000526369	NTSR2	O95665	410 aa		12.77	□□□□□ -0.37
PPFIA1-208	ENST00000526369	PCCA	P05165	728 aa	Predicted RBP	12.77	□□□□□ -0.37
PPFIA1-208	ENST00000526369	G3BP1	Q13283	466 aa	Known RBP eCLIP	12.77	□□□□□ -0.37
PPFIA1-208	ENST00000526369	C8orf34	Q49A92	452 aa		12.77	□□□□□ -0.37
PPFIA1-208	ENST00000526369	GRIPAP1	Q4V328	841 aa		12.77	□□□□□ -0.37
PPFIA1-208	ENST00000526369	PARP10	Q53GL7	1025 aa		12.77	□□□□□ -0.37

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