RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 STMN2Q93045 179 aa10.68□□□□□ -0.7
CTNND1-213ENST00000526357 GAPVD1Q14C86 1478 aa10.68□□□□□ -0.7
CTNND1-213ENST00000526357 AFMP43652 599 aa10.68□□□□□ -0.7
CTNND1-213ENST00000526357 CEP57Q86XR8 500 aa10.68□□□□□ -0.7
CTNND1-213ENST00000526357 ZGPATQ8N5A5 531 aaKnown RBP10.68□□□□□ -0.7
CTNND1-213ENST00000526357 ZNF219Q9P2Y4 722 aaPredicted RBP10.68□□□□□ -0.7
CTNND1-213ENST00000526357 DBF4Q9UBU7 674 aaPredicted RBP10.68□□□□□ -0.7
CTNND1-213ENST00000526357 ST5P78524 1137 aa10.68□□□□□ -0.7
CTNND1-213ENST00000526357 PPP1R7Q15435 360 aa10.68□□□□□ -0.7
CTNND1-213ENST00000526357 TAF12Q16514 161 aa10.68□□□□□ -0.7
CTNND1-213ENST00000526357 MIPOL1Q8TD10 442 aa10.68□□□□□ -0.7
CTNND1-213ENST00000526357 KCNK9Q9NPC2 374 aa10.68□□□□□ -0.7
CTNND1-213ENST00000526357 HDAC9Q9UKV0 1011 aa10.68□□□□□ -0.7
CTNND1-213ENST00000526357 NCOA2Q15596 1464 aa10.67□□□□□ -0.7
CTNND1-213ENST00000526357 TSGA10Q9BZW7 698 aa10.67□□□□□ -0.7
CTNND1-213ENST00000526357 C6orf50Q9HD87 102 aa10.67□□□□□ -0.7
CTNND1-213ENST00000526357 DNAI1Q9UI46 699 aa10.67□□□□□ -0.7
CTNND1-213ENST00000526357 POGZQ7Z3K3 1410 aa10.67□□□□□ -0.7
CTNND1-213ENST00000526357 NSD3Q9BZ95 1437 aa10.67□□□□□ -0.7
CTNND1-213ENST00000526357 CASQ2O14958 399 aaPredicted RBP10.67□□□□□ -0.7
CTNND1-213ENST00000526357 IFIT1BQ5T764 474 aaKnown RBP10.67□□□□□ -0.7
CTNND1-213ENST00000526357 FEZ2Q9UHY8 353 aaPredicted RBP10.67□□□□□ -0.7
CTNND1-213ENST00000526357 MTUS1Q9ULD2 1270 aa10.67□□□□□ -0.7
CTNND1-213ENST00000526357 MCM6Q14566 821 aa10.67□□□□□ -0.7
CTNND1-213ENST00000526357 TTC31Q49AM3 519 aaPredicted RBP10.67□□□□□ -0.7
CTNND1-213ENST00000526357 VPS52Q8N1B4 723 aa10.67□□□□□ -0.7
CTNND1-213ENST00000526357 SMARCC2Q8TAQ2 1214 aa10.67□□□□□ -0.7
CTNND1-213ENST00000526357 CCDC114Q96M63 670 aa10.67□□□□□ -0.7
CTNND1-213ENST00000526357 RNF216Q9NWF9 866 aaPredicted RBP10.67□□□□□ -0.7
CTNND1-213ENST00000526357 SKILP12757 684 aa10.67□□□□□ -0.7
CTNND1-213ENST00000526357 ASIC1P78348 528 aa10.67□□□□□ -0.7
CTNND1-213ENST00000526357 NUDT16Q96DE0 195 aaKnown RBP10.67□□□□□ -0.7
CTNND1-213ENST00000526357 PPP1R9BQ96SB3 815 aa10.67□□□□□ -0.7
CTNND1-213ENST00000526357 PFDN4Q9NQP4 134 aa10.67□□□□□ -0.7
CTNND1-213ENST00000526357 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.67□□□□□ -0.75e-6■■■□□ 17.3
CTNND1-213ENST00000526357 ATP6V0A2Q9Y487 856 aa10.67□□□□□ -0.7
CTNND1-213ENST00000526357 KIAA1107Q9UPP5 1409 aa10.67□□□□□ -0.7
CTNND1-213ENST00000526357 KIF21BO75037 1637 aa10.67□□□□□ -0.7
CTNND1-213ENST00000526357 DAPK1P53355 1430 aa10.67□□□□□ -0.7
CTNND1-213ENST00000526357 NEK11Q8NG66 645 aa10.67□□□□□ -0.7
CTNND1-213ENST00000526357 ZHX1Q9UKY1 873 aaPredicted RBP10.67□□□□□ -0.7
CTNND1-213ENST00000526357 LRRC9Q6ZRR7 1453 aa10.66□□□□□ -0.7
CTNND1-213ENST00000526357 TNNC1P63316 161 aa10.66□□□□□ -0.7
CTNND1-213ENST00000526357 SATB1Q01826 763 aa10.66□□□□□ -0.7
CTNND1-213ENST00000526357 CAPN2P17655 700 aa10.66□□□□□ -0.7
CTNND1-213ENST00000526357 MPRIPQ6WCQ1 1025 aa10.66□□□□□ -0.7
CTNND1-213ENST00000526357 INTS8Q75QN2 995 aaKnown RBP10.66□□□□□ -0.7
CTNND1-213ENST00000526357 TCHPQ9BT92 498 aa10.66□□□□□ -0.7
CTNND1-213ENST00000526357 ZSCAN22P10073 491 aaPredicted RBP10.66□□□□□ -0.7
CTNND1-213ENST00000526357 ZSCAN23Q3MJ62 389 aa10.66□□□□□ -0.7
CTNND1-213ENST00000526357 SEL1L2Q5TEA6 688 aa10.66□□□□□ -0.7
CTNND1-213ENST00000526357 DPH6Q7L8W6 267 aa10.66□□□□□ -0.7
CTNND1-213ENST00000526357 HEATR3Q7Z4Q2 680 aa10.66□□□□□ -0.7
CTNND1-213ENST00000526357 ZBTB43O43298 467 aa10.66□□□□□ -0.7
CTNND1-213ENST00000526357 ATP11AP98196 1134 aa10.66□□□□□ -0.7
CTNND1-213ENST00000526357 LDHAL6AQ6ZMR3 332 aa10.66□□□□□ -0.7
CTNND1-213ENST00000526357 CALCOCO2Q13137 446 aa10.65□□□□□ -0.7
CTNND1-213ENST00000526357 CACNA2D3Q8IZS8 1091 aa10.65□□□□□ -0.7
CTNND1-213ENST00000526357 GPR161Q8N6U8 529 aaKnown RBP10.65□□□□□ -0.7
CTNND1-213ENST00000526357 MRPS27Q92552 414 aaKnown RBP10.65□□□□□ -0.7
CTNND1-213ENST00000526357 ESR2Q92731 530 aa10.65□□□□□ -0.7
CTNND1-213ENST00000526357 IFT74Q96LB3 600 aa10.65□□□□□ -0.7
CTNND1-213ENST00000526357 ALG1Q9BT22 464 aa10.65□□□□□ -0.7
CTNND1-213ENST00000526357 CSRNP2Q9H175 543 aa10.65□□□□□ -0.7
CTNND1-213ENST00000526357 VCX3BQ9H321 246 aa10.65□□□□□ -0.7
CTNND1-213ENST00000526357 GDPD2Q9HCC8 539 aa10.65□□□□□ -0.7
CTNND1-213ENST00000526357 HMGB1P1B2RPK0 211 aaPredicted RBP10.65□□□□□ -0.7
CTNND1-213ENST00000526357 RTN1Q16799 776 aa10.65□□□□□ -0.7
CTNND1-213ENST00000526357 ANO6Q4KMQ2 910 aa10.65□□□□□ -0.7
CTNND1-213ENST00000526357 FYB2Q5VWT5 728 aa10.65□□□□□ -0.7
CTNND1-213ENST00000526357 AFAP1L2Q8N4X5 818 aa10.65□□□□□ -0.7
CTNND1-213ENST00000526357 NKIRAS1Q9NYS0 192 aa10.65□□□□□ -0.7
CTNND1-213ENST00000526357 NKTRP30414 1462 aaKnown RBP10.65□□□□□ -0.7
CTNND1-213ENST00000526357 TUBBP07437 444 aa10.65□□□□□ -0.7
CTNND1-213ENST00000526357 HAND2P61296 217 aa10.65□□□□□ -0.7
CTNND1-213ENST00000526357 MAP7Q14244 749 aa10.65□□□□□ -0.7
CTNND1-213ENST00000526357 GABPB2Q8TAK5 448 aaPredicted RBP10.65□□□□□ -0.7
CTNND1-213ENST00000526357 CCDC42Q96M95 316 aa10.65□□□□□ -0.7
CTNND1-213ENST00000526357 KLF18A0A0U1RQI7 1052 aa10.65□□□□□ -0.7
CTNND1-213ENST00000526357 SYT1P21579 422 aa10.65□□□□□ -0.7
CTNND1-213ENST00000526357 TERF1P54274 439 aa10.65□□□□□ -0.7
CTNND1-213ENST00000526357 SARNPP82979 210 aaKnown RBP10.65□□□□□ -0.7
CTNND1-213ENST00000526357 AFAP1Q8N556 730 aa10.65□□□□□ -0.7
CTNND1-213ENST00000526357 ANKRD24Q8TF21 1146 aa10.65□□□□□ -0.7
CTNND1-213ENST00000526357 SYNJ2O15056 1496 aa10.65□□□□□ -0.71
CTNND1-213ENST00000526357 TTC36A6NLP5 189 aa10.65□□□□□ -0.71
CTNND1-213ENST00000526357 PTGS1P23219 599 aa10.65□□□□□ -0.71
CTNND1-213ENST00000526357 VAV2P52735 878 aa10.65□□□□□ -0.71
CTNND1-213ENST00000526357 CLUL1Q15846 466 aa10.65□□□□□ -0.71
CTNND1-213ENST00000526357 INF2Q27J81 1249 aa10.65□□□□□ -0.71
CTNND1-213ENST00000526357 KLHL40Q2TBA0 621 aa10.65□□□□□ -0.71
CTNND1-213ENST00000526357 LARP6Q9BRS8 491 aaKnown RBP10.65□□□□□ -0.71
CTNND1-213ENST00000526357 MAP3K2Q9Y2U5 619 aa10.65□□□□□ -0.71
CTNND1-213ENST00000526357 CALM1P0DP23 149 aa10.64□□□□□ -0.71
CTNND1-213ENST00000526357 CALM2P0DP24 149 aa10.64□□□□□ -0.71
CTNND1-213ENST00000526357 CALM3P0DP25 149 aa10.64□□□□□ -0.71
CTNND1-213ENST00000526357 ARID4AP29374 1257 aaPredicted RBP10.64□□□□□ -0.71
CTNND1-213ENST00000526357 NAPAP54920 295 aa10.64□□□□□ -0.71
CTNND1-213ENST00000526357 CEP85LQ5SZL2 805 aa10.64□□□□□ -0.71
CTNND1-213ENST00000526357 FAM212AQ96EL1 285 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms