RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 KCNF1Q9H3M0 494 aa9.19□□□□□ -0.94
C11orf54-203ENST00000526335 PIM2Q9P1W9 311 aa9.19□□□□□ -0.94
C11orf54-203ENST00000526335 CCDC39Q9UFE4 941 aa9.19□□□□□ -0.94
C11orf54-203ENST00000526335 SASH3O75995 380 aa9.18□□□□□ -0.94
C11orf54-203ENST00000526335 GRNP28799 593 aaKnown RBP9.18□□□□□ -0.94
C11orf54-203ENST00000526335 ATAD2Q6PL18 1390 aa9.17□□□□□ -0.94
C11orf54-203ENST00000526335 NRLP54845 237 aa9.17□□□□□ -0.94
C11orf54-203ENST00000526335 FAM20CQ8IXL6 584 aa9.17□□□□□ -0.94
C11orf54-203ENST00000526335 FBXL18Q96ME1 805 aa9.17□□□□□ -0.94
C11orf54-203ENST00000526335 TGFBR3LH3BV60 316 aa9.16□□□□□ -0.94
C11orf54-203ENST00000526335 J3QW42 95 aa9.16□□□□□ -0.94
C11orf54-203ENST00000526335 C21orf2O43822 256 aa9.16□□□□□ -0.94
C11orf54-203ENST00000526335 KRTAP5-3Q6L8H2 238 aa9.16□□□□□ -0.94
C11orf54-203ENST00000526335 BEND4Q6ZU67 534 aa9.16□□□□□ -0.94
C11orf54-203ENST00000526335 STAG2Q8N3U4 1231 aa9.16□□□□□ -0.94
C11orf54-203ENST00000526335 GALNT11Q8NCW6 608 aa9.16□□□□□ -0.94
C11orf54-203ENST00000526335 CHMP7Q8WUX9 453 aaPredicted RBP9.16□□□□□ -0.94
C11orf54-203ENST00000526335 SCG3Q8WXD2 468 aaKnown RBP9.16□□□□□ -0.94
C11orf54-203ENST00000526335 GTF3C3Q9Y5Q9 886 aa9.16□□□□□ -0.94
C11orf54-203ENST00000526335 RASA1P20936 1047 aa9.15□□□□□ -0.94
C11orf54-203ENST00000526335 GAS2L2Q8NHY3 880 aa9.15□□□□□ -0.94
C11orf54-203ENST00000526335 C2orf49Q9BVC5 232 aaPredicted RBP9.15□□□□□ -0.94
C11orf54-203ENST00000526335 DMGDHQ9UI17 866 aaKnown RBP9.15□□□□□ -0.94
C11orf54-203ENST00000526335 TIMELESSQ9UNS1 1208 aa9.15□□□□□ -0.94
C11orf54-203ENST00000526335 DKK1O94907 266 aa9.14□□□□□ -0.95
C11orf54-203ENST00000526335 SEC13P55735 322 aa9.14□□□□□ -0.95
C11orf54-203ENST00000526335 MFSD14AQ96MC6 490 aa9.14□□□□□ -0.95
C11orf54-203ENST00000526335 LEMD3Q9Y2U8 911 aa9.14□□□□□ -0.95
C11orf54-203ENST00000526335 GHRHP01286 108 aa9.13□□□□□ -0.95
C11orf54-203ENST00000526335 BMP3P12645 472 aa9.13□□□□□ -0.95
C11orf54-203ENST00000526335 ATG3Q9NT62 314 aa9.13□□□□□ -0.95
C11orf54-203ENST00000526335 PPME1Q9Y570 386 aa9.13□□□□□ -0.95
C11orf54-203ENST00000526335 LOC102724428A0A0B4J2F2 783 aa9.12□□□□□ -0.95
C11orf54-203ENST00000526335 ZNF865P0CJ78 1059 aaPredicted RBP9.12□□□□□ -0.95
C11orf54-203ENST00000526335 CD68P34810 354 aaPredicted RBP9.12□□□□□ -0.95
C11orf54-203ENST00000526335 SIK1P57059 783 aa9.12□□□□□ -0.95
C11orf54-203ENST00000526335 MUC3BQ9H195 1237 aa9.12□□□□□ -0.95
C11orf54-203ENST00000526335 BCS1LQ9Y276 419 aa9.12□□□□□ -0.95
C11orf54-203ENST00000526335 SART1O43290 800 aaKnown RBP9.12□□□□□ -0.95
C11orf54-203ENST00000526335 INPP5BP32019 993 aa9.12□□□□□ -0.95
C11orf54-203ENST00000526335 COL19A1Q14993 1142 aa9.12□□□□□ -0.95
C11orf54-203ENST00000526335 PKN1Q16512 942 aa9.12□□□□□ -0.95
C11orf54-203ENST00000526335 MSMPQ1L6U9 139 aa9.12□□□□□ -0.95
C11orf54-203ENST00000526335 VSIG10LQ86VR7 867 aa9.12□□□□□ -0.95
C11orf54-203ENST00000526335 RBSNQ9H1K0 784 aa9.12□□□□□ -0.95
C11orf54-203ENST00000526335 KCNK4Q9NYG8 393 aa9.12□□□□□ -0.95
C11orf54-203ENST00000526335 TLR7Q9NYK1 1049 aaKnown RBP9.12□□□□□ -0.95
C11orf54-203ENST00000526335 TRIM33Q9UPN9 1127 aa9.12□□□□□ -0.95
C11orf54-203ENST00000526335 LINC01387J3KSC0 135 aa9.11□□□□□ -0.95
C11orf54-203ENST00000526335 IDH3AP50213 366 aa9.11□□□□□ -0.95
C11orf54-203ENST00000526335 RTN1Q16799 776 aa9.11□□□□□ -0.95
C11orf54-203ENST00000526335 NFXL1Q6ZNB6 911 aa9.11□□□□□ -0.95
C11orf54-203ENST00000526335 KIAA1211Q6ZU35 1233 aa9.11□□□□□ -0.95
C11orf54-203ENST00000526335 GIMAP7Q8NHV1 300 aa9.11□□□□□ -0.95
C11orf54-203ENST00000526335 HINFPQ9BQA5 517 aa9.11□□□□□ -0.95
C11orf54-203ENST00000526335 TFIP11Q9UBB9 837 aaKnown RBP9.11□□□□□ -0.95
C11orf54-203ENST00000526335 LARP1Q6PKG0 1096 aaKnown RBP9.1□□□□□ -0.95
C11orf54-203ENST00000526335 PRNPP04156 253 aa9.09□□□□□ -0.95
C11orf54-203ENST00000526335 FOSL1P15407 271 aa9.09□□□□□ -0.95
C11orf54-203ENST00000526335 DUOXA2Q1HG44 320 aa9.09□□□□□ -0.95
C11orf54-203ENST00000526335 GLMNQ92990 594 aa9.09□□□□□ -0.95
C11orf54-203ENST00000526335 NSUN5Q96P11 429 aaKnown RBP9.09□□□□□ -0.95
C11orf54-203ENST00000526335 MAFBQ9Y5Q3 323 aaPredicted RBP9.09□□□□□ -0.95
C11orf54-203ENST00000526335 FBXL6Q8N531 539 aa9.08□□□□□ -0.96
C11orf54-203ENST00000526335 TMEM132AQ24JP5 1023 aa9.07□□□□□ -0.96
C11orf54-203ENST00000526335 TXNDC11Q6PKC3 985 aa9.07□□□□□ -0.96
C11orf54-203ENST00000526335 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.07□□□□□ -0.96
C11orf54-203ENST00000526335 CACTIN-AS1Q8N1I8 211 aa9.07□□□□□ -0.96
C11orf54-203ENST00000526335 OSBPL1AQ9BXW6 950 aa9.07□□□□□ -0.96
C11orf54-203ENST00000526335 C11orf16Q9NQ32 467 aa9.07□□□□□ -0.96
C11orf54-203ENST00000526335 FARP2O94887 1054 aaPredicted RBP9.06□□□□□ -0.96
C11orf54-203ENST00000526335 PAPLNO95428 1278 aa9.06□□□□□ -0.96
C11orf54-203ENST00000526335 PSAPP07602 524 aa9.06□□□□□ -0.96
C11orf54-203ENST00000526335 IGFBP4P22692 258 aa9.06□□□□□ -0.96
C11orf54-203ENST00000526335 ARSDP51689 593 aa9.06□□□□□ -0.96
C11orf54-203ENST00000526335 DPYDQ12882 1025 aa9.06□□□□□ -0.96
C11orf54-203ENST00000526335 COL26A1Q96A83 441 aa9.06□□□□□ -0.96
C11orf54-203ENST00000526335 LGR5O75473 907 aa9.05□□□□□ -0.96
C11orf54-203ENST00000526335 PROSER2Q86WR7 435 aaPredicted RBP9.05□□□□□ -0.96
C11orf54-203ENST00000526335 F13BP05160 661 aa9.04□□□□□ -0.96
C11orf54-203ENST00000526335 CDC25BP30305 580 aa9.04□□□□□ -0.96
C11orf54-203ENST00000526335 PREPP48147 710 aa9.04□□□□□ -0.96
C11orf54-203ENST00000526335 CRTC2Q53ET0 693 aaPredicted RBP9.04□□□□□ -0.96
C11orf54-203ENST00000526335 AGBL5Q8NDL9 886 aa9.04□□□□□ -0.96
C11orf54-203ENST00000526335 FLCNQ8NFG4 579 aa9.04□□□□□ -0.96
C11orf54-203ENST00000526335 CLUAP1Q96AJ1 413 aa9.04□□□□□ -0.96
C11orf54-203ENST00000526335 CARD10Q9BWT7 1032 aa9.04□□□□□ -0.96
C11orf54-203ENST00000526335 PRRG2O14669 202 aa9.03□□□□□ -0.96
C11orf54-203ENST00000526335 PTK7Q13308 1070 aa9.03□□□□□ -0.96
C11orf54-203ENST00000526335 KSR1Q8IVT5 923 aa9.03□□□□□ -0.96
C11orf54-203ENST00000526335 KLK14Q9P0G3 267 aa9.03□□□□□ -0.96
C11orf54-203ENST00000526335 NCANO14594 1321 aa9.03□□□□□ -0.96
C11orf54-203ENST00000526335 LILRA6Q6PI73 481 aa9.02□□□□□ -0.97
C11orf54-203ENST00000526335 UBASH3BQ8TF42 649 aa9.02□□□□□ -0.97
C11orf54-203ENST00000526335 BSDC1Q9NW68 430 aaPredicted RBP9.02□□□□□ -0.97
C11orf54-203ENST00000526335 HIF3AQ9Y2N7 669 aa9.02□□□□□ -0.97
C11orf54-203ENST00000526335 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.02□□□□□ -0.97
C11orf54-203ENST00000526335 USP17L15C9J2P7 530 aa9.01□□□□□ -0.97
C11orf54-203ENST00000526335 USP17L10C9JJH3 530 aa9.01□□□□□ -0.97
C11orf54-203ENST00000526335 USP17L13C9JLJ4 530 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms