RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 GMPSP49915 693 aaPredicted RBP17.08■□□□□ 0.32
USH1C-203ENST00000526181 DIEXFQ68CQ4 756 aaKnown RBP17.08■□□□□ 0.32
USH1C-203ENST00000526181 PNMA8AQ86V59 439 aaPredicted RBP17.08■□□□□ 0.32
USH1C-203ENST00000526181 SSH1Q8WYL5 1049 aa17.08■□□□□ 0.32
USH1C-203ENST00000526181 CLEC11AQ9Y240 323 aa17.08■□□□□ 0.32
USH1C-203ENST00000526181 ECE2O60344 883 aa17.07■□□□□ 0.32
USH1C-203ENST00000526181 CSF1RP07333 972 aa17.07■□□□□ 0.32
USH1C-203ENST00000526181 ITGA6P23229 1130 aa17.07■□□□□ 0.32
USH1C-203ENST00000526181 FOXO4P98177 505 aa17.07■□□□□ 0.32
USH1C-203ENST00000526181 MAP1SQ66K74 1059 aaPredicted RBP17.07■□□□□ 0.32
USH1C-203ENST00000526181 TRMT2AQ8IZ69 625 aaKnown RBP17.07■□□□□ 0.32
USH1C-203ENST00000526181 EYA3Q99504 573 aa17.07■□□□□ 0.32
USH1C-203ENST00000526181 KCNQ5Q9NR82 932 aa17.07■□□□□ 0.32
USH1C-203ENST00000526181 GPRC5DQ9NZD1 345 aa17.07■□□□□ 0.32
USH1C-203ENST00000526181 GGA1Q9UJY5 639 aa17.07■□□□□ 0.32
USH1C-203ENST00000526181 CACNA1FO60840 1977 aa17.07■□□□□ 0.32
USH1C-203ENST00000526181 MYH3P11055 1940 aa17.06■□□□□ 0.32
USH1C-203ENST00000526181 XDHP47989 1333 aa17.06■□□□□ 0.32
USH1C-203ENST00000526181 BSDC1Q9NW68 430 aaPredicted RBP17.06■□□□□ 0.32
USH1C-203ENST00000526181 MINPP1Q9UNW1 487 aa17.06■□□□□ 0.32
USH1C-203ENST00000526181 PASKQ96RG2 1323 aa17.05■□□□□ 0.32
USH1C-203ENST00000526181 CEP350Q5VT06 3117 aa17.05■□□□□ 0.32
USH1C-203ENST00000526181 SHTN1A0MZ66 631 aa17.05■□□□□ 0.32
USH1C-203ENST00000526181 GRM8O00222 908 aa17.05■□□□□ 0.32
USH1C-203ENST00000526181 PSMD14O00487 310 aa17.05■□□□□ 0.32
USH1C-203ENST00000526181 ITGBL1O95965 494 aaPredicted RBP17.05■□□□□ 0.32
USH1C-203ENST00000526181 TNIP1Q15025 636 aa17.05■□□□□ 0.32
USH1C-203ENST00000526181 EPHA10Q5JZY3 1008 aa17.05■□□□□ 0.32
USH1C-203ENST00000526181 ZC3H12CQ9C0D7 883 aaKnown RBP17.05■□□□□ 0.32
USH1C-203ENST00000526181 SRCIN1Q9C0H9 1055 aa17.05■□□□□ 0.32
USH1C-203ENST00000526181 ZBTB12Q9Y330 459 aaPredicted RBP17.05■□□□□ 0.32
USH1C-203ENST00000526181 ALDH1L1O75891 902 aa17.04■□□□□ 0.32
USH1C-203ENST00000526181 IGHMBP2P38935 993 aaKnown RBP17.04■□□□□ 0.32
USH1C-203ENST00000526181 ATP2B4P23634 1241 aa17.03■□□□□ 0.32
USH1C-203ENST00000526181 USP50Q70EL3 339 aaPredicted RBP17.03■□□□□ 0.32
USH1C-203ENST00000526181 CNTROBQ8N137 903 aa17.03■□□□□ 0.32
USH1C-203ENST00000526181 KLRG1Q96E93 195 aa17.03■□□□□ 0.32
USH1C-203ENST00000526181 C9orf78Q9NZ63 289 aaPredicted RBP17.03■□□□□ 0.32
USH1C-203ENST00000526181 PTPRCP08575 1304 aa17.02■□□□□ 0.32
USH1C-203ENST00000526181 NBPF7P0C2Y1 421 aaPredicted RBP17.02■□□□□ 0.32
USH1C-203ENST00000526181 LMBR1LQ6UX01 489 aa17.02■□□□□ 0.32
USH1C-203ENST00000526181 ADARB2Q9NS39 739 aaKnown RBP17.02■□□□□ 0.32
USH1C-203ENST00000526181 SMC4Q9NTJ3 1288 aa17.02■□□□□ 0.32
USH1C-203ENST00000526181 CHMP3Q9Y3E7 222 aa17.02■□□□□ 0.32
USH1C-203ENST00000526181 ANKRD18BA2A2Z9 1011 aa17.01■□□□□ 0.31
USH1C-203ENST00000526181 G3V3G9 751 aa17.01■□□□□ 0.31
USH1C-203ENST00000526181 CCT4P50991 539 aaKnown RBP17.01■□□□□ 0.31
USH1C-203ENST00000526181 HIRAP54198 1017 aaPredicted RBP17.01■□□□□ 0.31
USH1C-203ENST00000526181 FMR1Q06787 632 aaKnown RBP eCLIP17.01■□□□□ 0.31
USH1C-203ENST00000526181 ALDH1L2Q3SY69 923 aa17.01■□□□□ 0.31
USH1C-203ENST00000526181 DCAF8Q5TAQ9 597 aa17.01■□□□□ 0.31
USH1C-203ENST00000526181 MICALL2Q8IY33 904 aa17.01■□□□□ 0.31
USH1C-203ENST00000526181 TRPM4Q8TD43 1214 aa17.01■□□□□ 0.31
USH1C-203ENST00000526181 KAZALD1Q96I82 304 aa17.01■□□□□ 0.31
USH1C-203ENST00000526181 SUCLG2Q96I99 432 aa17.01■□□□□ 0.31
USH1C-203ENST00000526181 MPHOSPH8Q99549 860 aa17.01■□□□□ 0.31
USH1C-203ENST00000526181 CNOT7Q9UIV1 285 aaKnown RBP17.01■□□□□ 0.31
USH1C-203ENST00000526181 MED23Q9ULK4 1368 aa17.01■□□□□ 0.31
USH1C-203ENST00000526181 KLRK1P26718 216 aa17■□□□□ 0.31
USH1C-203ENST00000526181 IFIT5Q13325 482 aaKnown RBP17■□□□□ 0.31
USH1C-203ENST00000526181 TXNRD3Q86VQ6 643 aa17■□□□□ 0.31
USH1C-203ENST00000526181 ZNF594Q96JF6 807 aaPredicted RBP17■□□□□ 0.31
USH1C-203ENST00000526181 CREBZFQ9NS37 354 aa17■□□□□ 0.31
USH1C-203ENST00000526181 EGFRP00533 1210 aa16.99■□□□□ 0.31
USH1C-203ENST00000526181 CHRNDQ07001 517 aa16.99■□□□□ 0.31
USH1C-203ENST00000526181 SCN9AQ15858 1988 aa16.98■□□□□ 0.31
USH1C-203ENST00000526181 UTYO14607 1347 aa16.98■□□□□ 0.31
USH1C-203ENST00000526181 TRAF5O00463 557 aa16.98■□□□□ 0.31
USH1C-203ENST00000526181 SAMD7Q7Z3H4 446 aa16.98■□□□□ 0.31
USH1C-203ENST00000526181 JMYQ8N9B5 988 aa16.98■□□□□ 0.31
USH1C-203ENST00000526181 DPF2Q92785 391 aa16.98■□□□□ 0.31
USH1C-203ENST00000526181 MKRN1Q9UHC7 482 aaKnown RBP16.98■□□□□ 0.31
USH1C-203ENST00000526181 ZNF804BA4D1E1 1349 aa16.97■□□□□ 0.31
USH1C-203ENST00000526181 SNAP23O00161 211 aa16.97■□□□□ 0.31
USH1C-203ENST00000526181 TAF5LO75529 589 aa16.97■□□□□ 0.31
USH1C-203ENST00000526181 VIL1P09327 827 aaKnown RBP16.97■□□□□ 0.31
USH1C-203ENST00000526181 CCDC57Q2TAC2 916 aa16.97■□□□□ 0.31
USH1C-203ENST00000526181 HELBQ8NG08 1087 aaPredicted RBP16.97■□□□□ 0.31
USH1C-203ENST00000526181 ANKRD2Q9GZV1 360 aa16.97■□□□□ 0.31
USH1C-203ENST00000526181 LEMD3Q9Y2U8 911 aa16.97■□□□□ 0.31
USH1C-203ENST00000526181 TMEM88BA6NKF7 163 aa16.96■□□□□ 0.31
USH1C-203ENST00000526181 H7C1D1 291 aa16.96■□□□□ 0.31
USH1C-203ENST00000526181 CT47B1P0C2W7 299 aaPredicted RBP16.96■□□□□ 0.31
USH1C-203ENST00000526181 RPS12P25398 132 aaKnown RBP16.96■□□□□ 0.31
USH1C-203ENST00000526181 TBC1D10BQ4KMP7 808 aaPredicted RBP16.96■□□□□ 0.31
USH1C-203ENST00000526181 BICC1Q9H694 974 aaKnown RBP16.96■□□□□ 0.31
USH1C-203ENST00000526181 NOB1Q9ULX3 412 aaKnown RBP16.96■□□□□ 0.31
USH1C-203ENST00000526181 A0A1B0GUL6 1792 aa16.96■□□□□ 0.31
USH1C-203ENST00000526181 RARSP54136 660 aaKnown RBP16.95■□□□□ 0.3
USH1C-203ENST00000526181 HNRNPUQ00839 825 aaKnown RBP eCLIP16.95■□□□□ 0.3
USH1C-203ENST00000526181 RBM26Q5T8P6 1007 aaKnown RBP16.95■□□□□ 0.3
USH1C-203ENST00000526181 RSBN1LQ6PCB5 846 aaPredicted RBP16.95■□□□□ 0.3
USH1C-203ENST00000526181 PODNQ7Z5L7 613 aa16.95■□□□□ 0.3
USH1C-203ENST00000526181 ANKRD44Q8N8A2 993 aa16.95■□□□□ 0.3
USH1C-203ENST00000526181 MXD3Q9BW11 206 aa16.95■□□□□ 0.3
USH1C-203ENST00000526181 GLIS2Q9BZE0 524 aaPredicted RBP16.95■□□□□ 0.3
USH1C-203ENST00000526181 USP44Q9H0E7 712 aa16.95■□□□□ 0.3
USH1C-203ENST00000526181 PGAP2Q9UHJ9 254 aa16.95■□□□□ 0.3
USH1C-203ENST00000526181 IRS2Q9Y4H2 1338 aa16.95■□□□□ 0.3
USH1C-203ENST00000526181 USP17L3A6NCW0 530 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms