RNA–Protein interactions for RNA: ENST00000525508.1

CHD7-203, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 5 BASIC

Gene CHD7, Length 4,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-203ENST00000525508 SLF2Q8IX21 1173 aa9.58□□□□□ -0.88
CHD7-203ENST00000525508 HMG20BQ9P0W2 317 aa9.58□□□□□ -0.88
CHD7-203ENST00000525508 PZPP20742 1482 aa9.58□□□□□ -0.88
CHD7-203ENST00000525508 ABCC10Q5T3U5 1492 aa9.58□□□□□ -0.88
CHD7-203ENST00000525508 A0A1B0GUL7 405 aa9.58□□□□□ -0.88
CHD7-203ENST00000525508 CREB3L3Q68CJ9 461 aa9.58□□□□□ -0.88
CHD7-203ENST00000525508 CUL5Q93034 780 aa9.58□□□□□ -0.88
CHD7-203ENST00000525508 FAM227BQ96M60 508 aa9.58□□□□□ -0.88
CHD7-203ENST00000525508 TSPYL1Q9H0U9 437 aa9.58□□□□□ -0.88
CHD7-203ENST00000525508 ANKRD62A6NC57 917 aa9.58□□□□□ -0.88
CHD7-203ENST00000525508 CCDC102BQ68D86 513 aa9.58□□□□□ -0.88
CHD7-203ENST00000525508 USP19O94966 1318 aa9.58□□□□□ -0.88
CHD7-203ENST00000525508 SYKP43405 635 aa9.58□□□□□ -0.88
CHD7-203ENST00000525508 UBE2HP62256 183 aa9.58□□□□□ -0.88
CHD7-203ENST00000525508 ZSCAN23Q3MJ62 389 aa9.58□□□□□ -0.88
CHD7-203ENST00000525508 RAB34Q9BZG1 259 aa9.58□□□□□ -0.88
CHD7-203ENST00000525508 DDX19AQ9NUU7 478 aaKnown RBP9.58□□□□□ -0.88
CHD7-203ENST00000525508 RNF216Q9NWF9 866 aaPredicted RBP9.58□□□□□ -0.88
CHD7-203ENST00000525508 SETQ01105 290 aaPredicted RBP9.57□□□□□ -0.88
CHD7-203ENST00000525508 UIMC1Q96RL1 719 aa9.57□□□□□ -0.88
CHD7-203ENST00000525508 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.57□□□□□ -0.88
CHD7-203ENST00000525508 RBM25P49756 843 aaKnown RBP9.57□□□□□ -0.88
CHD7-203ENST00000525508 CCDC102AQ96A19 550 aa9.57□□□□□ -0.88
CHD7-203ENST00000525508 CHL1O00533 1208 aa9.57□□□□□ -0.88
CHD7-203ENST00000525508 ZFYP08048 801 aaPredicted RBP9.57□□□□□ -0.88
CHD7-203ENST00000525508 EIF6P56537 245 aaKnown RBP9.57□□□□□ -0.88
CHD7-203ENST00000525508 TNIP1Q15025 636 aa9.57□□□□□ -0.88
CHD7-203ENST00000525508 OGFOD1Q8N543 542 aa9.57□□□□□ -0.88
CHD7-203ENST00000525508 ERCC4Q92889 916 aaPredicted RBP9.57□□□□□ -0.88
CHD7-203ENST00000525508 NCOA5Q9HCD5 579 aaKnown RBP9.57□□□□□ -0.88
CHD7-203ENST00000525508 LMTK3Q96Q04 1460 aa9.57□□□□□ -0.88
CHD7-203ENST00000525508 PDIA4P13667 645 aaKnown RBP9.56□□□□□ -0.88
CHD7-203ENST00000525508 ITGA6P23229 1130 aa9.56□□□□□ -0.88
CHD7-203ENST00000525508 OTUD7BQ6GQQ9 843 aa9.56□□□□□ -0.88
CHD7-203ENST00000525508 DNAJC25Q9H1X3 360 aa9.56□□□□□ -0.88
CHD7-203ENST00000525508 MAGEB6P1A0A0J9YX57 407 aa9.56□□□□□ -0.88
CHD7-203ENST00000525508 MYO1BO43795 1136 aa9.56□□□□□ -0.88
CHD7-203ENST00000525508 PPP1R12BO60237 982 aaPredicted RBP9.56□□□□□ -0.88
CHD7-203ENST00000525508 LMOD1P29536 600 aaPredicted RBP9.56□□□□□ -0.88
CHD7-203ENST00000525508 KLHL40Q2TBA0 621 aa9.56□□□□□ -0.88
CHD7-203ENST00000525508 FKBP15Q5T1M5 1219 aa9.56□□□□□ -0.88
CHD7-203ENST00000525508 FAM182BQ5T319 152 aa9.56□□□□□ -0.88
CHD7-203ENST00000525508 SMARCC1Q92922 1105 aaPredicted RBP9.56□□□□□ -0.88
CHD7-203ENST00000525508 KIAA0556O60303 1618 aa9.56□□□□□ -0.88
CHD7-203ENST00000525508 MBD4O95243 580 aa9.56□□□□□ -0.88
CHD7-203ENST00000525508 SPA17Q15506 151 aa9.56□□□□□ -0.88
CHD7-203ENST00000525508 CCDC40Q4G0X9 1142 aa9.56□□□□□ -0.88
CHD7-203ENST00000525508 KRI1Q8N9T8 703 aaKnown RBP9.56□□□□□ -0.88
CHD7-203ENST00000525508 SUCLG2Q96I99 432 aa9.56□□□□□ -0.88
CHD7-203ENST00000525508 CLCN1P35523 988 aa9.56□□□□□ -0.88
CHD7-203ENST00000525508 STX17P56962 302 aa9.56□□□□□ -0.88
CHD7-203ENST00000525508 SAP30BPQ9UHR5 308 aaKnown RBP9.56□□□□□ -0.88
CHD7-203ENST00000525508 B4E1Z4 1266 aa9.55□□□□□ -0.88
CHD7-203ENST00000525508 RNF113AO15541 343 aaKnown RBP9.55□□□□□ -0.88
CHD7-203ENST00000525508 ANO6Q4KMQ2 910 aa9.55□□□□□ -0.88
CHD7-203ENST00000525508 CCDC178Q5BJE1 867 aa9.55□□□□□ -0.88
CHD7-203ENST00000525508 ZNF397Q8NF99 534 aaPredicted RBP9.55□□□□□ -0.88
CHD7-203ENST00000525508 CALML4Q96GE6 196 aa9.55□□□□□ -0.88
CHD7-203ENST00000525508 NUP160Q12769 1436 aa9.55□□□□□ -0.88
CHD7-203ENST00000525508 N4BP3O15049 544 aa9.55□□□□□ -0.88
CHD7-203ENST00000525508 SP4Q02446 784 aa9.55□□□□□ -0.88
CHD7-203ENST00000525508 TAF4BQ92750 862 aa9.55□□□□□ -0.88
CHD7-203ENST00000525508 TTC12Q9H892 705 aaPredicted RBP9.55□□□□□ -0.88
CHD7-203ENST00000525508 TEX14Q8IWB6 1497 aa9.55□□□□□ -0.88
CHD7-203ENST00000525508 KCNQ4P56696 695 aa9.55□□□□□ -0.88
CHD7-203ENST00000525508 DHX58Q96C10 678 aa9.55□□□□□ -0.88
CHD7-203ENST00000525508 MYL10Q9BUA6 226 aa9.55□□□□□ -0.88
CHD7-203ENST00000525508 SLAIN2Q9P270 581 aa9.55□□□□□ -0.88
CHD7-203ENST00000525508 CCNL1Q9UK58 526 aaPredicted RBP9.55□□□□□ -0.88
CHD7-203ENST00000525508 WDR62O43379 1518 aa9.55□□□□□ -0.88
CHD7-203ENST00000525508 ERICH4A6NGS2 130 aa9.55□□□□□ -0.88
CHD7-203ENST00000525508 NAPAP54920 295 aa9.55□□□□□ -0.88
CHD7-203ENST00000525508 IL17REQ8NFR9 667 aa9.55□□□□□ -0.88
CHD7-203ENST00000525508 USP26Q9BXU7 913 aa9.55□□□□□ -0.88
CHD7-203ENST00000525508 KRT23Q9C075 422 aa9.55□□□□□ -0.88
CHD7-203ENST00000525508 DISP1Q96F81 1524 aa9.54□□□□□ -0.88
CHD7-203ENST00000525508 hCG_1642624A0A1W2PR95 340 aa9.54□□□□□ -0.88
CHD7-203ENST00000525508 PTPDC1A2A3K4 754 aa9.54□□□□□ -0.88
CHD7-203ENST00000525508 F13A1P00488 732 aa9.54□□□□□ -0.88
CHD7-203ENST00000525508 PTGS1P23219 599 aa9.54□□□□□ -0.88
CHD7-203ENST00000525508 EYA2O00167 538 aa9.54□□□□□ -0.88
CHD7-203ENST00000525508 RDXP35241 583 aaKnown RBP9.54□□□□□ -0.88
CHD7-203ENST00000525508 TNNI2P48788 182 aa9.54□□□□□ -0.88
CHD7-203ENST00000525508 KIF18AQ8NI77 898 aa9.54□□□□□ -0.88
CHD7-203ENST00000525508 TRIM47Q96LD4 638 aa9.54□□□□□ -0.88
CHD7-203ENST00000525508 TSG101Q99816 390 aa9.54□□□□□ -0.88
CHD7-203ENST00000525508 SH3TC1Q8TE82 1336 aa9.54□□□□□ -0.88
CHD7-203ENST00000525508 CTAGE5O15320 804 aa9.54□□□□□ -0.88
CHD7-203ENST00000525508 XRCC6P12956 609 aaKnown RBP eCLIP9.54□□□□□ -0.88
CHD7-203ENST00000525508 SYT1P21579 422 aa9.54□□□□□ -0.88
CHD7-203ENST00000525508 STX1AQ16623 288 aa9.54□□□□□ -0.88
CHD7-203ENST00000525508 SYCP3Q8IZU3 236 aa9.54□□□□□ -0.88
CHD7-203ENST00000525508 ARMT1Q9H993 441 aa9.54□□□□□ -0.88
CHD7-203ENST00000525508 MYO6Q9UM54 1294 aa9.54□□□□□ -0.88
CHD7-203ENST00000525508 CCDC186Q7Z3E2 898 aa9.54□□□□□ -0.88
CHD7-203ENST00000525508 PCDH11XQ9BZA7 1347 aa9.54□□□□□ -0.88
CHD7-203ENST00000525508 PCDH11YQ9BZA8 1340 aa9.54□□□□□ -0.88
CHD7-203ENST00000525508 GOLGA6L10A6NI86 522 aa9.53□□□□□ -0.88
CHD7-203ENST00000525508 PRPF4BQ13523 1007 aaKnown RBP9.53□□□□□ -0.88
CHD7-203ENST00000525508 TRAPPC3LQ5T215 181 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms