RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 FGFR3P22607 806 aa7.6□□□□□ -1.19
USP47-206ENST00000525367 CES1P23141 567 aa7.6□□□□□ -1.19
USP47-206ENST00000525367 GALNT12Q8IXK2 581 aa7.6□□□□□ -1.19
USP47-206ENST00000525367 GPR161Q8N6U8 529 aaKnown RBP7.6□□□□□ -1.19
USP47-206ENST00000525367 OR13H1Q8NG92 308 aa7.6□□□□□ -1.19
USP47-206ENST00000525367 USP35Q9P2H5 1018 aa7.6□□□□□ -1.19
USP47-206ENST00000525367 ATXN7L1Q9ULK2 861 aaPredicted RBP7.6□□□□□ -1.19
USP47-206ENST00000525367 C2CD2LO14523 706 aa7.59□□□□□ -1.19
USP47-206ENST00000525367 TRPA1O75762 1119 aa7.59□□□□□ -1.19
USP47-206ENST00000525367 HDLBPQ00341 1268 aaKnown RBP7.59□□□□□ -1.19
USP47-206ENST00000525367 MLLT1Q03111 559 aaPredicted RBP7.59□□□□□ -1.19
USP47-206ENST00000525367 LAMC2Q13753 1193 aa7.59□□□□□ -1.19
USP47-206ENST00000525367 PEAR1Q5VY43 1037 aaPredicted RBP7.59□□□□□ -1.19
USP47-206ENST00000525367 TMEM87AQ8NBN3 555 aa7.59□□□□□ -1.19
USP47-206ENST00000525367 PNMA5Q96PV4 448 aa7.59□□□□□ -1.19
USP47-206ENST00000525367 AK5Q9Y6K8 562 aa7.59□□□□□ -1.19
USP47-206ENST00000525367 GADD45BO75293 160 aaPredicted RBP7.58□□□□□ -1.2
USP47-206ENST00000525367 ZNF385CQ66K41 422 aaPredicted RBP7.58□□□□□ -1.2
USP47-206ENST00000525367 NXPE4Q6UWF7 544 aa7.58□□□□□ -1.2
USP47-206ENST00000525367 CNTNAP3BQ96NU0 1288 aa7.58□□□□□ -1.2
USP47-206ENST00000525367 NSUN5Q96P11 429 aaKnown RBP7.58□□□□□ -1.2
USP47-206ENST00000525367 CNTNAP3Q9BZ76 1288 aa7.58□□□□□ -1.2
USP47-206ENST00000525367 C12orf49Q9H741 205 aa7.58□□□□□ -1.2
USP47-206ENST00000525367 SPG7Q9UQ90 795 aa7.58□□□□□ -1.2
USP47-206ENST00000525367 A0A1W2PP55 124 aa7.57□□□□□ -1.2
USP47-206ENST00000525367 FGD1P98174 961 aa7.57□□□□□ -1.2
USP47-206ENST00000525367 GRM2Q14416 872 aa7.57□□□□□ -1.2
USP47-206ENST00000525367 XP32Q5T750 250 aa7.57□□□□□ -1.2
USP47-206ENST00000525367 MEI1Q5TIA1 1274 aa7.57□□□□□ -1.2
USP47-206ENST00000525367 HHIPQ96QV1 700 aa7.57□□□□□ -1.2
USP47-206ENST00000525367 BCO2Q9BYV7 579 aa7.57□□□□□ -1.2
USP47-206ENST00000525367 C11orf16Q9NQ32 467 aa7.57□□□□□ -1.2
USP47-206ENST00000525367 NLRP2Q9NX02 1062 aa7.57□□□□□ -1.2
USP47-206ENST00000525367 SALL4Q9UJQ4 1053 aa7.57□□□□□ -1.2
USP47-206ENST00000525367 PHF20L1A8MW92 1017 aa7.56□□□□□ -1.2
USP47-206ENST00000525367 ZBTB42B2RXF5 422 aa7.56□□□□□ -1.2
USP47-206ENST00000525367 EIF4BP23588 611 aaKnown RBP7.56□□□□□ -1.2
USP47-206ENST00000525367 GAS6Q14393 721 aa7.56□□□□□ -1.2
USP47-206ENST00000525367 GPAT2Q6NUI2 795 aa7.56□□□□□ -1.2
USP47-206ENST00000525367 HFE2Q6ZVN8 426 aa7.56□□□□□ -1.2
USP47-206ENST00000525367 DHX32Q7L7V1 743 aaKnown RBP7.56□□□□□ -1.2
USP47-206ENST00000525367 GLIS3Q8NEA6 775 aa7.56□□□□□ -1.2
USP47-206ENST00000525367 IGFLR1Q9H665 355 aa7.56□□□□□ -1.2
USP47-206ENST00000525367 TLR7Q9NYK1 1049 aaKnown RBP7.56□□□□□ -1.2
USP47-206ENST00000525367 USP17L7P0C7H9 530 aa7.55□□□□□ -1.2
USP47-206ENST00000525367 FANCCQ00597 558 aa7.55□□□□□ -1.2
USP47-206ENST00000525367 TBC1D8BQ0IIM8 1120 aa7.55□□□□□ -1.2
USP47-206ENST00000525367 SV2AQ7L0J3 742 aa7.55□□□□□ -1.2
USP47-206ENST00000525367 CRELD1Q96HD1 420 aa7.55□□□□□ -1.2
USP47-206ENST00000525367 GMCL1Q96IK5 515 aa7.55□□□□□ -1.2
USP47-206ENST00000525367 ZKSCAN3Q9BRR0 538 aa7.55□□□□□ -1.2
USP47-206ENST00000525367 SUV39H2Q9H5I1 410 aa7.55□□□□□ -1.2
USP47-206ENST00000525367 J3QW42 95 aa7.54□□□□□ -1.2
USP47-206ENST00000525367 SCAMP3O14828 347 aaKnown RBP7.54□□□□□ -1.2
USP47-206ENST00000525367 ARHGEF15O94989 841 aa7.54□□□□□ -1.2
USP47-206ENST00000525367 KIF4AO95239 1232 aa7.54□□□□□ -1.2
USP47-206ENST00000525367 PSAPP07602 524 aa7.54□□□□□ -1.2
USP47-206ENST00000525367 HSP90B1P14625 803 aaKnown RBP7.54□□□□□ -1.2
USP47-206ENST00000525367 PCBP4P57723 403 aaKnown RBP7.54□□□□□ -1.2
USP47-206ENST00000525367 FAM182BQ5T319 152 aa7.54□□□□□ -1.2
USP47-206ENST00000525367 SYT9Q86SS6 491 aa7.54□□□□□ -1.2
USP47-206ENST00000525367 METTL16Q86W50 562 aaKnown RBP7.54□□□□□ -1.2
USP47-206ENST00000525367 NCAPG2Q86XI2 1143 aa7.54□□□□□ -1.2
USP47-206ENST00000525367 NANOS1Q8WY41 292 aaKnown RBP7.54□□□□□ -1.2
USP47-206ENST00000525367 TRERF1Q96PN7 1200 aa7.54□□□□□ -1.2
USP47-206ENST00000525367 BCL11AQ9H165 835 aa7.54□□□□□ -1.2
USP47-206ENST00000525367 EHD4Q9H223 541 aa7.54□□□□□ -1.2
USP47-206ENST00000525367 METTL12A8MUP2 240 aa7.53□□□□□ -1.2
USP47-206ENST00000525367 MAP3K6O95382 1288 aa7.53□□□□□ -1.2
USP47-206ENST00000525367 SLURP2P0DP57 97 aa7.53□□□□□ -1.2
USP47-206ENST00000525367 ATP11AP98196 1134 aa7.53□□□□□ -1.2
USP47-206ENST00000525367 PLAURQ03405 335 aa7.53□□□□□ -1.2
USP47-206ENST00000525367 RAD51AP2Q09MP3 1159 aa7.53□□□□□ -1.2
USP47-206ENST00000525367 PMEPA1Q969W9 287 aa7.53□□□□□ -1.2
USP47-206ENST00000525367 COL25A1Q9BXS0 654 aaPredicted RBP7.53□□□□□ -1.2
USP47-206ENST00000525367 KLF15Q9UIH9 416 aa7.53□□□□□ -1.2
USP47-206ENST00000525367 PRR12Q9ULL5 1215 aa7.53□□□□□ -1.2
USP47-206ENST00000525367 PHF24Q9UPV7 400 aa7.53□□□□□ -1.2
USP47-206ENST00000525367 BMP4P12644 408 aa7.52□□□□□ -1.21
USP47-206ENST00000525367 EDN3P14138 238 aa7.52□□□□□ -1.21
USP47-206ENST00000525367 SOX18P35713 384 aa7.52□□□□□ -1.21
USP47-206ENST00000525367 FCGRTP55899 365 aa7.52□□□□□ -1.21
USP47-206ENST00000525367 HYAL2Q12891 473 aa7.52□□□□□ -1.21
USP47-206ENST00000525367 RNFT1Q5M7Z0 435 aa7.52□□□□□ -1.21
USP47-206ENST00000525367 KIAA0319Q5VV43 1072 aa7.52□□□□□ -1.21
USP47-206ENST00000525367 KANK3Q6NY19 840 aa7.52□□□□□ -1.21
USP47-206ENST00000525367 ADAMTSL4Q6UY14 1074 aa7.52□□□□□ -1.21
USP47-206ENST00000525367 CEP120Q8N960 986 aa7.52□□□□□ -1.21
USP47-206ENST00000525367 FRMD6Q96NE9 622 aa7.52□□□□□ -1.21
USP47-206ENST00000525367 TCF12Q99081 682 aa7.52□□□□□ -1.21
USP47-206ENST00000525367 OSMRQ99650 979 aa7.52□□□□□ -1.21
USP47-206ENST00000525367 UBE2OQ9C0C9 1292 aaKnown RBP7.52□□□□□ -1.21
USP47-206ENST00000525367 ABCB6Q9NP58 842 aa7.52□□□□□ -1.21
USP47-206ENST00000525367 DNAJB12Q9NXW2 375 aaKnown RBP7.52□□□□□ -1.21
USP47-206ENST00000525367 ERCC5P28715 1186 aaPredicted RBP7.51□□□□□ -1.21
USP47-206ENST00000525367 ZNF468Q5VIY5 522 aaPredicted RBP7.51□□□□□ -1.21
USP47-206ENST00000525367 FOXR1Q6PIV2 292 aa7.51□□□□□ -1.21
USP47-206ENST00000525367 NT5DC4Q86YG4 428 aa7.51□□□□□ -1.21
USP47-206ENST00000525367 C3orf58Q8NDZ4 430 aa7.51□□□□□ -1.21
USP47-206ENST00000525367 WHAMMQ8TF30 809 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms