RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 PTPN12Q05209 780 aaKnown RBP5.75□□□□□ -1.49
CHMP4A-202ENST00000524955 CHRNDQ07001 517 aa5.75□□□□□ -1.49
CHMP4A-202ENST00000524955 PDE3AQ14432 1141 aa5.75□□□□□ -1.49
CHMP4A-202ENST00000524955 RABL6Q3YEC7 729 aaPredicted RBP5.75□□□□□ -1.49
CHMP4A-202ENST00000524955 TXNRD3Q86VQ6 643 aa5.75□□□□□ -1.49
CHMP4A-202ENST00000524955 SP8Q8IXZ3 490 aa5.75□□□□□ -1.49
CHMP4A-202ENST00000524955 TMX4Q9H1E5 349 aaPredicted RBP5.75□□□□□ -1.49
CHMP4A-202ENST00000524955 TAOK3Q9H2K8 898 aa5.75□□□□□ -1.49
CHMP4A-202ENST00000524955 ZBTB40Q9NUA8 1239 aa5.75□□□□□ -1.49
CHMP4A-202ENST00000524955 BSDC1Q9NW68 430 aaPredicted RBP5.75□□□□□ -1.49
CHMP4A-202ENST00000524955 PPIP5K2O43314 1243 aa5.74□□□□□ -1.49
CHMP4A-202ENST00000524955 MS4A1P11836 297 aa5.74□□□□□ -1.49
CHMP4A-202ENST00000524955 YY1P25490 414 aa5.74□□□□□ -1.49
CHMP4A-202ENST00000524955 ATP8B2P98198 1209 aa5.74□□□□□ -1.49
CHMP4A-202ENST00000524955 METTL24Q5JXM2 366 aa5.74□□□□□ -1.49
CHMP4A-202ENST00000524955 CEP85Q6P2H3 762 aa5.74□□□□□ -1.49
CHMP4A-202ENST00000524955 ATG9AQ7Z3C6 839 aa5.74□□□□□ -1.49
CHMP4A-202ENST00000524955 SIRT2Q8IXJ6 389 aa5.74□□□□□ -1.49
CHMP4A-202ENST00000524955 RTKN2Q8IZC4 609 aa5.74□□□□□ -1.49
CHMP4A-202ENST00000524955 LARGE2Q8N3Y3 721 aa5.74□□□□□ -1.49
CHMP4A-202ENST00000524955 TBC1D16Q8TBP0 767 aa5.74□□□□□ -1.49
CHMP4A-202ENST00000524955 DBNDD1Q9H9R9 158 aa5.74□□□□□ -1.49
CHMP4A-202ENST00000524955 KCNQ5Q9NR82 932 aa5.74□□□□□ -1.49
CHMP4A-202ENST00000524955 GGA1Q9UJY5 639 aa5.74□□□□□ -1.49
CHMP4A-202ENST00000524955 DDX19BQ9UMR2 479 aa5.74□□□□□ -1.49
CHMP4A-202ENST00000524955 IQSEC3Q9UPP2 1182 aaPredicted RBP5.74□□□□□ -1.49
CHMP4A-202ENST00000524955 JAG2Q9Y219 1238 aa5.74□□□□□ -1.49
CHMP4A-202ENST00000524955 RIPOR2Q9Y4F9 1068 aa5.74□□□□□ -1.49
CHMP4A-202ENST00000524955 PCDHB15Q9Y5E8 787 aa5.74□□□□□ -1.49
CHMP4A-202ENST00000524955 COL4A5P29400 1685 aa5.74□□□□□ -1.49
CHMP4A-202ENST00000524955 CACNA1SQ13698 1873 aa5.74□□□□□ -1.49
CHMP4A-202ENST00000524955 SNED1Q8TER0 1413 aa5.74□□□□□ -1.49
CHMP4A-202ENST00000524955 ZNF541Q9H0D2 1346 aa5.74□□□□□ -1.49
CHMP4A-202ENST00000524955 DLEC1Q9Y238 1755 aa5.73□□□□□ -1.49
CHMP4A-202ENST00000524955 RTL9Q8NET4 1388 aa5.73□□□□□ -1.49
CHMP4A-202ENST00000524955 G3V3G9 751 aa5.73□□□□□ -1.49
CHMP4A-202ENST00000524955 EYA2O00167 538 aa5.73□□□□□ -1.49
CHMP4A-202ENST00000524955 SURF6O75683 361 aaKnown RBP5.73□□□□□ -1.49
CHMP4A-202ENST00000524955 RAD17O75943 681 aa5.73□□□□□ -1.49
CHMP4A-202ENST00000524955 DDNO94850 711 aaPredicted RBP5.73□□□□□ -1.49
CHMP4A-202ENST00000524955 LMNB1P20700 586 aa5.73□□□□□ -1.49
CHMP4A-202ENST00000524955 IARSP41252 1262 aaKnown RBP5.73□□□□□ -1.49
CHMP4A-202ENST00000524955 GYG1P46976 350 aa5.73□□□□□ -1.49
CHMP4A-202ENST00000524955 KCNJ4P48050 445 aa5.73□□□□□ -1.49
CHMP4A-202ENST00000524955 TFCP2Q12800 502 aa5.73□□□□□ -1.49
CHMP4A-202ENST00000524955 OS9Q13438 667 aaPredicted RBP5.73□□□□□ -1.49
CHMP4A-202ENST00000524955 WASHC4Q2M389 1173 aa5.73□□□□□ -1.49
CHMP4A-202ENST00000524955 DCAF8Q5TAQ9 597 aa5.73□□□□□ -1.49
CHMP4A-202ENST00000524955 FBXW7Q969H0 707 aa5.73□□□□□ -1.49
CHMP4A-202ENST00000524955 MXD3Q9BW11 206 aa5.73□□□□□ -1.49
CHMP4A-202ENST00000524955 EXOC6BQ9Y2D4 811 aa5.73□□□□□ -1.49
CHMP4A-202ENST00000524955 GJA3Q9Y6H8 435 aa5.73□□□□□ -1.49
CHMP4A-202ENST00000524955 ZNF804BA4D1E1 1349 aa5.73□□□□□ -1.49
CHMP4A-202ENST00000524955 XDHP47989 1333 aa5.73□□□□□ -1.49
CHMP4A-202ENST00000524955 DUOX1Q9NRD9 1551 aa5.72□□□□□ -1.49
CHMP4A-202ENST00000524955 GOLGB1Q14789 3259 aaKnown RBP5.72□□□□□ -1.49
CHMP4A-202ENST00000524955 YDJCA8MPS7 323 aa5.72□□□□□ -1.49
CHMP4A-202ENST00000524955 SMARCA5O60264 1052 aaPredicted RBP5.72□□□□□ -1.49
CHMP4A-202ENST00000524955 ECE2O60344 883 aa5.72□□□□□ -1.49
CHMP4A-202ENST00000524955 SASH1O94885 1247 aa5.72□□□□□ -1.49
CHMP4A-202ENST00000524955 ATP2B4P23634 1241 aa5.72□□□□□ -1.49
CHMP4A-202ENST00000524955 ADORA1P30542 326 aa5.72□□□□□ -1.49
CHMP4A-202ENST00000524955 TIMM10P62072 90 aa5.72□□□□□ -1.49
CHMP4A-202ENST00000524955 POLA2Q14181 598 aa5.72□□□□□ -1.49
CHMP4A-202ENST00000524955 SOGA3Q5TF21 947 aa5.72□□□□□ -1.49
CHMP4A-202ENST00000524955 CC2D2BQ6DHV5 1058 aa5.72□□□□□ -1.49
CHMP4A-202ENST00000524955 NIM1KQ8IY84 436 aa5.72□□□□□ -1.49
CHMP4A-202ENST00000524955 PSMD1Q99460 953 aa5.72□□□□□ -1.49
CHMP4A-202ENST00000524955 RTFDC1Q9BY42 306 aaPredicted RBP5.72□□□□□ -1.49
CHMP4A-202ENST00000524955 ZC3H12CQ9C0D7 883 aaKnown RBP5.72□□□□□ -1.49
CHMP4A-202ENST00000524955 IL1RAPL2Q9NP60 686 aa5.72□□□□□ -1.49
CHMP4A-202ENST00000524955 ZBTB12Q9Y330 459 aaPredicted RBP5.72□□□□□ -1.49
CHMP4A-202ENST00000524955 BRCA1P38398 1863 aaKnown RBP5.72□□□□□ -1.49
CHMP4A-202ENST00000524955 SPEF2Q9C093 1822 aa5.71□□□□□ -1.49
CHMP4A-202ENST00000524955 SHTN1A0MZ66 631 aa5.71□□□□□ -1.5
CHMP4A-202ENST00000524955 BCAMP50895 628 aa5.71□□□□□ -1.5
CHMP4A-202ENST00000524955 KIAA2012Q0VF49 1180 aa5.71□□□□□ -1.5
CHMP4A-202ENST00000524955 G3BP1Q13283 466 aaKnown RBP eCLIP5.71□□□□□ -1.5
CHMP4A-202ENST00000524955 MTX1Q13505 466 aa5.71□□□□□ -1.5
CHMP4A-202ENST00000524955 TMC4Q7Z404 712 aa5.71□□□□□ -1.5
CHMP4A-202ENST00000524955 VGLL2Q8N8G2 317 aa5.71□□□□□ -1.5
CHMP4A-202ENST00000524955 SUPT20HQ8NEM7 779 aa5.71□□□□□ -1.5
CHMP4A-202ENST00000524955 SSH3Q8TE77 659 aa5.71□□□□□ -1.5
CHMP4A-202ENST00000524955 JDP2Q8WYK2 163 aa5.71□□□□□ -1.5
CHMP4A-202ENST00000524955 NEUROD6Q96NK8 337 aa5.71□□□□□ -1.5
CHMP4A-202ENST00000524955 EYA3Q99504 573 aa5.71□□□□□ -1.5
CHMP4A-202ENST00000524955 ANKRD2Q9GZV1 360 aa5.71□□□□□ -1.5
CHMP4A-202ENST00000524955 NMRK2Q9NPI5 230 aa5.71□□□□□ -1.5
CHMP4A-202ENST00000524955 COPRSQ9NQ92 184 aa5.71□□□□□ -1.5
CHMP4A-202ENST00000524955 TLR7Q9NYK1 1049 aaKnown RBP5.71□□□□□ -1.5
CHMP4A-202ENST00000524955 PODXL2Q9NZ53 605 aa5.71□□□□□ -1.5
CHMP4A-202ENST00000524955 CEP126Q9P2H0 1117 aa5.71□□□□□ -1.5
CHMP4A-202ENST00000524955 HDAC5Q9UQL6 1122 aa5.71□□□□□ -1.5
CHMP4A-202ENST00000524955 MROH5Q6ZUA9 1318 aa5.71□□□□□ -1.5
CHMP4A-202ENST00000524955 LTBP3Q9NS15 1303 aa5.71□□□□□ -1.5
CHMP4A-202ENST00000524955 CACNA1FO60840 1977 aa5.7□□□□□ -1.5
CHMP4A-202ENST00000524955 A0A1B0GUL7 405 aa5.7□□□□□ -1.5
CHMP4A-202ENST00000524955 PSMD14O00487 310 aa5.7□□□□□ -1.5
CHMP4A-202ENST00000524955 PDE8BO95263 885 aa5.7□□□□□ -1.5
CHMP4A-202ENST00000524955 IGHDP01880 384 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms