RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 ATP9BO43861 1147 aa10.62□□□□□ -0.71
NEDD8-203ENST00000524927 MCCD1P59942 119 aaPredicted RBP10.62□□□□□ -0.71
NEDD8-203ENST00000524927 ADAM32Q8TC27 787 aa10.62□□□□□ -0.71
NEDD8-203ENST00000524927 ANKRD30BQ9BXX2 1392 aa10.62□□□□□ -0.71
NEDD8-203ENST00000524927 PXDNLA1KZ92 1463 aa10.61□□□□□ -0.71
NEDD8-203ENST00000524927 MAGEB6P1A0A0J9YX57 407 aa10.61□□□□□ -0.71
NEDD8-203ENST00000524927 ZC3H6P61129 1189 aaKnown RBP10.61□□□□□ -0.71
NEDD8-203ENST00000524927 CDCA8Q53HL2 280 aa10.61□□□□□ -0.71
NEDD8-203ENST00000524927 OCSTAMPQ9BR26 566 aa10.61□□□□□ -0.71
NEDD8-203ENST00000524927 CARD14Q9BXL6 1004 aa10.61□□□□□ -0.71
NEDD8-203ENST00000524927 MAFBQ9Y5Q3 323 aaPredicted RBP10.61□□□□□ -0.71
NEDD8-203ENST00000524927 CRB1P82279 1406 aa10.6□□□□□ -0.71
NEDD8-203ENST00000524927 PIK3CDO00329 1044 aa10.6□□□□□ -0.71
NEDD8-203ENST00000524927 PPFIA3O75145 1194 aa10.6□□□□□ -0.71
NEDD8-203ENST00000524927 SKIP12755 728 aa10.6□□□□□ -0.71
NEDD8-203ENST00000524927 SLFNL1Q499Z3 407 aa10.6□□□□□ -0.71
NEDD8-203ENST00000524927 ABCC11Q96J66 1382 aa10.6□□□□□ -0.71
NEDD8-203ENST00000524927 PLEKHH1Q9ULM0 1364 aa10.6□□□□□ -0.71
NEDD8-203ENST00000524927 IGSF1Q8N6C5 1336 aa10.59□□□□□ -0.71
NEDD8-203ENST00000524927 KDM2BQ8NHM5 1336 aa10.59□□□□□ -0.71
NEDD8-203ENST00000524927 IFT172Q9UG01 1749 aa10.59□□□□□ -0.71
NEDD8-203ENST00000524927 LBX1P52954 281 aa10.59□□□□□ -0.71
NEDD8-203ENST00000524927 SH3BP5LQ7L8J4 393 aa10.59□□□□□ -0.71
NEDD8-203ENST00000524927 DZIP3Q86Y13 1208 aaKnown RBP10.59□□□□□ -0.71
NEDD8-203ENST00000524927 CDCA7Q9BWT1 371 aaPredicted RBP10.59□□□□□ -0.71
NEDD8-203ENST00000524927 LRRC4BQ9NT99 713 aa10.59□□□□□ -0.71
NEDD8-203ENST00000524927 TFCP2L1Q9NZI6 479 aa10.59□□□□□ -0.71
NEDD8-203ENST00000524927 CEP126Q9P2H0 1117 aa10.59□□□□□ -0.71
NEDD8-203ENST00000524927 DNMT3LQ9UJW3 386 aa10.59□□□□□ -0.71
NEDD8-203ENST00000524927 ANKARQ7Z5J8 1434 aa10.58□□□□□ -0.72
NEDD8-203ENST00000524927 PLEKHG2Q9H7P9 1386 aa10.58□□□□□ -0.72
NEDD8-203ENST00000524927 GSK3AP49840 483 aa10.58□□□□□ -0.72
NEDD8-203ENST00000524927 PDE4CQ08493 712 aa10.58□□□□□ -0.72
NEDD8-203ENST00000524927 TRIM26Q12899 539 aaPredicted RBP10.58□□□□□ -0.72
NEDD8-203ENST00000524927 NR5A1Q13285 461 aa10.58□□□□□ -0.72
NEDD8-203ENST00000524927 BPHLQ86WA6 291 aaPredicted RBP10.58□□□□□ -0.72
NEDD8-203ENST00000524927 GPR161Q8N6U8 529 aaKnown RBP10.58□□□□□ -0.72
NEDD8-203ENST00000524927 TRAIPQ9BWF2 469 aa10.58□□□□□ -0.72
NEDD8-203ENST00000524927 STK26Q9P289 416 aa10.58□□□□□ -0.72
NEDD8-203ENST00000524927 AKAP12Q02952 1782 aa10.57□□□□□ -0.72
NEDD8-203ENST00000524927 LMO7Q8WWI1 1683 aa10.57□□□□□ -0.72
NEDD8-203ENST00000524927 CPDO75976 1380 aa10.57□□□□□ -0.72
NEDD8-203ENST00000524927 MAN1A2O60476 641 aa10.57□□□□□ -0.72
NEDD8-203ENST00000524927 CSB-PGBD3P0DP91 1061 aa10.57□□□□□ -0.72
NEDD8-203ENST00000524927 SRPK2P78362 688 aaKnown RBP10.57□□□□□ -0.72
NEDD8-203ENST00000524927 KRT76Q01546 638 aa10.57□□□□□ -0.72
NEDD8-203ENST00000524927 SLC27A3Q5K4L6 730 aa10.57□□□□□ -0.72
NEDD8-203ENST00000524927 SH3RF1Q7Z6J0 888 aa10.57□□□□□ -0.72
NEDD8-203ENST00000524927 NFATC2IPQ8NCF5 419 aa10.57□□□□□ -0.72
NEDD8-203ENST00000524927 C1QTNF2Q9BXJ5 285 aa10.57□□□□□ -0.72
NEDD8-203ENST00000524927 BMP2P12643 396 aa10.56□□□□□ -0.72
NEDD8-203ENST00000524927 RNF135Q8IUD6 432 aa10.56□□□□□ -0.72
NEDD8-203ENST00000524927 LINC00528Q8N1L1 170 aa10.56□□□□□ -0.72
NEDD8-203ENST00000524927 MEIOBQ8N635 442 aa10.56□□□□□ -0.72
NEDD8-203ENST00000524927 SIRT1Q96EB6 747 aa10.56□□□□□ -0.72
NEDD8-203ENST00000524927 VRTNQ9H8Y1 702 aa10.56□□□□□ -0.72
NEDD8-203ENST00000524927 NHSQ6T4R5 1651 aa10.56□□□□□ -0.72
NEDD8-203ENST00000524927 RPGRIP1LQ68CZ1 1315 aa10.56□□□□□ -0.72
NEDD8-203ENST00000524927 KNDC1Q76NI1 1749 aa10.55□□□□□ -0.72
NEDD8-203ENST00000524927 COL5A2P05997 1499 aaPredicted RBP10.55□□□□□ -0.72
NEDD8-203ENST00000524927 HIRIP3Q9BW71 556 aaPredicted RBP10.55□□□□□ -0.72
NEDD8-203ENST00000524927 RRAGCQ9HB90 399 aa10.55□□□□□ -0.72
NEDD8-203ENST00000524927 ZBTB7CA1YPR0 619 aa10.54□□□□□ -0.72
NEDD8-203ENST00000524927 DEPDC4Q8N2C3 294 aa10.54□□□□□ -0.72
NEDD8-203ENST00000524927 MKRN1Q9UHC7 482 aaKnown RBP10.54□□□□□ -0.72
NEDD8-203ENST00000524927 USP17L3A6NCW0 530 aa10.53□□□□□ -0.72
NEDD8-203ENST00000524927 USP17L4A6NCW7 530 aa10.53□□□□□ -0.72
NEDD8-203ENST00000524927 USP17L5A8MUK1 530 aa10.53□□□□□ -0.72
NEDD8-203ENST00000524927 USP17L2Q6R6M4 530 aa10.53□□□□□ -0.72
NEDD8-203ENST00000524927 USP17L1Q7RTZ2 530 aa10.53□□□□□ -0.72
NEDD8-203ENST00000524927 PODXL2Q9NZ53 605 aa10.53□□□□□ -0.72
NEDD8-203ENST00000524927 TNRC6CQ9HCJ0 1690 aaKnown RBP10.53□□□□□ -0.72
NEDD8-203ENST00000524927 KCPQ6ZWJ8 1503 aa10.53□□□□□ -0.72
NEDD8-203ENST00000524927 TUBGCP6Q96RT7 1819 aa10.52□□□□□ -0.73
NEDD8-203ENST00000524927 DLL1O00548 723 aa10.52□□□□□ -0.73
NEDD8-203ENST00000524927 HSPA8P11142 646 aaKnown RBP10.52□□□□□ -0.73
NEDD8-203ENST00000524927 FSHRP23945 695 aa10.52□□□□□ -0.73
NEDD8-203ENST00000524927 ERFEQ4G0M1 354 aa10.52□□□□□ -0.73
NEDD8-203ENST00000524927 AEBP1Q8IUX7 1158 aa10.52□□□□□ -0.73
NEDD8-203ENST00000524927 GCC1Q96CN9 775 aa10.52□□□□□ -0.73
NEDD8-203ENST00000524927 SLC10A4Q96EP9 437 aa10.52□□□□□ -0.73
NEDD8-203ENST00000524927 TRPM1Q7Z4N2 1603 aa10.51□□□□□ -0.73
NEDD8-203ENST00000524927 PHTF2Q8N3S3 785 aa10.51□□□□□ -0.73
NEDD8-203ENST00000524927 PLPP7Q8NBV4 271 aa10.51□□□□□ -0.73
NEDD8-203ENST00000524927 CNTNAP1P78357 1384 aa10.51□□□□□ -0.73
NEDD8-203ENST00000524927 USP6P35125 1406 aa10.5□□□□□ -0.73
NEDD8-203ENST00000524927 EXOC5O00471 708 aa10.5□□□□□ -0.73
NEDD8-203ENST00000524927 ATG7O95352 703 aa10.5□□□□□ -0.73
NEDD8-203ENST00000524927 CBLBQ13191 982 aa10.5□□□□□ -0.73
NEDD8-203ENST00000524927 KANK4Q5T7N3 995 aaPredicted RBP10.5□□□□□ -0.73
NEDD8-203ENST00000524927 MSL1Q68DK7 614 aa10.5□□□□□ -0.73
NEDD8-203ENST00000524927 COL23A1Q86Y22 540 aaPredicted RBP10.5□□□□□ -0.73
NEDD8-203ENST00000524927 PLEKHM2Q8IWE5 1019 aa10.5□□□□□ -0.73
NEDD8-203ENST00000524927 KCTD17Q8N5Z5 321 aa10.5□□□□□ -0.73
NEDD8-203ENST00000524927 NUP155O75694 1391 aa10.5□□□□□ -0.73
NEDD8-203ENST00000524927 KIF1BO60333 1816 aa10.49□□□□□ -0.73
NEDD8-203ENST00000524927 WNK3Q9BYP7 1800 aa10.49□□□□□ -0.73
NEDD8-203ENST00000524927 FIGNL2A6NMB9 653 aa10.49□□□□□ -0.73
NEDD8-203ENST00000524927 NCOA4Q13772 614 aa10.49□□□□□ -0.73
NEDD8-203ENST00000524927 MAP7D1Q3KQU3 841 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms