RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 TSPYL6Q8N831 410 aa8.39□□□□□ -1.07
NUP98-213ENST00000524563 EYA3Q99504 573 aa8.39□□□□□ -1.07
NUP98-213ENST00000524563 COL4A1P02462 1669 aa8.39□□□□□ -1.07
NUP98-213ENST00000524563 ATP5J2-PTCD1G3V325 749 aa8.38□□□□□ -1.07
NUP98-213ENST00000524563 CA12O43570 354 aa8.38□□□□□ -1.07
NUP98-213ENST00000524563 ECE2O60344 883 aa8.38□□□□□ -1.07
NUP98-213ENST00000524563 HUNKP57058 714 aa8.38□□□□□ -1.07
NUP98-213ENST00000524563 NSFL1CQ9UNZ2 370 aaKnown RBP8.38□□□□□ -1.07
NUP98-213ENST00000524563 ZNF646O15015 1829 aaPredicted RBP8.38□□□□□ -1.07
NUP98-213ENST00000524563 PSMD14O00487 310 aa8.37□□□□□ -1.07
NUP98-213ENST00000524563 UFL1O94874 794 aa8.37□□□□□ -1.07
NUP98-213ENST00000524563 HSP90B1P14625 803 aaKnown RBP8.37□□□□□ -1.07
NUP98-213ENST00000524563 HNRNPUQ00839 825 aaKnown RBP eCLIP8.37□□□□□ -1.07
NUP98-213ENST00000524563 EXOSC9Q06265 439 aaKnown RBP8.37□□□□□ -1.07
NUP98-213ENST00000524563 NOGQ13253 232 aa8.37□□□□□ -1.07
NUP98-213ENST00000524563 WASHC4Q2M389 1173 aa8.37□□□□□ -1.07
NUP98-213ENST00000524563 KIF4BQ2VIQ3 1234 aa8.37□□□□□ -1.07
NUP98-213ENST00000524563 TWISTNBQ3B726 338 aaPredicted RBP8.37□□□□□ -1.07
NUP98-213ENST00000524563 TBC1D10BQ4KMP7 808 aaPredicted RBP8.37□□□□□ -1.07
NUP98-213ENST00000524563 RBM26Q5T8P6 1007 aaKnown RBP8.37□□□□□ -1.07
NUP98-213ENST00000524563 CDC37L1Q7L3B6 337 aa8.37□□□□□ -1.07
NUP98-213ENST00000524563 KRT26Q7Z3Y9 468 aa8.37□□□□□ -1.07
NUP98-213ENST00000524563 RIC3Q7Z5B4 369 aa8.37□□□□□ -1.07
NUP98-213ENST00000524563 PLBD2Q8NHP8 589 aa8.37□□□□□ -1.07
NUP98-213ENST00000524563 FBXW7Q969H0 707 aa8.37□□□□□ -1.07
NUP98-213ENST00000524563 DCPSQ96C86 337 aaKnown RBP8.37□□□□□ -1.07
NUP98-213ENST00000524563 RTFDC1Q9BY42 306 aaPredicted RBP8.37□□□□□ -1.07
NUP98-213ENST00000524563 ANKIB1Q9P2G1 1089 aa8.37□□□□□ -1.07
NUP98-213ENST00000524563 DBF4Q9UBU7 674 aaPredicted RBP8.37□□□□□ -1.07
NUP98-213ENST00000524563 CNOT7Q9UIV1 285 aaKnown RBP8.37□□□□□ -1.07
NUP98-213ENST00000524563 SHTN1A0MZ66 631 aa8.36□□□□□ -1.07
NUP98-213ENST00000524563 IRS4O14654 1257 aaPredicted RBP8.36□□□□□ -1.07
NUP98-213ENST00000524563 RPS12P25398 132 aaKnown RBP8.36□□□□□ -1.07
NUP98-213ENST00000524563 MAP2K2P36507 400 aa8.36□□□□□ -1.07
NUP98-213ENST00000524563 BRPF1P55201 1214 aaPredicted RBP8.36□□□□□ -1.07
NUP98-213ENST00000524563 DGKZQ13574 1117 aa8.36□□□□□ -1.07
NUP98-213ENST00000524563 DOK7Q18PE1 504 aa8.36□□□□□ -1.07
NUP98-213ENST00000524563 SLC10A5Q5PT55 438 aa8.36□□□□□ -1.07
NUP98-213ENST00000524563 CST9Q5W186 159 aa8.36□□□□□ -1.07
NUP98-213ENST00000524563 SAPCD2Q86UD0 394 aa8.36□□□□□ -1.07
NUP98-213ENST00000524563 USP48Q86UV5 1035 aa8.36□□□□□ -1.07
NUP98-213ENST00000524563 SULF1Q8IWU6 871 aa8.36□□□□□ -1.07
NUP98-213ENST00000524563 C2orf69Q8N8R5 385 aa8.36□□□□□ -1.07
NUP98-213ENST00000524563 ZC3H15Q8WU90 426 aaKnown RBP8.36□□□□□ -1.07
NUP98-213ENST00000524563 FAM89AQ96GI7 184 aa8.36□□□□□ -1.07
NUP98-213ENST00000524563 PHAXQ9H814 394 aaKnown RBP8.36□□□□□ -1.07
NUP98-213ENST00000524563 GBA2Q9HCG7 927 aaPredicted RBP8.36□□□□□ -1.07
NUP98-213ENST00000524563 HYPKQ9NX55 129 aa8.36□□□□□ -1.07
NUP98-213ENST00000524563 GGA3Q9NZ52 723 aa8.36□□□□□ -1.07
NUP98-213ENST00000524563 ZBTB12Q9Y330 459 aaPredicted RBP8.36□□□□□ -1.07
NUP98-213ENST00000524563 ARAP2Q8WZ64 1704 aa8.36□□□□□ -1.07
NUP98-213ENST00000524563 AK9Q5TCS8 1911 aa8.35□□□□□ -1.07
NUP98-213ENST00000524563 YDJCA8MPS7 323 aa8.35□□□□□ -1.07
NUP98-213ENST00000524563 ADM5C9JUS6 153 aa8.35□□□□□ -1.07
NUP98-213ENST00000524563 GPSM2P81274 684 aa8.35□□□□□ -1.07
NUP98-213ENST00000524563 MLLT1Q03111 559 aaPredicted RBP8.35□□□□□ -1.07
NUP98-213ENST00000524563 CCDC152Q4G0S7 254 aa8.35□□□□□ -1.07
NUP98-213ENST00000524563 ANKRD13DQ6ZTN6 518 aa8.35□□□□□ -1.07
NUP98-213ENST00000524563 SAMD7Q7Z3H4 446 aa8.35□□□□□ -1.07
NUP98-213ENST00000524563 CELF1Q92879 486 aaKnown RBP8.35□□□□□ -1.07
NUP98-213ENST00000524563 CDCA7LQ96GN5 454 aa8.35□□□□□ -1.07
NUP98-213ENST00000524563 HHIPL1Q96JK4 782 aa8.35□□□□□ -1.07
NUP98-213ENST00000524563 CCDC85AQ96PX6 553 aaPredicted RBP8.35□□□□□ -1.07
NUP98-213ENST00000524563 MYD88Q99836 296 aa8.35□□□□□ -1.07
NUP98-213ENST00000524563 MYH16Q9H6N6 1097 aa8.35□□□□□ -1.07
NUP98-213ENST00000524563 GGA1Q9UJY5 639 aa8.35□□□□□ -1.07
NUP98-213ENST00000524563 OTOFQ9HC10 1997 aa8.34□□□□□ -1.07
NUP98-213ENST00000524563 E9PSI1 815 aa8.34□□□□□ -1.07
NUP98-213ENST00000524563 VAMP4O75379 141 aa8.34□□□□□ -1.07
NUP98-213ENST00000524563 DDX58O95786 925 aaKnown RBP8.34□□□□□ -1.07
NUP98-213ENST00000524563 NEFLP07196 543 aa8.34□□□□□ -1.07
NUP98-213ENST00000524563 ZNF157P51786 506 aaPredicted RBP8.34□□□□□ -1.07
NUP98-213ENST00000524563 SLFN5Q08AF3 891 aa8.34□□□□□ -1.07
NUP98-213ENST00000524563 TTLL12Q14166 644 aaPredicted RBP8.34□□□□□ -1.07
NUP98-213ENST00000524563 CCDC30Q5VVM6 783 aa8.34□□□□□ -1.07
NUP98-213ENST00000524563 ZC3H12CQ9C0D7 883 aaKnown RBP8.34□□□□□ -1.07
NUP98-213ENST00000524563 MCOLN1Q9GZU1 580 aa8.34□□□□□ -1.07
NUP98-213ENST00000524563 NPM3O75607 178 aaKnown RBP8.33□□□□□ -1.08
NUP98-213ENST00000524563 RGMBQ6NW40 437 aa8.33□□□□□ -1.08
NUP98-213ENST00000524563 G2E3Q7L622 706 aa8.33□□□□□ -1.08
NUP98-213ENST00000524563 ANKRD18AQ8IVF6 992 aa8.33□□□□□ -1.08
NUP98-213ENST00000524563 TRMT2AQ8IZ69 625 aaKnown RBP8.33□□□□□ -1.08
NUP98-213ENST00000524563 DPF2Q92785 391 aa8.33□□□□□ -1.08
NUP98-213ENST00000524563 ISCA1Q9BUE6 129 aa8.33□□□□□ -1.08
NUP98-213ENST00000524563 CWC25Q9NXE8 425 aaPredicted RBP8.33□□□□□ -1.08
NUP98-213ENST00000524563 RTL9Q8NET4 1388 aa8.33□□□□□ -1.08
NUP98-213ENST00000524563 XDHP47989 1333 aa8.32□□□□□ -1.08
NUP98-213ENST00000524563 HIRAP54198 1017 aaPredicted RBP8.32□□□□□ -1.08
NUP98-213ENST00000524563 RPS8P62241 208 aaKnown RBP8.32□□□□□ -1.08
NUP98-213ENST00000524563 NEXNQ0ZGT2 675 aa8.32□□□□□ -1.08
NUP98-213ENST00000524563 SF3B3Q15393 1217 aaKnown RBP8.32□□□□□ -1.08
NUP98-213ENST00000524563 ZBTB38Q8NAP3 1195 aaPredicted RBP8.32□□□□□ -1.08
NUP98-213ENST00000524563 TBC1D16Q8TBP0 767 aa8.32□□□□□ -1.08
NUP98-213ENST00000524563 CDC5LQ99459 802 aaKnown RBP8.32□□□□□ -1.08
NUP98-213ENST00000524563 STK31Q9BXU1 1019 aa8.32□□□□□ -1.08
NUP98-213ENST00000524563 POLLQ9UGP5 575 aa8.32□□□□□ -1.08
NUP98-213ENST00000524563 LAMB1P07942 1786 aa8.31□□□□□ -1.08
NUP98-213ENST00000524563 PDE8AO60658 829 aa8.31□□□□□ -1.08
NUP98-213ENST00000524563 SLC4A2P04920 1241 aa8.31□□□□□ -1.08
NUP98-213ENST00000524563 NF2P35240 595 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms