RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 EGFRP00533 1210 aa10.38□□□□□ -0.75
NSMCE2-213ENST00000523824 GPSM2P81274 684 aa10.38□□□□□ -0.75
NSMCE2-213ENST00000523824 CELF1Q92879 486 aaKnown RBP10.38□□□□□ -0.75
NSMCE2-213ENST00000523824 FAM89AQ96GI7 184 aa10.38□□□□□ -0.75
NSMCE2-213ENST00000523824 POLLQ9UGP5 575 aa10.38□□□□□ -0.75
NSMCE2-213ENST00000523824 DLG5Q8TDM6 1919 aa10.38□□□□□ -0.75
NSMCE2-213ENST00000523824 SLC10A3P09131 477 aa10.37□□□□□ -0.75
NSMCE2-213ENST00000523824 LMOD3Q0VAK6 560 aa10.37□□□□□ -0.75
NSMCE2-213ENST00000523824 SF3B3Q15393 1217 aaKnown RBP10.37□□□□□ -0.75
NSMCE2-213ENST00000523824 KIF4BQ2VIQ3 1234 aa10.37□□□□□ -0.75
NSMCE2-213ENST00000523824 CTU1Q7Z7A3 348 aaKnown RBP10.37□□□□□ -0.75
NSMCE2-213ENST00000523824 REM2Q8IYK8 340 aaPredicted RBP10.37□□□□□ -0.75
NSMCE2-213ENST00000523824 CSRNP1Q96S65 589 aa10.37□□□□□ -0.75
NSMCE2-213ENST00000523824 ZC3H12CQ9C0D7 883 aaKnown RBP10.37□□□□□ -0.75
NSMCE2-213ENST00000523824 ATP5J2-PTCD1G3V325 749 aa10.36□□□□□ -0.75
NSMCE2-213ENST00000523824 VIL1P09327 827 aaKnown RBP10.36□□□□□ -0.75
NSMCE2-213ENST00000523824 RPS8P62241 208 aaKnown RBP10.36□□□□□ -0.75
NSMCE2-213ENST00000523824 RTL5Q5HYW3 569 aaPredicted RBP10.36□□□□□ -0.75
NSMCE2-213ENST00000523824 ANKRD13DQ6ZTN6 518 aa10.36□□□□□ -0.75
NSMCE2-213ENST00000523824 PLBD2Q8NHP8 589 aa10.36□□□□□ -0.75
NSMCE2-213ENST00000523824 TBC1D16Q8TBP0 767 aa10.36□□□□□ -0.75
NSMCE2-213ENST00000523824 CDCA5Q96FF9 252 aa10.36□□□□□ -0.75
NSMCE2-213ENST00000523824 GGA3Q9NZ52 723 aa10.36□□□□□ -0.75
NSMCE2-213ENST00000523824 CHPF2Q9P2E5 772 aa10.36□□□□□ -0.75
NSMCE2-213ENST00000523824 LAS1LQ9Y4W2 734 aaKnown RBP10.36□□□□□ -0.75
NSMCE2-213ENST00000523824 ANKRD36CQ5JPF3 1778 aa10.36□□□□□ -0.75
NSMCE2-213ENST00000523824 RTL9Q8NET4 1388 aa10.36□□□□□ -0.75
NSMCE2-213ENST00000523824 DUOX1Q9NRD9 1551 aa10.35□□□□□ -0.75
NSMCE2-213ENST00000523824 LAMB2P55268 1798 aa10.35□□□□□ -0.75
NSMCE2-213ENST00000523824 IRS4O14654 1257 aaPredicted RBP10.35□□□□□ -0.75
NSMCE2-213ENST00000523824 ZBTB22O15209 634 aa10.35□□□□□ -0.75
NSMCE2-213ENST00000523824 DSG3P32926 999 aa10.35□□□□□ -0.75
NSMCE2-213ENST00000523824 TMPOP42166 694 aaKnown RBP10.35□□□□□ -0.75
NSMCE2-213ENST00000523824 SCARF1Q14162 830 aa10.35□□□□□ -0.75
NSMCE2-213ENST00000523824 KRT24Q2M2I5 525 aa10.35□□□□□ -0.75
NSMCE2-213ENST00000523824 ISCA1Q9BUE6 129 aa10.35□□□□□ -0.75
NSMCE2-213ENST00000523824 ANKIB1Q9P2G1 1089 aa10.35□□□□□ -0.75
NSMCE2-213ENST00000523824 ASTN2O75129 1339 aaPredicted RBP10.34□□□□□ -0.75
NSMCE2-213ENST00000523824 PDE4DIPQ5VU43 2346 aa10.34□□□□□ -0.75
NSMCE2-213ENST00000523824 UFL1O94874 794 aa10.34□□□□□ -0.75
NSMCE2-213ENST00000523824 NEUROD2Q15784 382 aa10.34□□□□□ -0.75
NSMCE2-213ENST00000523824 HDGFL1Q5TGJ6 251 aa10.34□□□□□ -0.75
NSMCE2-213ENST00000523824 ANGEL2Q5VTE6 544 aaKnown RBP10.34□□□□□ -0.75
NSMCE2-213ENST00000523824 RASAL3Q86YV0 1011 aa10.34□□□□□ -0.75
NSMCE2-213ENST00000523824 HDAC9Q9UKV0 1011 aa10.34□□□□□ -0.75
NSMCE2-213ENST00000523824 TAF1P21675 1872 aa10.34□□□□□ -0.75
NSMCE2-213ENST00000523824 CHL1O00533 1208 aa10.33□□□□□ -0.76
NSMCE2-213ENST00000523824 HSP90B1P14625 803 aaKnown RBP10.33□□□□□ -0.76
NSMCE2-213ENST00000523824 ZNF280AP59817 542 aaPredicted RBP10.33□□□□□ -0.76
NSMCE2-213ENST00000523824 FKBP1BP68106 108 aa10.33□□□□□ -0.76
NSMCE2-213ENST00000523824 PKN2Q16513 984 aaKnown RBP10.33□□□□□ -0.76
NSMCE2-213ENST00000523824 PRPF38BQ5VTL8 546 aaKnown RBP10.33□□□□□ -0.76
NSMCE2-213ENST00000523824 RSBN1LQ6PCB5 846 aaPredicted RBP10.33□□□□□ -0.76
NSMCE2-213ENST00000523824 AGBL3Q8NEM8 1001 aa10.33□□□□□ -0.76
NSMCE2-213ENST00000523824 HYPKQ9NX55 129 aa10.33□□□□□ -0.76
NSMCE2-213ENST00000523824 PODXL2Q9NZ53 605 aa10.33□□□□□ -0.76
NSMCE2-213ENST00000523824 DBF4Q9UBU7 674 aaPredicted RBP10.33□□□□□ -0.76
NSMCE2-213ENST00000523824 GGA1Q9UJY5 639 aa10.33□□□□□ -0.76
NSMCE2-213ENST00000523824 HPS5Q9UPZ3 1129 aa10.33□□□□□ -0.76
NSMCE2-213ENST00000523824 TBC1D8O95759 1140 aa10.32□□□□□ -0.76
NSMCE2-213ENST00000523824 TRIM28Q13263 835 aaKnown RBP10.32□□□□□ -0.76
NSMCE2-213ENST00000523824 RIC3Q7Z5B4 369 aa10.32□□□□□ -0.76
NSMCE2-213ENST00000523824 MYOZ2Q9NPC6 264 aa10.32□□□□□ -0.76
NSMCE2-213ENST00000523824 SEC31BQ9NQW1 1179 aa10.32□□□□□ -0.76
NSMCE2-213ENST00000523824 LRRC37AA6NMS7 1700 aa10.32□□□□□ -0.76
NSMCE2-213ENST00000523824 UBE2Q2LH0YL09 131 aa10.31□□□□□ -0.76
NSMCE2-213ENST00000523824 HOXB7P09629 217 aa10.31□□□□□ -0.76
NSMCE2-213ENST00000523824 USP17L8P0C7I0 530 aa10.31□□□□□ -0.76
NSMCE2-213ENST00000523824 TTLL12Q14166 644 aaPredicted RBP10.31□□□□□ -0.76
NSMCE2-213ENST00000523824 CCDC152Q4G0S7 254 aa10.31□□□□□ -0.76
NSMCE2-213ENST00000523824 ZBTB38Q8NAP3 1195 aaPredicted RBP10.31□□□□□ -0.76
NSMCE2-213ENST00000523824 ZNF296Q8WUU4 475 aaPredicted RBP10.31□□□□□ -0.76
NSMCE2-213ENST00000523824 POLR2AP24928 1970 aaKnown RBP10.31□□□□□ -0.76
NSMCE2-213ENST00000523824 PITPNM2Q9BZ72 1349 aa10.31□□□□□ -0.76
NSMCE2-213ENST00000523824 USP17L3A6NCW0 530 aa10.3□□□□□ -0.76
NSMCE2-213ENST00000523824 USP17L4A6NCW7 530 aa10.3□□□□□ -0.76
NSMCE2-213ENST00000523824 MOB2Q70IA6 237 aa10.3□□□□□ -0.76
NSMCE2-213ENST00000523824 USP17L1Q7RTZ2 530 aa10.3□□□□□ -0.76
NSMCE2-213ENST00000523824 CCDC146Q8IYE0 955 aa10.3□□□□□ -0.76
NSMCE2-213ENST00000523824 GMLQ99445 158 aa10.3□□□□□ -0.76
NSMCE2-213ENST00000523824 SCAF8Q9UPN6 1271 aaKnown RBP10.3□□□□□ -0.76
NSMCE2-213ENST00000523824 AKAP11Q9UKA4 1901 aa10.3□□□□□ -0.76
NSMCE2-213ENST00000523824 XDHP47989 1333 aa10.3□□□□□ -0.76
NSMCE2-213ENST00000523824 DDX60Q8IY21 1712 aaKnown RBP10.3□□□□□ -0.76
NSMCE2-213ENST00000523824 NF2P35240 595 aa10.29□□□□□ -0.76
NSMCE2-213ENST00000523824 TM4SF4P48230 202 aa10.29□□□□□ -0.76
NSMCE2-213ENST00000523824 GOLGA2Q08379 1002 aa10.29□□□□□ -0.76
NSMCE2-213ENST00000523824 PRAMEF18Q5VWM3 479 aa10.29□□□□□ -0.76
NSMCE2-213ENST00000523824 DUSP27Q5VZP5 1158 aa10.29□□□□□ -0.76
NSMCE2-213ENST00000523824 PODNQ7Z5L7 613 aa10.29□□□□□ -0.76
NSMCE2-213ENST00000523824 CCDC85AQ96PX6 553 aaPredicted RBP10.29□□□□□ -0.76
NSMCE2-213ENST00000523824 MYD88Q99836 296 aa10.29□□□□□ -0.76
NSMCE2-213ENST00000523824 COL4A1P02462 1669 aa10.28□□□□□ -0.76
NSMCE2-213ENST00000523824 GPR25O00155 361 aa10.28□□□□□ -0.76
NSMCE2-213ENST00000523824 PDE8AO60658 829 aa10.28□□□□□ -0.76
NSMCE2-213ENST00000523824 ATP2B4P23634 1241 aa10.28□□□□□ -0.76
NSMCE2-213ENST00000523824 MKRN3Q13064 507 aaKnown RBP10.28□□□□□ -0.76
NSMCE2-213ENST00000523824 RALBP1Q15311 655 aa10.28□□□□□ -0.76
NSMCE2-213ENST00000523824 NBPF9Q3BBW0 867 aa10.28□□□□□ -0.76
NSMCE2-213ENST00000523824 ANKRD18AQ8IVF6 992 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms