RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 LRP8Q14114 963 aa8.4□□□□□ -1.06
PCM1-219ENST00000523540 SND1Q7KZF4 910 aaKnown RBP eCLIP8.4□□□□□ -1.06
PCM1-219ENST00000523540 USP20Q9Y2K6 914 aa8.4□□□□□ -1.06
PCM1-219ENST00000523540 KCNMB2Q9Y691 235 aa8.4□□□□□ -1.06
PCM1-219ENST00000523540 C9orf172C9J069 976 aa8.39□□□□□ -1.07
PCM1-219ENST00000523540 ADH7P40394 386 aa8.39□□□□□ -1.07
PCM1-219ENST00000523540 MBTPS1Q14703 1052 aa8.39□□□□□ -1.07
PCM1-219ENST00000523540 XKR5Q6UX68 686 aa8.39□□□□□ -1.07
PCM1-219ENST00000523540 KRTAP19-1Q8IUB9 90 aa8.39□□□□□ -1.07
PCM1-219ENST00000523540 RGL4Q8IZJ4 473 aa8.39□□□□□ -1.07
PCM1-219ENST00000523540 GPR152Q8TDT2 470 aa8.39□□□□□ -1.07
PCM1-219ENST00000523540 CCDC87Q9NVE4 849 aa8.39□□□□□ -1.07
PCM1-219ENST00000523540 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.39□□□□□ -1.07
PCM1-219ENST00000523540 SELPP16109 830 aa8.38□□□□□ -1.07
PCM1-219ENST00000523540 MZF1P28698 734 aaPredicted RBP8.38□□□□□ -1.07
PCM1-219ENST00000523540 USP5P45974 858 aa8.38□□□□□ -1.07
PCM1-219ENST00000523540 PDE12Q6L8Q7 609 aaKnown RBP8.38□□□□□ -1.07
PCM1-219ENST00000523540 NBPF11Q86T75 865 aa8.38□□□□□ -1.07
PCM1-219ENST00000523540 EDEM1Q92611 657 aa8.38□□□□□ -1.07
PCM1-219ENST00000523540 KRTAP9-9Q9BYP9 154 aa8.38□□□□□ -1.07
PCM1-219ENST00000523540 KRTAP9-4Q9BYQ2 154 aa8.38□□□□□ -1.07
PCM1-219ENST00000523540 BIN2Q9UBW5 565 aaPredicted RBP8.38□□□□□ -1.07
PCM1-219ENST00000523540 PDGFAP04085 211 aa8.37□□□□□ -1.07
PCM1-219ENST00000523540 PCSK2P16519 638 aa8.37□□□□□ -1.07
PCM1-219ENST00000523540 PNMA5Q96PV4 448 aa8.37□□□□□ -1.07
PCM1-219ENST00000523540 POLIQ9UNA4 740 aa8.37□□□□□ -1.07
PCM1-219ENST00000523540 XYLBO75191 536 aa8.36□□□□□ -1.07
PCM1-219ENST00000523540 NRLP54845 237 aa8.36□□□□□ -1.07
PCM1-219ENST00000523540 DNM1Q05193 864 aaKnown RBP8.36□□□□□ -1.07
PCM1-219ENST00000523540 EHHADHQ08426 723 aa8.36□□□□□ -1.07
PCM1-219ENST00000523540 AAMPQ13685 434 aa8.36□□□□□ -1.07
PCM1-219ENST00000523540 TRIP4Q15650 581 aaPredicted RBP8.36□□□□□ -1.07
PCM1-219ENST00000523540 ILDR2Q71H61 639 aa8.36□□□□□ -1.07
PCM1-219ENST00000523540 NLRP13Q86W25 1043 aa8.36□□□□□ -1.07
PCM1-219ENST00000523540 CMTR1Q8N1G2 835 aaKnown RBP8.36□□□□□ -1.07
PCM1-219ENST00000523540 TRPM4Q8TD43 1214 aa8.36□□□□□ -1.07
PCM1-219ENST00000523540 NUDT16Q96DE0 195 aaKnown RBP8.36□□□□□ -1.07
PCM1-219ENST00000523540 CITED4Q96RK1 184 aa8.36□□□□□ -1.07
PCM1-219ENST00000523540 HYAL3O43820 417 aaPredicted RBP8.35□□□□□ -1.07
PCM1-219ENST00000523540 ELNP15502 786 aa8.35□□□□□ -1.07
PCM1-219ENST00000523540 GPLD1P80108 840 aa8.35□□□□□ -1.07
PCM1-219ENST00000523540 TXNRD3Q86VQ6 643 aa8.35□□□□□ -1.07
PCM1-219ENST00000523540 BHMTQ93088 406 aa8.35□□□□□ -1.07
PCM1-219ENST00000523540 SSBP4Q9BWG4 385 aaPredicted RBP8.35□□□□□ -1.07
PCM1-219ENST00000523540 A0A0A0MRY4 1105 aa8.34□□□□□ -1.07
PCM1-219ENST00000523540 NFKB1P19838 968 aa8.34□□□□□ -1.07
PCM1-219ENST00000523540 GJD3Q8N144 294 aa8.34□□□□□ -1.07
PCM1-219ENST00000523540 LENG1Q96BZ8 264 aaPredicted RBP8.34□□□□□ -1.07
PCM1-219ENST00000523540 GGNBP2Q9H3C7 697 aa8.34□□□□□ -1.07
PCM1-219ENST00000523540 TLR7Q9NYK1 1049 aaKnown RBP8.34□□□□□ -1.07
PCM1-219ENST00000523540 FRRS1LQ9P0K9 344 aa8.34□□□□□ -1.07
PCM1-219ENST00000523540 DCTN4Q9UJW0 460 aa8.34□□□□□ -1.07
PCM1-219ENST00000523540 BRPF3Q9ULD4 1205 aa8.34□□□□□ -1.07
PCM1-219ENST00000523540 RARAP10276 462 aa8.33□□□□□ -1.08
PCM1-219ENST00000523540 TRAPPC3LQ5T215 181 aa8.33□□□□□ -1.08
PCM1-219ENST00000523540 RAB44Q7Z6P3 723 aaPredicted RBP8.33□□□□□ -1.08
PCM1-219ENST00000523540 TTC9Q92623 222 aa8.33□□□□□ -1.08
PCM1-219ENST00000523540 UBAP1LF5GYI3 381 aa8.32□□□□□ -1.08
PCM1-219ENST00000523540 NDUFB5O43674 189 aa8.32□□□□□ -1.08
PCM1-219ENST00000523540 LILRB5O75023 590 aa8.32□□□□□ -1.08
PCM1-219ENST00000523540 DHX32Q7L7V1 743 aaKnown RBP8.32□□□□□ -1.08
PCM1-219ENST00000523540 RBCK1Q9BYM8 510 aa8.32□□□□□ -1.08
PCM1-219ENST00000523540 ZFATQ9P243 1243 aa8.32□□□□□ -1.08
PCM1-219ENST00000523540 SLC6A14Q9UN76 642 aa8.32□□□□□ -1.08
PCM1-219ENST00000523540 IGHA2P01877 340 aa8.31□□□□□ -1.08
PCM1-219ENST00000523540 NRG1Q02297 640 aaPredicted RBP8.31□□□□□ -1.08
PCM1-219ENST00000523540 PLAURQ03405 335 aa8.31□□□□□ -1.08
PCM1-219ENST00000523540 OR13H1Q8NG92 308 aa8.31□□□□□ -1.08
PCM1-219ENST00000523540 FAM129BQ96TA1 746 aa8.31□□□□□ -1.08
PCM1-219ENST00000523540 A6NHS1 94 aa8.3□□□□□ -1.08
PCM1-219ENST00000523540 SASH3O75995 380 aa8.3□□□□□ -1.08
PCM1-219ENST00000523540 MAPK1P28482 360 aa8.3□□□□□ -1.08
PCM1-219ENST00000523540 SHISA2Q6UWI4 295 aa8.3□□□□□ -1.08
PCM1-219ENST00000523540 UBE2OQ9C0C9 1292 aaKnown RBP8.3□□□□□ -1.08
PCM1-219ENST00000523540 DNAJB12Q9NXW2 375 aaKnown RBP8.3□□□□□ -1.08
PCM1-219ENST00000523540 KIF4AO95239 1232 aa8.29□□□□□ -1.08
PCM1-219ENST00000523540 PSAPP07602 524 aa8.29□□□□□ -1.08
PCM1-219ENST00000523540 TARSP26639 723 aaKnown RBP8.29□□□□□ -1.08
PCM1-219ENST00000523540 CCDC27Q2M243 656 aa8.29□□□□□ -1.08
PCM1-219ENST00000523540 C8orf34Q49A92 452 aa8.29□□□□□ -1.08
PCM1-219ENST00000523540 KRT25Q7Z3Z0 450 aa8.29□□□□□ -1.08
PCM1-219ENST00000523540 CACTIN-AS1Q8N1I8 211 aa8.29□□□□□ -1.08
PCM1-219ENST00000523540 PMEPA1Q969W9 287 aa8.29□□□□□ -1.08
PCM1-219ENST00000523540 TP53INP1Q96A56 240 aa8.29□□□□□ -1.08
PCM1-219ENST00000523540 ABI2Q9NYB9 513 aaPredicted RBP8.29□□□□□ -1.08
PCM1-219ENST00000523540 MMP20O60882 483 aa8.28□□□□□ -1.08
PCM1-219ENST00000523540 PDE3BQ13370 1112 aa8.28□□□□□ -1.08
PCM1-219ENST00000523540 TMCO4Q5TGY1 634 aa8.28□□□□□ -1.08
PCM1-219ENST00000523540 TMC7Q7Z402 723 aa8.28□□□□□ -1.08
PCM1-219ENST00000523540 FMR1NBQ8N0W7 255 aaPredicted RBP8.28□□□□□ -1.08
PCM1-219ENST00000523540 TTC16Q8NEE8 873 aa8.28□□□□□ -1.08
PCM1-219ENST00000523540 ELP3Q9H9T3 547 aa8.28□□□□□ -1.08
PCM1-219ENST00000523540 BTBD11A6QL63 1104 aa8.27□□□□□ -1.09
PCM1-219ENST00000523540 RAC1P63000 192 aa8.27□□□□□ -1.09
PCM1-219ENST00000523540 DNAJC14Q6Y2X3 702 aaPredicted RBP8.27□□□□□ -1.09
PCM1-219ENST00000523540 ZNF438Q7Z4V0 828 aa8.27□□□□□ -1.09
PCM1-219ENST00000523540 ASB16Q96NS5 453 aa8.27□□□□□ -1.09
PCM1-219ENST00000523540 GOLGA2P5Q9HBQ8 144 aa8.27□□□□□ -1.09
PCM1-219ENST00000523540 TMEM63CQ9P1W3 806 aa8.27□□□□□ -1.09
PCM1-219ENST00000523540 KRTAP4-8A0A0G2JLE6 195 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms